current user: public

If you have questions about the server, please let us know.

Query: gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .
# Score Template Links and tools%idFirst MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRPLast
1 -44.700sp|B1AJZ9|FHAD1_HUMAN Forkhead-associated domain-containing protein 1 OS=Homo sapiens GN=FHAD1 PE=2 SV=2  ali   21  1.................................................................MKAYLKSAEGFFVLNKSTTIGRHENSDLVLQSPDIDNHHALIEYNECSFVLQDFNSRNGTFVNECHIQNAVKLIPGDILRFGSAGLTYE. 92
2 -41.500sp|Q6ZNK6|TIFAB_HUMAN TRAF-interacting protein with FHA domain-containing protein B OS=Homo sapiens GN=TIFAB PE=1 SV=2  ali follow..  19  15.............................................................PTLGPSAFANVPPRLQHDTSPLLLGRGQDAHLQLQLPRLSRRHLSLEPYLEAFCLKALSRKGCVWVNGLTLREQVPLSTVNRVSFSGIQMLVR. 115
3 -40.800sp|P46013|KI67_HUMAN Antigen KI-67 OS=Homo sapiens GN=MKI67 PE=1 SV=2  ali   18  2.........................................................WPTRRLVTIKRSGVDGPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRLKHGDVITIIDRSFRYE. 98
4 -39.600sp|Q96CG3|TIFA_HUMAN TRAF-interacting protein with FHA domain-containing protein A OS=Homo sapiens GN=TIFA PE=1 SV=1  ali follow..  11  2.....................................TSFEDADTEETVTCLQMTVYHPGQLQCGIFQSISFNREKLPSSEVVKFGRNSNCHYTFQDKQVSRVQFSLQLFKKSFEIKNMSKKTNLIVDSRELGNKMDLPYRCMVRFGEYQFLME. 127
5 -38.700sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1 PE=1 SV=3  ali   13  2..............................EDTQAIDWDVEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMPDCSVALPFPSISKQHAEIEIWDKAPILRDCGSLNGTQILRPPKVVSHRLRDQELILFADLLCQYH. 131
6 -36.700sp|Q8N302|AGGF1_HUMAN Angiogenic factor with G patch and FHA domains 1 OS=Homo sapiens GN=AGGF1 PE=1 SV=2  ali   15  77............................QTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPQIGSLFIINPATIGREKDMEHTLRIPEVGVSKFHAEIYFDHQSYVLVDQGSQNGTIVNGKQILQPYVLEHGDEVKIGETVLSFH. 215
7 -33.200sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1  ali   26  12.......................................................................GGTRHRLPREMIFVGR-DDCELMLQSRSVDKQHAVINYDTDEHLVKDLGSLNGTFVNDVRIPEQITLKLEDKLRFGYDTNLF.. 96
8 -31.800sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1  ali   31  21................................................................TLKGGTILGTRSLKGTSYCLFGRLSGCDVCLEHPSVSRYHAVLQHRASGFYLYDLGSTHGTFLNKTRIPPRCRVHVGHVVRFGGSTRLF.. 122
9 -31.600sp|Q96EP1|CHFR_HUMAN E3 ubiquitin-protein ligase CHFR OS=Homo sapiens GN=CHFR PE=1 SV=2  ali   18  2..............................................ERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNLVSGDHCRIVVDSGQVTLEDT-STSGTVINKLKVKQTCPLQTGDVIYLVYRKNEPE. 113
10 -30.500sp|Q9Y4F5|K0284_HUMAN Protein KIAA0284 OS=Homo sapiens GN=KIAA0284 PE=1 SV=4  ali   26  12.......................................................................SGARHRLPRELIFVGRE-ECELMLQSRSVDKQHAVINYDRDEHWVKDLGSLNGTFVNDMRIPDQVTLKLNDVIRFGYDSNMY.. 96
11 -30.100sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1  ali   23  132..........................QEEQSRPPTAVSSPGGPARAPPYQEPPWGGPATAPYSLETLKGGTILGTRSLKGTSCLFGRLSGCDVCLEHPSVSRYHAVLQHRGPGFYLYDLGSTHGTFLNKTRIPPRCRVHVGHVVRFGGSTRLF.. 272
