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Query: gi|15675978|ref|NP_273104.1| UDP-N-acetylglucosamine pyrophosphorylase (NMB0038) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMVGRVIDTAAALNPQNICVVIGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLSAEGRTLVLYGDVPLIDVETLETLLEAAGNEVGLLTDVPNDPTGLGRIIRDSNGSVTAIVEEKDADAVQKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLTELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNCIFEGDIELGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGCKTNFGAGTIIANYDGVHKHKTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVRPEKDKQLast
1 -137.000[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)  ali follow..  94  1MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIDTAAALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLYGDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDSSGSVTAIVEEKDADAAQKAVKEINTGILVLPNAKLEAWLNSLSSNNAQGEYYLTDLIAKAVADGIKIHPVQVRSSHLAAGVNNKLQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNCIFEGKIELGDNVEIGANCVIKNAKIGANSKIAPFSHLEGCEVGENNQIGPYARLRPQAKLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKHKTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDGKLALARSRQTIIDGWVRPEKNKQ 456
2 -43.500[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)  ali follow..  18  1.....MRAVLMAGGSGTRLRPDLPKPMVPILNRPIAEHIINLLKRHHITEVIATLHYLPDVLRDYFQDGGDFVEEDQPLGTAGCVKNIAELLDE--TFLVISGDS--ITDFDLGEAIAFHQSKATLILTRVPNPIEFGVVITDEAGKIKRFLEKP--STSEIFSDTVNTGTYILEPEVLEYLPSNTECDFSK------DLFPLLLAKDEPMYGYVAEGYWCDVGHLDAYREAQYD-----------GLDRKVKLDFAYRENSPGLWIGQNTYIDPSAHIEAPAVIGNNCRIGAR----------------------------------VQIEAGTVIGDNVTIGADANLKRPIVWNGAIIGEEAQLSACVISRGTRVDRRAHVLE-------ASVVGSLSTVGEEAQISPGVRVWPSKKIESGAILNINL.......................... 374
3 -38.500[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase  ali follow..  14  4....................................................................................................................................................................................................LQNIIETAFERRAEITPANADTVTREA-----------------------VNQVIALLDSGALRVAEKIDGQWVT----HQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGCAQIGKNVHLSGGGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGDIHYGRVPAGSVVVSGNL 238
4 -37.600[GMO] KOG1460 GDP-mannose pyrophosphorylase  ali follow..  15  6..EEKVVAVIMVGGKGTRFRPNIPKPLFPIAGQPMVHHPISACKRIPLAQIYLVGFYEEREFALYVSAPVRYLREDKPHGSAGGLYHFRNLIMEPSHIFLLNCDV--CCSFPLPKMLEAHRGYGGIGTLLVESASQFGELVADVTNELLHYTEK----PETFVSDRINCGVYVFTPEIFNAIGDVSTQRKDRATL-LDQDILSPLAGKKRLYTYETMDFWEQIK--SPGMSLRCSGLYLSQFRLTSPQLLASGDGTRSAIVIGDVYIHPSAKVHPTAKIGPNVSISANARVGPGVRLMSCIILDDVEIMENAVVTNAIVGWKSSIGRWSRVQAVTILGDSVAVEDEVVVTSSIVLPNKTLNV.............................................................................................. 407
5 -35.200[M] COG1209 dTDP-glucose pyrophosphorylase  ali follow..  18  1..MKMRKGIILAGGSGTRLYPAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPDTPRFQQLLGDNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDN--IFYGHDLPKLMEAAESGATVFAYHVNDPERYGVVEFDKNGTAISLEEK----PLEPKSNYAVTGLYFYDNDVVQMA--KNLKPSARGELEITDINRIYLEQGRLSVAMMGRGYA--LDTGTHQSLIEASNFIATIEERQGLKVS---------------------CPEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKDSN................................................................................................................................................ 293
