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Query: gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRDLast
1 -11.000[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)  ali follow..  9  752.SSNSKNVAKKSADQPLSTLANTRERRSEYGQKRNVSGSRLAATPASKRKLSSKDVEQAADAPEVLTHSDNAVDVGIIDDECGGFGAVGVMNGVASPVANNSEMDTEAEVEAEPTATKAITIHCQQPVTTPVAAAATANERLPGVAPHRRGPRRADRREEELVASAPGYRCRPSMRGADAGAAAAAAAAPTHPHPHRP.......................................................................................................... 948
2 -10.200[K] KOG3915 Transcription regulator dachshund, contains SKI/SNO domain  ali follow..  9  1MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNECKMVDLR--------------KVASFTV-LICLPQAFDLFHLVGGLHTVYTKLKRL--------------------EITPVVCNVEQVRILRGLGAIQPGVNR----KL-ISRKDFE 273
3 -8.790[S] COG5373 Predicted membrane protein  ali follow..  10  35...........................................................................................................KAEIARLAKEGMGEPGPDLATGRPSEAGVPSVAGTEATADGPWSRAREGAGTSHDESAAGRESGDGAIDGPVAPSAAAARAESLESRIGGRWPVWVGGLALALGGYFL-LTLAAIFGLALGVAGEVIRRRDVPAIADRFRNAMIPGVLTAAGAVTFGVVYAAYGLALVSLATVGLSLLHGAGLGLLASLLTPL.... 258
4 -8.730[S] KOG2490 Predicted membrane protein  ali follow..  11  2................................GSNTSPGQADPLESENESSLTSRFLPNKRDGGKDNESVIPEKEEPDLNEPVLAVPLPKSRYALTKRSSSSEYPRRSASTSAKKNVIPITRSYSTTFFSKTNDQPTVTGNQDKPISRLRASKLQIQNFWNYICFELLANDTVPANPIKEKHVENFLATPYAIEKVDSFTLFPIRVLISFFTLLLIFSTSILFYVLYNVLEIADRLQDVLDCLFSNHILSFNFAISLAYMVLHTLVLLYQIITLNVTVAVLALLMSNQLVEIKGAVQLTCSD.. 371
5 -7.670[T] KOG3872 FOG: FHA domain  ali follow..  10  5EKRRRPPPQLQHSPYVRDQSNSQGMTKTPETSPPKRPMGRARSNSRSSGSRSNVDIDQYTIPPGLDLLPTASSPPSVHQVSQQQQLSPILANKIRSPFENQSQDQNDNSIDPTPAGQVTIPVEAVSPPALDELSKFQNGSTETLFRTGSPRKKHTHIIILKSLNATFETKF-GRPVTNSVNKNNSGSKRDLFSQQVRPDNGNFDSRVLS-----------ACLSCDPTSGKIY------IRDL----KSSNGTFVNGVKIRQNDVELKVGDTVDL-------------------GTDID..... 277
6 -7.560[S] KOG2129 Uncharacterized conserved protein H4  ali follow..  11  322.LSESESSLEMDDERYFNEMSAQGLRPRTVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTRAGMSYYNSPGLHVQHMGTSHGITRPSPRRSNSPDKFKRPTPPPSPNTQTPVQPPPPPPPPPMQPTVPSGSHLAAYSFATFGAHLLPALMHELSLNFKLGLIQWSRLLNAKGSFSGIFGYDLFALRLSRMQPWNTNQTTFSISVLL------CTSIPWLEPSLFGIW--FSSSVQFLLGPE......................................................... 579
7 -7.250[TZ] KOG3671 Actin regulatory protein (Wiskott-Aldrich syndrome protein)  ali follow..  11  341.PPIQQHPQMNQSWNQTPVRQYKPSFPSSAPIGSGASSYSTPAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSPKSAGGDARGDVMAQIRQGAQLKHV--------------AAGMGGLAGALAKALEEMGIDDTSDDDD----------STILDLKNYRIVNFQDKLS--VTNL................ 634
8 -7.120[K] KOG3766 Polycomb group protein SCM/L(3)MBT (tumor-supressor in Drosophila and humans)  ali follow..  9  672................................................SKPPIGESNPDSGHPKPARRRKRRKSIFVQKKRRSSAVDFTAGSGEESEEEDADAMDDDTASEETGSELRDDQTDTSSAEVPSARPRRAVTLRSGSEPVRRPPPERTRRGRGAPAASSAEEGEKCPPTKPEGTEDTKQEEEERLVLESNPWTVTDVVRFIKLT------LAKIFQEQDIDGQALLLLTLPTVQECME---------LKLGPAIKLCHQIERVKVAFYAQYAN........................ 894
9 -6.930[I] COG0170 Dolichol kinase  ali follow..  13  192................................................................................................................................................................................................FSRNDKGRTLLIYLLSACMYPRLFIEDVEYVSALI-SICFQDSAASIAGKWFGVTEKSIQGAIAISGTVVYFALYGRIDMLPFFIFAGSVEYL-NITIPLFAVLYFQAPEK. 309
10 -6.900[O] COG5264 Vacuolar transporter chaperone  ali follow..  11  1..............................................................................DLQEVYSHPEGSAGSRNVYIKRRNQRVLKQNMTPEPSQPSPLVNRLKANEMHPVSEEPEDNREVYRNEHGDHFNFRSIPGLLKPSTYGSFKHHGKTFVTPPHIKKPEIPLRVSGPIKVEAW--LHVVVLLSLALALYVVYTLLAIFIGFYAWKLHAK----------------SQMIKSRSPAPMTDYWG---LIVGTAL--AISLIVNMSFALKDAVYQNLIEPD 230
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Godzik A. NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1. Trends Biochem Sci. 2004 Mar;29(3):106-10.