12 -29.900sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2  ali   16  13..............................PSRVQPSPGSVGTHQLASGGHHIEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNNYVSGKHACIFYDTKHYELLNY-SEHGTTVDNVLYEGTALLHHGSYIKLGCLQFVF.. 212
13 -27.900sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2  ali follow..  20  2....................................AAAANSGSSLPLFDCPTWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYLFGRNPDCDFTIDHQSCSRVHAALVYHKKRVFLIDLNSTHGTFLGHIRLEPHQQIPIDSTVSFGASTRAY.. 124
14 -27.700sp|P85037|FOXK1_HUMAN Forkhead box protein K1 OS=Homo sapiens GN=FOXK1 PE=1 SV=1  ali   23  71............................SGGSSGVSGDSAVAGAAPALVAAAAASVRQSPGPALARLEGR--EFEFLMRQPSVTIGRNSSQDLSMLSSFISRRHLQLSFQEPHFYLRCLGK-NGVFVDGAFQAPALQLPKQCTFRFPSTAIKIQ. 200
15 -27.500sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1  ali   22  25...............................................................................DEPIKIGRSVANNATFDCKVLSRNHALVDHKTGKFYLQDTKSSNGTFINSQRLSPPCEILSGDIIQFG........ 106
16 -26.700sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1  ali follow..  14  320.....................................EQELHKWQVLVDSITGMSSPDFDNQTLAVLRGRMV--RYLMRSREITLGRATKDDVDLSAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVLSKWRLSNNSVVEIASLRFVF.. 442
17 -26.100sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1 SV=1  ali follow..  19  230................................GALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSALLGRHRRADIPIDHPSCSKQHAVFQYRRVKPYIIDLGSGNGTFLNNKRIEPQYELKEKDVLKFGFSSREY.. 367
18 -21.900sp|O76064|RNF8_HUMAN E3 ubiquitin-protein ligase RNF8 OS=Homo sapiens GN=RNF8 PE=1 SV=1  ali follow..  21  3...............................................EPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKMISRNHCVLKQPEGQWTIMDNKSLNGVWLNRARLLRVYSIHQGDYIQLG........ 109
19 -21.600sp|Q5U651|RAIN_HUMAN Ras-interacting protein 1 OS=Homo sapiens GN=RASIP1 PE=1 SV=1  ali   10  42......................RRQQALSMAPGAADAQIGTADPGDFDQLTQCLIQAPSNRPYFLLLQGYQDAQDYVMTREQHVFGRGGNSDTFLNAPDILPRHCTVRAGPEHPAMVRPSRGAPVTHNGCLLLREAELHPGDLLGLGEHLFMYKP 190
20 -20.100sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3  ali   17  119...........................................................................YRLQLSVTEVGTLDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGASVFKFDP 202
21 -20.000sp|Q96JH8|RADIL_HUMAN Ras-associating and dilute domain-containing protein OS=Homo sapiens GN=RADIL PE=1 SV=5  ali   12  60......................RLRRTVSETSLSPVNALPAAAQGPEEPGPDAMRYSLYQSPHLLLLQGYSQQHDYVLNRDRHTVGQRTPSSISLSAPDILPLHCTIRRQAGRLVLEPIPGAH-ISVNFSEVGHRVVLHHGDLLSLGLYLLLFKP 208
22 -19.500sp|Q15058|KIF14_HUMAN Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1  ali   11  20.............................KEKFEQAEKRKLQETKELQKAGIMFQMDNHLPNLVNLNEDPQLSELYMIKEGTTTVGKNSSHDIQLSGVLIADDHCTIKNFGGTVSIIPVGEAK-TYVNGKHILEITVLRHGDRVILGGDHY--HP 151
23 -18.300sp|O60934|NBN_HUMAN Nibrin OS=Homo sapiens GN=NBN PE=1 SV=1  ali   21  4...............................................................LLPAAGPAGGEPYRLTGVEYVVGRKNCAILIENDQSISRNHAVLTANFSVTNLSQTNSKYGTFVNEEKMGFSRTLKSGDGITFGVFGSKFR. 107
24 -18.000sp|Q86UU1|PHLB1_HUMAN Pleckstrin homology-like domain family B member 1 OS=Homo sapiens GN=PHLDB1 PE=1 SV=1  ali   17  9.............................IGPGCQTQTMVQKGPLDLIETGKGLKVQTDKPHLVSLGSGRLSTALLPLEEGRTVIGSA-ARDISLQGPGLAPEHCYIENLRGTLTLYPCGNA--CTIDGLPVRQPTRLTQGCMLCLGQSTLRFNP 135
