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Query: gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDYLast
1 -7.190PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  13  20.........................FLLNLLLVLLLIIYNTTTSNLKDK-VKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSLLDENNNGMIITIYGRSETVTYAKPVKDGKSNYSLSVEELQALQRAKENTIDTL................................................................................................. 170
2 -6.220PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]  ali follow..  6.........................SMMVIFTLLLGGMTHVQAQTSKAAXXXXXXXXXXXXXXXRLAKDAVMGEEAFNNAMQAITNRSFVLEANSVQPLNGRVYYVNSNTNFVSLNDGGITVQGSASNVQVKQENNGNVYLSMSVQGIFISATVNLVLYSGTNNAVTVDPN--FSGNNLTMNGTLLPYSDSNV..................................................................... 191
3 -5.280PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  20.................KDGKKLTKYHYFLLLFVLGVSFMLVSQIFSSEPSQEPAADQ-ASQKATSESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDI-----LETIIGVEIVVNVDATSLKIFEKNRKTQETST-------------------NETDKQGGKRTVSEMS--SDEEIVIIKNGDKETPVVVQTK............................................................ 182
4 -4.730HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  2.......................KTLKITFVMLMTALFLVLPSCSKDDVNVTLTPSEEVVNAFQQKYPDVKNVKWEILVGAYEAEFIYSGTYSENGQHIVLDKVEAQAY----TQGGKWVRSEFD--------------------VTKDYQDSSSLVVPRAVRETIAAKGKKVDDVKLFDWSDRNDY---------FYVEFDEPDSEL...................................................... 154
5 -4.070PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  2...................KTKFIYVVLMALFLGSQMTLSAQ-QRPTPEQMMQMQTNQMVRALMLDDATAAKFTPIYEKYLKELRECRMMNFK-----------------------------PRARKDAAQGTEANTAKETPKPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKI.......................................................................... 148
6 -4.060PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  10  107................................TVESLGKELKASAPEYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEASKLLADSDG---KVADNA...................................................................................................................................... 199
7 -3.950PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  11  2........................KTKLVAVIALIFCAFMAEASKVEGNGNIITKEISVYSGNNFWGNRSNKKFPVFKYTHGRSASLKITIDENLFPLLS------------IKSNNGRLAIRIQD-----------GTRIKPTQYVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISGSSVKFPHNVKLRLGEFSVSGSGDLVFADLDCKN-------------LTSKVSGSGDITLKGKADEARYS.......... 207
8 -3.630HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  10  2.......................KKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLR--NENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGI---DGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLL---------ANTYNSSYYGTVSATVPSGWLIPFTWIKVGRLITADDELAHVRLLVPHTYG............... 217
9 -3.510PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  1.....................................LTETQFKVQAEQQ----RLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTQDIEAM----GKKATFGNNITLTPDE........................................................................................................................................ 82
10 -3.410PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  19  12.................................................................................................................................................INPEDIES-QTILKDAAATALGANGVVLITTKSGRRGKTHIAFTAE....................................................................... 60

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.