6 -33.900[J] KOG1461 Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)  ali follow..  12  21.RRQRLQAILLADSFATKLLLERPNVLLPLVNIPMIDYTLAWLESAGIEEVFVFCSMQVIDYLNNSDWYVKTIESPQNSTSAGDALRYIYEQQ-QGDFVLVNGC--IVSNMPLTQLIQEHRDEKAIMTMVIRNPLTKQLLYYDEDNICFDKSLLDRNPSVLLCSDMQDCYIDICSLEVLSLFVDNFDYQHMRCDF-VEGVLADDIIGYKIFTHEISSCY--ASRIENFRSYDMVSKDIIQRRTFPYVPDMKFSGNRTLKLERQGIYKASDATQLPSAHVGASYVIGHATNIGSGTKILNSVIGNGCSIGSNVVIQGSYI-------------------NNVTVEDGCEIRNAIVCDEVK-----------VCAGAIVKPGVV-------------LSFKVVVGRDFVVPAYSQVSLLRQPMEEDSDEENLLSGV...................... 438
7 -32.400[J] KOG1462 Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1)  ali follow..  14  35.IPIEFQAVVFA-GFGNSLYPALPKALLPIGNKPMLHYPLYWLEAAGFTSAILICMEEAEAHINAWLRSEAPTILDDSKSSADALRAVSHLIKSQNDFVCLSCD--SIVGLPPIYGLDKFRLDNPSALAVYKEIDAKQLIGIEEKTSRLLYAKSSADVGSDFTFRMSDAHIFVFKHWVI-----DLIREKESISSIRGDLIPYLVKCQYQKSFTVRENIQRFLSSPNNIDNYDGGLSSQEIKINALIAKDGIICSRANIAKLTPEQRLVDVTVSERALVGADCMVNEGTTIKDNSNIKKSIIGKNCVIGKGVVVSNSILMDNIVVEDGVRLE-SCIVASGAQIGAKSKLRECEIGVDHRVEAGRIARGERLVDMEKI............................................................................... 463
8 -31.100[G] COG0448 ADP-glucose pyrophosphorylase  ali follow..  14  19..VKDTLVLILAGGRGSRLYDKRAKPALYFGGNRIIDFALSNCLNSGLNRIGVVTQYAAHSLLRHLQNGQQIDDSTWYRGTADAVYQNMAIIRDPKYILILAGDH--IYKQDYSQMLLDHIHSGAKCTVGCEKATEFGVMAVNENLKVKSFVEKPPAMVGKPNTSLASMGIYVFDADYLYDVLEREVSSPYTSHDFGKDILPKALEEG-VLYAHPFSRSCMGRNTEGERDVGTLDSFWQSNIDLVCENPQLDIYDQSWPIRGVQTYPSKFFYKKENARPVDNSLISGGCVITDAS-ISYSVLFDRIKINEGSQIDHCVVLPQVTIGKNCKLK-----------------------------------RCIIDRHSVIPDGMEIGVDLELDRQRFRVSSGGVVLVTP---SMLKKLNGEEVASEAHLD............................. 439
9 -29.400[M] KOG1322 GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase  ali follow..  12  81.DPKNVASIILGGGAGTRLFSKRAKPAVPIGGCRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFQGTADAVRQFIWVFENVEHVLILSGDH--LYRMDYMNFVQKHIESNADITVSCSRASDFGLLKIDQSGKIIQFSEKPKPKEAAESPYIASMGVYVFRKEVLLKLLRSSYPTSND---FGSEIIPLAVGEH-NVQAFLFNDYWEDIG-----------------TIGSFFDANLALTEQPPKF----------QFYDQKTPFFTSPRFLPPTKVDKCRILDSIVSHGCFLRECSV--------------------QHSIVGIRSRLESGVELQDTMMMGADFYQTEAEIASLLAEGKVPVGVGQ------NTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGI.......................... 503
10 -29.100[M] COG1213 Predicted sugar nucleotidyltransferases  ali follow..  17  1.....MEAVILAAGFGSRLGHEIPKALLKIGKRPLIYYTVQTLMENGIRDVVVVTGHKGYVLREYLSQKFVHNSLYKKTNNIYSLYLAMDHVSKG--FYILNSDV-LFHPGIFRELHSSTKENLILSVDTFKELGEEEMKVKIEDGVVKRISKQLNPSEADGE----YIGIARVEENIIDDLYNHVSRERKGRRVFYEEAFQSMMDDGIAVYYETTKGLP--IEIDTPADLMKARYEIYPKIQ..................................................................................................................................................................................................................... 240
11 -28.400[M] COG1210 UDP-glucose pyrophosphorylase  ali follow..  21  1MRKKVRKAVIPAAGLGTRFLPAQPKEMLPIVDKPAIQYIVEEAAESGIEDILIITGRNKRSIEDHFDRNIHYIRQKEPLGLGHAVLCAEHFIGDEPFAVLLGDDIMVSETPALRQLMDVYTEVVGVQSVLPEDVSKYGIINTSGSQEVNDLVEKPSPEEAPSEI--AVMGRYVLNSS-IFSVLKTIGR-GAGNEIQLTDALREVCRKE-PIHARLLEGNRYDIGDKLGCFKASTEIGLMRPEMRSQLLA----------YLEDVIKRETKEML....................................................................................................................................................................................... 296
12 -26.300[M] COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes  ali follow..  15  1.....MKAIILAAGLGTRLRPNTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDEKYGVRLVFNDKYADYNNFYSLYLVKEELANS--YVIDADN--YLFKNMFRNDLTRS----TYFSVYREDCTNEWFLVYGDDYKVQDIIVDSKAG-------RILSGVSFWDAPKIVSFIDKAYVSGEFVDLYWDNMVKDNIKELDVYVEELEGN--SIYEIDSVQDYRKLEEILKNE....................................................................................................................................................................................................................... 228
