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Query: gi|15607164|ref|NP_214536.1| transcriptional regulatory protein WHIB-like WHIB5 (Rv0022c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAHPCATDPELWFGYPDDDGSDGAAKARAYERSATQARIQCLRRCPLLQQRRCAQHAVEHRVEYGVWAGIKLPGGQYRKREQLAAAHDVLRRIAGGEINSRQLPDNAALLARNEGLEVTPVPGVVVHLPIAQVGPQPAALast
1 -33.5005oay_A mol:protein length:94 Transcriptional regulator WhiB1  ali model follow..  22  16.KAVCRDDPELFFPVGNSGPAL----------AQIADAKLVCNRCPV--TTECLSWALNTGQDSGVWGGMSEDERRALKRRNARTKART.................................................. 92
2 -9.6903ask_A mol:protein length:226 E3 ubiquitin-protein ligase UHRF1  ali model follow..  181..............................GGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEW........................................................................ 217
3 -9.3004gy5_A mol:protein length:241 E3 ubiquitin-protein ligase UHRF1  ali model follow..  197..............................GGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEW........................................................................ 233
4 -8.5406g8r_B mol:protein length:198 Nuclear body protein SP140  ali model follow..  27  11....CRDGGELF----------------------------CCDTCSRVFHEDCHIPPVEAER--TPW........................................................................ 43
5 -8.4505hh7_A mol:protein length:233 Origin of replication complex subunit 1B  ali model follow..  10  7...KTKKKKRVYYNKVEFDETEFEIGDDVYVKRREDSNSDECDDCLGGFHLKCLKPPLK-EVPEGDW........................................................................ 91
6 -8.4403shb_A mol:protein length:77 E3 ubiquitin-protein ligase UHRF1  ali model follow..  33..............................GGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEW........................................................................ 69
7 -8.3704tvr_A mol:protein length:280 E3 ubiquitin-protein ligase UHRF2  ali model follow..  13  235....CGGKHE-------------------------PNMQLLCDECNVAYHIYCLNPPLDKVPAEEYW........................................................................ 272
8 -8.3304aup_A mol:protein length:123 PHOSPHOLIPASE A2 GROUP XIII  ali model follow..  52FLDSCKRH-DFGYRNYKKQHRFTEANRKRIDDNFKKDLYNECAK---WKGVACRKIANTYYDAVRTFGWL..................................................................... 123
9 -7.9703j6b_0 mol:protein length:93 54S ribosomal protein RTC6, mitochondrial  ali model follow..  15  57................................KVRTSVKKFCSDCYLVRRKGCKSNK-KHKQRQG.......................................................................... 93
10 -7.9504eht_A mol:protein length:276 Activator of 2-hydroxyisocaproyl-CoA dehydratase  ali model follow..  13  121MNDKCAAGTGRFLDVMAKI--EVDVSELGSISMNSQNEVSISSTCTVFAESEVISHLSENAKIEDIVAGIHTS.................................................................. 192

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.