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Query: gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRPLast
1 -38.300[T] COG1716 FOG: FHA domain  ali follow..  24  4.........................................AEIEDLAQKQVAVDLTQPSRFLLKVLAGANIGAEFHLSGKTYIVGSDPQADIVLSDMSISRQHAKIIIGDNSVLIEDLGSKNGVIVEGRKIEHQSTLSANQVVALGTTLFLLVD 120
2 -30.900[R] KOG1881 Anion exchanger adaptor protein Kanadaptin, contains FHA domain  ali follow..  23  134............................EQSRPTTAVSSPGGPARAPPYQEPPWGGPATAPYSLETLKGGTILGTRSLKGTSCLFGRLSGCDVCLEHPSVSRYHAVLQHNGPGFYLYDLGSTHGTFLNKTRIPPRCRVHVGHVVRFGGSTRLF.. 272
3 -25.800[T] KOG1882 Transcriptional regulator SNIP1, contains FHA domain  ali follow..  19  230................................GALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSYLLGRHRRADIPIDHPSCSKQHAVFQYRRVKPYIIDLGSGNGTFLNNKRIEPQYELKEKDVLKFGFSIREY.. 367
4 -24.500[T] KOG3872 FOG: FHA domain  ali follow..  16  129............................VSPPALDELSKFQNGSTETLFRTGSPRKKHTHIIILKSLNATFETKFLVVKPDGLKLGRPVTDNGNFDSRVLSRNHACLDPTSGKIYIRDLKSSNGTFVNGVKIRNDVELKVGDTVDLG........ 273
5 -20.400[T] COG3456 Uncharacterized conserved protein, contains FHA domain  ali follow..  14  2......................................................PEEKLQTLSLQVINGSELESGRAARTQQGNVGHAPECHWSVQDRQIPAQAFTVILHDGTFCLRP--QTAQLWLNQAK-SDLIQLRQGDEIQIGRLMVRVH. 107
6 -19.800[KT] KOG2293 Daxx-interacting protein MSP58/p78, contains FHA domain  ali follow..  14  604..............................................EQAAHSYMQRAIASRGAFAVLYGRY---KHYIKKPEVLVGRSTEDDIDLGGSKISRRQAIIRLGDGSFHIKNLGK-YSISVNEKEVDQSLILKSDCLVEIRGMPFIF.. 717
7 -14.200[D] KOG0615 Serine/threonine protein kinase Chk2 and related proteins  ali follow..  17  56.........................................................................SSIDLADDHFVCGRGSPTNFNFSTKFISKIQFSIDRDTETIYLHDH-SRNGTLVNHEMIGLSRELMNGDLISIAI....... 144
8 -7.180[R] KOG0130 RNA-binding protein RBM8/Tsunagi (RRM superfamily)  ali follow..  14  40............................SDSNTREAIHSYERVRNEDDDELEPGPQRSVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQ...................... 145
9 -7.110[H] KOG3159 Lipoate-protein ligase A  ali follow..  24  48..............................................................................NRPAVVIGRHQNPWIEVNIPYANKNNIQIVRRGGGTVYHDLGNLNISLLTTHA........................ 102
10 -7.030[E] COG0804 Urea amidohydrolase (urease) alpha subunit  ali follow..  16  14....................................................................GPTVGDKVRLADTELFI-TIHGEEVKFGGGKVIRDGMGQSQVSRAQGAVDTVITNALVVDAGAFKADIGLKDGRIAAIGK....... 100

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 2 0 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35