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Query: gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRPLast
1 -4.850sp|O76015|KRT38_HUMAN Keratin, type I cuticular Ha8 OS=Homo sapiens GN=KRT38 PE=2 SV=3  ali   22  1..............................................................................................MTSSYSSSSCPAPGARNVSVSPIDIGCQPGAEANIAPMCLLANVAHANRVRVGSTPL.... 62
2 -4.820sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40 PE=2 SV=3  ali   17  61.......................................................................................EGDMVLSVAKLVPAGLHIYQSLGGDELTLCETEIADGEDINGVEVG-------GVHIQTGI....... 117
3 -4.520sp|Q96QU1|PCD15_HUMAN Protocadherin-15 OS=Homo sapiens GN=PCDH15 PE=1 SV=2  ali   15  34.....................................................................PTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPIETERNIFEN........................... 92
4 -4.520tr|E7EM53|E7EM53_HUMAN Uncharacterized protein OS=Homo sapiens GN=PCDH15 PE=4 SV=1  ali   15  34.....................................................................PTVSRTVELKSEPNVISSPAECSLELSPSRPCVLHSSLSRRETPICMLPIETERNIFEN........................... 92
5 -4.500sp|Q9Y597|KCTD3_HUMAN BTB/POZ domain-containing protein KCTD3 OS=Homo sapiens GN=KCTD3 PE=1 SV=2  ali   11  15..................................................STQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRE------------GSSRMGSRP 109
6 -4.420sp|O76014|KRT37_HUMAN Keratin, type I cuticular Ha7 OS=Homo sapiens GN=KRT37 PE=2 SV=3  ali   23  29.....................................................................................................................DVGCQPVAEANAASMCLLANVAHANRVRVGSTPL.... 62
7 -4.280sp|Q9H6K1|CF106_HUMAN Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2  ali   15  46..........................................................PPGVCLKYVGGDQFGHVNMVMVRSLEPQEIADVSVQMCSP----------------------SRAGMYQGQWRMCTATGLYYGDVIWV......... 111
8 -4.230tr|E5RHQ3|E5RHQ3_HUMAN Uncharacterized protein OS=Homo sapiens GN=NUDCD1 PE=4 SV=1  ali   12  4.................................................................................LQGWSMPAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTL......................... 52
9 -4.180sp|Q9C0C9|UBE2O_HUMAN Ubiquitin-conjugating enzyme E2 O OS=Homo sapiens GN=UBE2O PE=1 SV=3  ali   10  3...........................................................RRGYVRVQWYPEGVKQHVKETKLKLEDRS--RDVVRHMRSTDSQCGTVIDVNIDCAVKLIGTNC---VNSKDLQHIWPFMYGDYI-LGKVY..... 99
10 -4.130sp|Q86UB2|BIVM_HUMAN Basic immunoglobulin-like variable motif-containing protein OS=Homo sapiens GN=BIVM PE=2 SV=3  ali   17  162......................................................................................QEVEYWILIGE--SSRKHPAIHCKKWADIVTDLNTQNPEYLDIRHLERGLQYRKTKKVG.......... 218

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 2 0 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35