13 -24.100[H] COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase  ali follow..  15  1.....MLTLLMCGGKGTRLGRG-EKPLFEVCGMKLIDHSLLQYKDF---DVIAITSPHTPATESYLAEKGVEVYRAAGKGYIEDYSEACRELAINEPVIVASADIVYIRDIAFDIVDAYMKTIKPALTVVMEGEPVGVNIIDSL--LINTWQEEEIYSIEKDSVVNVNT-----DVERAERLWTTMRKERGWQR...................................................................................................................................................................................................................................................................... 180
14 -20.600[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase  ali follow..  20  2..........................................................................................................................................................................................................................................................................IDKSAFIHPTAIVEDGAVIGANAHIGPFCIVPQVEIGEGTVLKSHVVVNGTKIGRDNEIYQFASIPTRVEIGDRNRIRESVTIHRGTVQGGGL----TKVGSAHVAHDCTVGNRCILANNATLAGH-VSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHAT.............. 193
15 -19.200[I] COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase  ali follow..  14  8.STRRIVAVVPAAGIGSRMQMDKPKQYLHIHGKTILEHTLSVLLGYPIEKIILAVAANDPYISTCPLLTHPKIQSSRADSVLNGLNAVKSAVQNSEDFWVMVHDAPCLTHQDLDKLVQVEDQNGAILAIPATDT------RALHNQQIHYTEDRSQLWLAQTP--------QFFPIATLAQALEQALAQG----LQVTDEASAMEFAGFRPHLV--AGRSDNIKVTRPEDFALAEFYLSRT....................................................................................................................................................................................................................... 237
16 -18.900[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase  ali follow..  19  7.................................................................................................................................................................AELATITGGELFGDPTALVSAVAPMDKAQLGHVTFLSNPKYSKHLGDCKATVIMVKTSERELCPSNALVVADPYVAFAKVAQALDSTPSPAHGIAPSAVIAEDAKLGHNVSIGANAVIESGVQLGDNVVIGAGCFIKQARLGDNTKLWA-----NVTIYHKVEIGSDCLIQSGTVIGADVRIGDRVEIDDTVIEDNVIIDNQ-----LQIAHNVHIGYGSALAGGTVIA--STRIGKYCIIGGASVINGHIEIADGVTITGMGMVMRSIEEKGMYSSGIPLQTNKEWRK...... 315
17 -18.600[R] COG2068 Uncharacterized MobA-related protein  ali follow..  21  7.SRLKVGIVLLAAGRSSRMGGPN-KLLALFDGKPLVRRTAERALGSKASGTIVVTGHQRERVRAALSGDVTFADNPDANGLSTSLKAGIAYLPEDAGAMIVLGDMPGVVSGDLDRLIDAFRKAGGNSVVRASHQGKRGNPVLLPRALFPAIAHLEGDTGARHLVEAEGLDVVDVE......................................................................................................................................................................................................................................................................................... 182
18 -17.900[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase  ali follow..  23  1..MTNFTVIIPARYASTRLPG---KPLAEIAGKPMIAHVFEKAMQSGAKRVIVATDHEQATVARGFGAEVCMTSETHQSGTERLAEVVEKLGIAEDEIIVIQGDEPLIPPAIVRQVAEKYQVKMASLAVNITDPEEL-KVLTDHAGYVLPIPWHRDQFASLPKEKSTHIGIYAYRAGFIKQYIQWQPSVLEQIE--LEQL---VLWYGEKIHVELAREV-PPVGVDTAEDLEKVRSILEK........................................................................................................................................................................................................................ 258
