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current user: public |
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| Query: gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . | |||||||
| # | Score | Template | Links and tools | %id | First | MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRP | Last |
| 1 | -44.600 | PF16697.5; E3FMY4_STIAD/31-122; Inner membrane component of T3SS, cytoplasmic domain | ali follow.. | 26 | 1 | ................................................................LVLSGPEAGSSHALTRAEYTVGKAPTCDIVLSDKTISRQHLKLEVRDEHVLAIDLDSRNGSFCEGLRFSQ-VELRPGSAITLGTTELKLVP | 90 |
| 2 | -34.600 | PF00498.26; Q8YS22_NOSS1/91-156; FHA domain | ali follow.. | 26 | 2 | ...................................................................................TIGRDRHNGICTYDKLLSRHHAAIKYENQGFLLIDFQSTNGSFVNGEPVYQPIILKDGDRVRLG........ | 66 |
| 3 | -29.300 | PF18221.1; Q2M051_DROPS/5-98; Mutator 2 Fork head associated domain | ali follow.. | 15 | 9 | .........................................................................AVLLQPDTVYRIGRNEAYEFCVADESMELFHAMAIVYRAG--VLRVNALMGKFVNGLENGN-VDISRKDAID-GKVKLRF.. | 85 |
| 4 | -25.500 | PF17913.1; A0A067R0U4_ZOONE/7-103; FHA domain | ali follow.. | 16 | 2 | ................................................................ILRCINNSHEPIVLHMEEVFIGRAPNTKI--TDKKCSRNQVSLCADSALEVRIKQVGPNTTGVNGFALKGTQVLRHGDKLEILLGQYIHI. | 93 |
| 5 | -15.000 | PF09480.10; PRGH_SALTY/16-388; Type III secretion system protein PrgH-EprH (PrgH) | ali follow.. | 15 | 2 | ...............................................................VRLLNSSLNGCEFPLLTGRFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFETDATEIILHELKEGNSESRSVQLNTPIQVGELLILIRP | 99 |
| 6 | -8.130 | PF02816.18; F1QU13_DANRE/798-997; Alpha-kinase family | ali follow.. | 12 | 95 | .........................................................PSNDIPYATLEEELLGDFVKYSVKDGKEINLMRRDSEAGQKCCAFQHWVYTQTEGNLLVTDMQGV-GMKLTDVGIATCKKGYKGFRGNCATSFID... | 188 |
| 7 | -6.290 | PF05022.12; B7PKZ9_IXOSC/491-563; SRP40, C-terminal domain | ali follow.. | 10 | 4 | ......................................................................................RVKPEAVNIDPKLRDNSFEAKAGARGSW--QVLRTVKGKDFRHEKTKKKRGTYSGGAIDMSVNSIRF.. | 73 |
| 8 | -6.270 | PF11766.8; G3ALS8_SPAPN/53-299; Cell-wall agglutinin N-terminal ligand-sugar binding | ali follow.. | 16 | 10 | ......................................................................QPLDTFTLDLPCVFKFITDEPYIALTVGSTEYAHCYFQAGEVFLSVKDSTDAHGTVFNAGGSSLDVDLQCSKKFTSGSNIISFY. | 109 |
| 9 | -6.060 | PF11969.8; A7S614_NEMVE/151-270; Scavenger mRNA decapping enzyme C-term binding | ali follow.. | 10 | 6 | .................................................................ILEKKAETERVVFEDGDPETGFVLLPDMKWDQQQVENLYLIAICHKRGISLRDLNEEHIPLLKGRDAIRTKYNVPHSQLRIY---VHYQP | 98 |
| 10 | -5.990 | PF15321.6; H2LJI8_ORYLA/8-111; ATPase family AAA domain containing 4 | ali follow.. | 10 | 9 | ................................KKSGGSKDLGPASVGPDFNPFAEKQNNPTAVGSKPSDDQTLTVHESSKSSNLLSDETFDDSALENEQTCRRHMKV-------------SRSGRFKEKRRPRSTLPI................. | 104 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print] |