25 -17.600sp|Q8IW19|APLF_HUMAN Aprataxin and PNK-like factor OS=Homo sapiens GN=APLF PE=1 SV=1  ali follow..  22  5................................................................FELQPRDGGPRVALAPGETVIGRGP---LGITDKRVSRRHAILEVAGGQLRIKPIH-TNPCFYQSSKPNLWCYLNPGDSFSLLVDKYIFR. 99
26 -17.200sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1  ali   13  1...............................................................VNLNADPALNELLVY-KEHTLIGSANSQDIQLCGMGILPEHCIIDITSEGQVMLTPQKNTRTFVNGSSVSSPIQLHHGDRILWGNNFFRLNP 95
27 -17.200sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2  ali   16  4......................KLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSELYYIKDGITRVGRERRQDIVLSGHFIKEEHCVFRSDSRGVTLEPCEGAD-TYVNGKKVTEPSILRSGNRIIMGKSHV.... 141
28 -17.100sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5  ali   17  99...........................................................................YYIKDGITRVGQERRQDIVLSGAHIKEEHCIFRSERSNVTLEPCERSE-TYVNGKRVSQPVQLRSGNRIIMGKNHV.... 181
29 -16.700sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2  ali   17...............................................................................KDHTRVGADTSQDIQLFGIGIQPQHCEIDIADGDVTLTPKENAR-SCVNGTLVCSTTQLWHGDRILWGNNFFRINP 94
30 -16.600sp|Q96L93|KI16B_HUMAN Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2  ali   17  1.........................................................SELPHLIGIDDDLLSTGLYHLKEGQTYVGRDDASDIVLHGLDLESEHCIFENIGGTVTLIPLSGSQ-CSVNGVQIVEATHLNQGAVILLGRTMFRFHP 104
31 -15.900sp|O43896|KIF1C_HUMAN Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3  ali   14  11......................KLRKTEALRMEREALLAEMGVAVREDGGTVGVFSPKKTPHLVNLNEDPLMSELYHIKDGVTRVGQVDM-DIKLTGQFIREQHCLFRSIPQPVTLEPCEGAE-TYVNGKLVTEPLVLKSGNRIVMGKNHV--HP 150
32 -15.400sp|Q96L93|KI16B_HUMAN Kinesin-like protein KIF16B OS=Homo sapiens GN=KIF16B PE=1 SV=2  ali   17  171...........................................................................YHLKEGQTYVGRSTEQDIVLHGLDLESEHCIFENIGGTVTLIPLSGSQ-CSVNGVQIVEATHLNQGAVILLGRTNM.... 248
33 -15.200sp|Q8N302|AGGF1_HUMAN Angiogenic factor with G patch and FHA domains 1 OS=Homo sapiens GN=AGGF1 PE=1 SV=2  ali   25  2..................................................................................................GVSKFHAEIDHDLQSYVLVDQGSQNGTIVNGKQICDPYVLEHGDEVKIGETVLSFH. 65
34 -14.700sp|Q9P2P6|STAR9_HUMAN StAR-related lipid transfer protein 9 OS=Homo sapiens GN=STARD9 PE=2 SV=2  ali   14  4...........................................................................MALEDDVLSTG------YHLKGQWIERDHCTITSACGVVVLRPARGAR-CTVNGREVTASCRLTQGAVITLGKAKFRFNP 81
35 -14.500sp|Q9Y242|TCF19_HUMAN Transcription factor 19 OS=Homo sapiens GN=TCF19 PE=1 SV=2  ali follow..  19  26.............................................................................GAGCTYRLGHRADCDVALRPGLISGIHAELHAEPRGVSLED-HSSQGTLVNNVRLPRGLELSDGDLLTFGPEG..... 108
36 -14.400sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2  ali   18  165................................RVQPSPGSVGTHQLASGGHHIEVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNNYVSGKHACIFYDEKHYELLNY-SEHGTTVDN.......................... 266
37 -14.200sp|O96017|CHK2_HUMAN Serine/threonine-protein kinase Chk2 OS=Homo sapiens GN=CHEK2 PE=1 SV=1  ali follow..  18  104.........................................................................ANLECVNDNYWFGRDKSCEYCFDEPTYSKKHFRIFREVGPAYIEDH-SGNGTFVNTELVGKRRPLNNNSEIALSL....... 193
