current user: public

If you have questions about the server, please let us know.

Query: gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90
# Score Template Links and tools%idFirst MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWHLast
1 -3.470PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  10  1....................................MKRNYFFTMLAAVLLAVAGANAQESAEFRPAELAGIWQL.................. 39
2 -3.380PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]  ali follow..  10  25...........ILANELARRTKVGG-------IFCFLIVPAALTVYFIAIYVGAANGAEWALNNPTYVHMNSWFHYAKLYAATAGCIGFMMLK 99
3 -3.330PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716;  ali follow..  13  1MPKKTDIAIAGPSFEDLKQ----TNAHGAEYWSARELQPLL.................................................... 37
4 -3.190PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  16  41LPKSGETRKQPTIKNEFINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDM---------CGNW.................... 105
5 -3.180PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  15  5IPEQLIRRLSDASR------------------LVPLALLAVVAAVIYVWRPLFHG--------LIYRVAYSPSLLILVGTTVVAGIALV.... 67
6 -3.160PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  12  8.......EAMEYEINKGAGNPLEFK--GLKSQYLFIFAGGLVAVLLVVVILYIAGVN.................................... 55
7 -3.060PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  2.......ATQAIDATIFASSHPDIAKRTSISGLLISCV-MLLIGILSFASTFELEDKS---------STVSMALMVFGTGLFLLGIFRLF... 74
8 -2.980PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  1MKEKESKSIIVYCFGSYMNYMRRQYEIMG--YRLPRAVTWRALGYFAAVEAGLVAFRFLPPF............................... 60
9 -2.740PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  11  95......QKTGKPAKVWIRTADVNYQSPRYFIAVKSLCYFVMVVLLITVLVLSFKLIARFRNSENIFLMRNLKLIRIMAFSILAYYIIWWG... 178
10 -2.710PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  1........................................MDIGPCSIPTGEFLVGDGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYFE 72

FFAS is supported by the NIH grant R01-GM087218-01
1 4 3 9 1 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Alonso A, Sasin J, Bottini N, Friedberg I, Friedberg I, Osterman A, Godzik A., Hunter T, Dixon J, Mustelin T. Protein tyrosine phosphatases in the human genome. Cell. 2004 Jun 11;117(6):699-711. Review.