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current user: public |
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Query: gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 | |||||||
# | Score | Template | Links and tools | %id | First | MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH | Last |
1 | -3.470 | PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013; | ali follow.. | 10 | 1 | ....................................MKRNYFFTMLAAVLLAVAGANAQESAEFRPAELAGIWQL.................. | 39 |
2 | -3.380 | PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704] | ali follow.. | 10 | 25 | ...........ILANELARRTKVGG-------IFCFLIVPAALTVYFIAIYVGAANGAEWALNNPTYVHMNSWFHYAKLYAATAGCIGFMMLK | 99 |
3 | -3.330 | PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716; | ali follow.. | 13 | 1 | MPKKTDIAIAGPSFEDLKQ----TNAHGAEYWSARELQPLL.................................................... | 37 |
4 | -3.190 | PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694; | ali follow.. | 16 | 41 | LPKSGETRKQPTIKNEFINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDM---------CGNW.................... | 105 |
5 | -3.180 | PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708; | ali follow.. | 15 | 5 | IPEQLIRRLSDASR------------------LVPLALLAVVAAVIYVWRPLFHG--------LIYRVAYSPSLLILVGTTVVAGIALV.... | 67 |
6 | -3.160 | PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473; | ali follow.. | 12 | 8 | .......EAMEYEINKGAGNPLEFK--GLKSQYLFIFAGGLVAVLLVVVILYIAGVN.................................... | 55 |
7 | -3.060 | PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151; | ali follow.. | 8 | 2 | .......ATQAIDATIFASSHPDIAKRTSISGLLISCV-MLLIGILSFASTFELEDKS---------STVSMALMVFGTGLFLLGIFRLF... | 74 |
8 | -2.980 | PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205; | ali follow.. | 8 | 1 | MKEKESKSIIVYCFGSYMNYMRRQYEIMG--YRLPRAVTWRALGYFAAVEAGLVAFRFLPPF............................... | 60 |
9 | -2.740 | PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF | ali follow.. | 11 | 95 | ......QKTGKPAKVWIRTADVNYQSPRYFIAVKSLCYFVMVVLLITVLVLSFKLIARFRNSENIFLMRNLKLIRIMAFSILAYYIIWWG... | 178 |
10 | -2.710 | PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401; | ali follow.. | 9 | 1 | ........................................MDIGPCSIPTGEFLVGDGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYFE | 72 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review. |