19 -16.700[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily  ali follow..  18  12.........................................................................................................................................................................................................................................................................VVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDY-------------------GRLILEAGSNLQDGCIM------------------------HGYCDTDTIVHENGHIGHGAIL--------HGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGGEARQLLVGSPARVLRQ.......... 143
20 -14.000[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A  ali follow..  15  2....KHVNVLLAGGASRRFGEP--KAFVKWKGRMLYECAKEALG----EQTVIISRPEFIDRFQENGENEVYQDAEPFQGMG-GIYTAFKKTDGD--YTVLSCDTPLIQRRTMLELKRLMIAGADA-------------VVPISDGQVQPLI-----------------AIY-------KRIMPVLYDQLSEKRLRISDLLGRISVCYVQAENIG-ANPAEFININTRDDFSCLEEKSNSLKRD.................................................................................................................................................................................................................... 199
21 -13.700[Z] KOG3121 Dynactin, subunit p25  ali follow..  16  15............................................................................................................................................................................................................................................................................................................ETASGNKVSRHTVLQNIILNGKVIVQSGAIIRGDL---ANVRTGRYCVIGKNSV-PYKQFSKGIAFFPMHVGEHVFVGEGAVV--------SAATIGSYVYIGKNAIIGRRCVLKDCCVIEDGAVLPPEVSSYMRYTARGTIEGGQG......... 157
22 -13.500[M] COG1083 CMP-N-acetylneuraminic acid synthetase  ali follow..  16  2KIIMTRIAIIPARAGSKGIKD---KNLQLVGGVSLVGRAILAAQESGMFDQIVVTSDGENILKEATKYGAKPVARPESLAQSDTILHCLETLNISGTAALLQPTSPLRNALDIRNAMEILGGKYKSVVSACECEHHPYKSFTLEGTEVQPIHELTDFESPRQKLPKSNGAIYINDIQSLFE----------EKRFFIAPMRFYLMPTYRSID------------IDSTLDLQLAESLISKEF...................................................................................................................................................................................................................... 228
23 -13.400[R] COG0110 Acetyltransferase (isoleucine patch superfamily)  ali follow..  23  73..............................................................................................................................................................................................................................................................................................................................................................NIFLGNNFFANFDCVMLDVRIGDNCMLAPGVYTATHPIDPVARVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKK.......... 182
24 -12.700[M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog  ali follow..  14  1..MNDILFIIQARMGSTRLPG---KVLRPLGSNRLLDILVHRVRQSARDNLVIATSDKEDILEAHCIKQGFRVFRGSEERVLDRFVKVIEAV-KPSVIIRLTGDNPFVDPELLDVMIQAHFDQGSDYTYILNAPLGICGEVVNAN-LLIDISRIQALEDQYQE----HVTLYIRNHPALYRVQFEAPERFRAPQYRLT.................................................................................................................................................................................................................................................................. 195
25 -12.300[R] COG4801 Predicted acyltransferase  ali follow..  17  37....................................................................................................................................................................................................................................................................SGDMVIMGEGVAVSGDVVACSDTRIDMWSKMGSNVEVGNAYLGEFVSIEG-----KLTVEGDLDVGKEVKIKGGFVAKGWIVVRNPVPVKILIIPTGTKIEVIEVGGDAVVGNNCNLKAQSVETGNALILKGSIYSEGKINIGENSTIYGNLSSKGQVNIGRNTKVFGGIKAESVLLHENARVE............ 266
