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Query: gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTGSVDRPDQNRGERSMKSPGLDLVRRTLDEARAAARARGQDAGRGRVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSAVVGHQIAEHARPTALNDGVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKITGPAAPSWRKGPRHIAGRGPRDTYGLast
1 -8.7103bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  14  74.........................................................................KSLDAHVAAFAEDLEFDLDGRALELEDLWINILGGSHASHIHPHSVISGTTYVSMPGGT--SALKLEDPR............................................ 143
2 -8.4102rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  12  78.........................................................................KSLDAHVAAFAEDLEFELDGKALRLEDIWINILGGVHGSHIHPHSVISGTTYVAMPEGT--SALKLEDPR............................................ 147
3 -7.4901tm3_I mol:protein length:64 chymotrypsin inhibitor 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDR---LDNIAQVPRVG....................... 64
4 -7.4901y3b_I mol:protein length:64 chymotrypsin inhibitor 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMSYRIDRVRLFVDR---LDNIAQVPRVG....................... 64
5 -7.4401lw6_I mol:protein length:64 SUBTILISIN-CHYMOTRYPSIN INHIBITOR-2A  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDK---LDNIAQVPRVG....................... 64
6 -7.4401ypc_I mol:protein length:64 CHYMOTRYPSIN INHIBITOR 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDK---LDNIAQVPRVG....................... 64
7 -7.4201ypa_I mol:protein length:64 CHYMOTRYPSIN INHIBITOR 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKAVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDK---LDNIAQVPRVG....................... 64
8 -7.4201y4a_I mol:protein length:64 chymotrypsin inhibitor 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTRSYRIDRVRLFVDR---LDNIAQVPRVG....................... 64
9 -7.4201y48_I mol:protein length:64 chymotrypsin inhibitor 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDAVRLFVDR---LDNIAQVPRVG....................... 64
10 -7.4101tm4_I mol:protein length:64 chymotrypsin inhibitor 2  ali model follow..  10  1.................................................................................................MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTGEYRIDRVRLFVDR---LDNIAQVPRVG....................... 64

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.