38 -13.300sp|Q15058|KIF14_HUMAN Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1  ali   14  218...........................................................................YMIKEGTTTVGKNSSHDIQLSGVLIADDHCTIKNFGGTVSIIPVGEAK-TYVNGKHILEITVLRHGDRVILGGDHY.... 295
39 -12.900sp|Q01167|FOXK2_HUMAN Forkhead box protein K2 OS=Homo sapiens GN=FOXK2 PE=1 SV=3  ali   20  1...........................MAAAAAALSGAGTPPAGGGAGGGGAGGGGSPPGGWAVARLEGRE---EYLMKKRSVTIGRNSSQDVSMHSSFISRRHLEIFTPGGDFYLRCLGK-NGVFVDGVFQRRGAP.................. 133
40 -12.800sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2  ali   18  209...........................................................................YYIKDGITRVGRERRQDIVLSGHFIKEEHCVFRSDSRGVTLEPCEGAD-TYVNGKKVTEPSILRSGNRIIMGKSHV.... 291
41 -12.700sp|P55196|AFAD_HUMAN Afadin OS=Homo sapiens GN=MLLT4 PE=1 SV=3  ali   15  1.........................................................................................................DLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGASHV.... 46
42 -12.700sp|O43896|KIF1C_HUMAN Kinesin-like protein KIF1C OS=Homo sapiens GN=KIF1C PE=1 SV=3  ali   17  216...........................................................................YHIKDGVTRVGQV-DMDIKLTGQFIREQHCLFRSGEVVVTLEPCEGAE-TYVNGKLVTEPLVLKSGNRIVMGKNHV.... 294
43 -12.600sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1  ali   10  165...........................................................................YYLKEHTLIGSAN-SQDIQLCGMGILPEHCIIDITSEGQVMLTPQKNTRTFVNGSSVSSPIQLHHGDRILWGNNHF.... 239
44 -12.600sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2  ali   167...............................................................................KDHTRVGADTSQDIQLFGIGIQPQHCEIDIASDGDVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHF.... 238
45 -12.200sp|Q7Z2E3|APTX_HUMAN Aprataxin OS=Homo sapiens GN=APTX PE=1 SV=2  ali follow..  21  21...............................................................LVRQDSRHQRIRLP-HLEAVVIGRGPETKI--TDKKCSRQQVQLKAEKGYVKVKQVG-VNPTSIDSVVIGKEVKLQPGQVLHM......... 103
46 -12.100sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5  ali   29  5............................................................................................................................TYVNGKRVSQPVQLRSGNRIIMGKNHV-FRP 37
47 -11.300sp|Q9P2P6|STAR9_HUMAN StAR-related lipid transfer protein 9 OS=Homo sapiens GN=STARD9 PE=2 SV=2  ali   13  168............................................................................................YHLKGQWIERDHCTITSACGVVVLRPARGAR-CTVNGREVTASCRLTQGAVITLGKAQK.... 225
48 -11.100sp|Q96JH8|RADIL_HUMAN Ras-associating and dilute domain-containing protein OS=Homo sapiens GN=RADIL PE=1 SV=5  ali   12  1.....................................................................................................RRQPLPDSGAGRLVLEPIPGAH-ISVNFSEVHRTVVLHHGDLLSLGLYYL.... 52
49 -10.900sp|Q96T60|PNKP_HUMAN Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens GN=PNKP PE=1 SV=1  ali follow..  15  2.....................................................GEVEAPGRLWLESPPGGAPPIFLPSDGQALVLGRGPLTQV--TDRKCSRTQVELVADTRTVAVKQLGV-NPSTTGTQELGLEGSLGVGDTLYL......... 95

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 2 0 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35