26 -12.200[M] COG0836 Mannose-1-phosphate guanylyltransferase  ali follow..  14  4.QSRKITPVLLAGGAGSRLRDQLPKQFQPLVGLSTYQQTLKRVGDKSLYSEPLVITNEDRRQAEEIDLPATVVLEPARRDSAAAMAAAAVLAEPGCLVLALAADHVVLDVDKFSEAVKADQGNIVVFGLVPTEPTSYGYIKPGDA-TVDAFVEKPDVTTAISYLEK-NSGNFLFRSDVMIAELKAFAPEESDLGFVRLHQASFEASPKNSIDYAVIEKTKRMAVVSDIGSWDAIWEIADKHDNDNALEGDGVFIDSEGCLIHSTQLLTTVVGAKDLVVVATKDAV........................................................................................................................................................................... 334
27 -12.100[G] KOG2638 UDP-glucose pyrophosphorylase  ali follow..  15  103SVLNKLVVVKLNGGLGTSMGCKGPKSLIGVNENTFLDLTVQQIEHLNKTYVLMNSFNTDEDTKKILQKYNHCRVKIYTFGHGDIYASFYNS-EGKEYIFVSNIDNLGATVDLLINPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKL-RLVEIAQVPKAHVKFKIFNTNNLWISLAAVKRLQEQ-GLNVIQLETAVGAAIKSFEN-----SLGINVPRSRFLPVKTTSDLLLVMSNLYSLNALRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANH--GDRIDIPPGAVLENKIVSGNLRILDH................................................................................................................................................. 508
28 -11.400[E] COG1045 Serine acetyltransferase  ali follow..  16  132....................................................................................................................................................................................................................................................................................................................................LQNQVSVTFQVDIHPAAKIGRGIMLDH---ATGIVVGETAVIENVSILQSVTLGG----TGKSGGDRHPK-IREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARI............. 243
29 -10.800[E] KOG4750 Serine O-acetyltransferase  ali follow..  17  171....................................................................................................................................................................................................................................................................................................................................IQNRVSESFAVDIHPGAKIGKGILLDH---ATGVVIGETAVVGDVSILHGVTLGG----TGKQSGDRHPK-IGDGVLIGAGSCILGNITIGEGAKIGSGSVVVKDVPARTTAVGNPARL............. 282
30 -9.690[G] COG4284 UDP-glucose pyrophosphorylase  ali follow..  14  99IGKGEVAVILMAGGQGTRLGSSQPKGCYDISKKSLFQIQAEKLIRLQDMVYIMTSGPTRAATEAYFQEHNYFGLNKEQIGNGGLYRAIKEN-RGIKHVYMYCVDNVLSKIAVFIGFAIKHGFELATKAVRKRDAHESVGLIATKNEKP-CVIEYSEISNELAEAKD-NIVNHYYLVDLLKRDLDQ-EPNGIKLEQFIFDVFDTVPLN--KFGCLEVDRCKEFSPLKNGPGSETSRLAYLKLGTSWLEDAGAIVKDGVLVEVSSKLSYAGE.......................................................................................................................................................................................... 458
31 -9.530[M] KOG2388 UDP-N-acetylglucosamine pyrophosphorylase  ali follow..  15  124VEARNAAFVLVAGGLGERLGYNGIKVALPRTGTCFLQHYIESILALQEASIIMTSDDTHSRTLDLLELNSYFGMKPTQVFSSMLVAATQLLCLKVFIQFLMEIHNSLMTSLASLGVSATKQYHVNSLAVPRKAKEAIGGISHVDGRSMVINVEYNQLDPLLRASGF-NINQLILELGPYKDELQKAFKSSTRLECMMQDYPKTL-PPTARVGFTVMDIWLAYAPVKNNPEDASGEMAIYRANSLILQKAGVKVEEPVKQVLNSTMAIKGRNVFIKDLSLDGALIVDSI---DDAEVKLGGLIKNNGWTMESVDYKDTSVPEEIRIRGFRFNKVEQLEKKLTQPGKFS............................................................................................................. 607

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24