Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300
# Score Template Links and tools%idFirst MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRDLast
1 -5.160PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  16  5...........................................................................................................................................................................................KEKIQFSKIRSRS-MQQNKFRKAIVAILMPMILVVSFGCFGKFAIVKKVYE-VNDGFNIGSGLLAKFIK--------TLVMYFPFSILYFVGFFFLILFNLIEFWSGNNPVGYNEYD 116
2 -4.710HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  17  1.........................................................................................................................................................................................................MFEYILREIFLSVIAFLAGAG---VSAGVFAFVLVIGVVPRILRCSRIENIILIENVMICGAGNISSVLDT-VSNICGNIIIAIYGLCVGIVGCIAVALAE.. 113
3 -4.320PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  8  36....................................................................................................................TAGVRSADIEAKIRNDKNYANSEEYKKLMQERDESEAWARAATISFKADLNAEPATFVNQKTGKPAKVWIRTADVNYQSPRYFIAV-KSLCYFVMVVLLITVLVLSFKLIARFRNIFLMRN-----------------LKLIRIMAFSILAYYIIWWGITLVEVEIPFIFIIYEIFAIGVRMR-EENQ 234
4 -4.110HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;  ali follow..  14  1...................................................................................................................................................................................................MSTWSGIRNKLYLCPAL--IQYFATSYAAIRMDGVEVLRSDNQSIEKSLVSKNPLVRILALLDRRLGKRRLLALEESM--EQELDWVRAFYVIRMQAEG---LMEKE.. 171
5 -4.060HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  13  6.........................................................................................................................................................................................................YKRLIVMLVVVLAITCLMATTAFAAGTG-DVAGAVESTWSTASTQIKSVVDNVV-------FPAIDLILAVFFFAKLGTAGQFEWAAPAILFACLVFTLT... 104
6 -3.960HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  11  2........................................................................................................................................................................................TPYKVSHQLKKLNNSSSLKKNMTMELLGQLIAYLLQAVAVVVGFESDLLEVGACAEDVFVKYQMLMLMEVLTICKMFSLSAVFGSCRLAMIGVPLVANTILYYMSMSVAYGYMAIIG... 149
7 -3.940HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  19  29.............................................................................................................................................................................................SRRVMRRLPDRTRRISRLWTA----VCVVIGLLIFFRNKG---FSVLVSCFDGIFSD-------------VLARHEQLNNPHLLLPVAMVLI----------LLWGVGFAVRER. 112
8 -3.920PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  15  8........................................................................................................................................................................................................VEMYGTYFILGSFLLNLLLVLLLIIYNTTT---SNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEALDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLD 118
9 -3.890PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali follow..  21  206.....................................................................................................................................................................................AFSATVYESMQVFVPDTWSPFKVPFILSVFLLSIWLFLIVAL-AVLDDLFRQLTPAAAVFYLLGLMSSCIFCYFFF--ILMTHIYIGYLFLAFFIWVFAKKVHRNISYKYRCGHCGEKLKEK. 333
10 -3.870PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  10  59...........................................................................................................................................................................................ILRRKTRKVWPYAKLASERLSELNARLASIKSKSERRKYTKIVQIEEQFAAELKKLTRTEGQILVKLIH--RQTGVTTF------LIKNLRSGWRAFWYDTTAGLFD.......... 160
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Damiano JS, Stehlik C, Pio F, Godzik A., Reed JC. CLAN, a novel human CED-4-like gene. Genomics. 2001 Jul;75(1-3):77-83.