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Query: gi|15675978|ref|NP_273104.1| UDP-N-acetylglucosamine pyrophosphorylase (NMB0038) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMVGRVIDTAAALNPQNICVVIGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLSAEGRTLVLYGDVPLIDVETLETLLEAAGNEVGLLTDVPNDPTGLGRIIRDSNGSVTAIVEEKDADAVQKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLTELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNCIFEGDIELGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGCKTNFGAGTIIANYDGVHKHKTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVRPEKDKQLast
1 -133.000IDP05540 gene: glmU; bifunctional protein [Clostridium difficile 630] CD3515 [Peptoclostridium difficile 630]  ali follow..  41  2....NFKAIILAAGKGTRMKSKYPKVIHKVCGKEMVNHIIDVSKKSGVKDTVVILGHEADVVKEKLAEEIIIAMQTEQLGTGHAVKMAKEYINDEDTIVVLCGDTPLIKEETLKRLFEYHKYHATVLTTRVGNPTGYGRIIRDKKGDLLKIVEQKDANSEEKMISEINSGIYCFNGKSLREALDLLNNNNSQGEYYLTDTAKIMRDKGLKVGAFAGSTIEELMGVNSRVELSKAEEIMRRRINESHMVNGVTIIDTNSTYIESDVMIGNDTIIYPGVMLQGKTRIGSDCIIGMNSSITNSEIGDGTEIKNST-IIDSKVGENSTVGPYAYLRPKSDLGNNVKIGDFVEVKNAIIEDGSKASHLSYIGDAHVGKNVNIGCGVVFVNYDGKNKFKSIVKDNAFIGSNSNLVAPVVVEEKGYIATGSTITHDVPDGALAIARERQVIKEGWVEKKNQKD 455
2 -133.000IDP01179 Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase ] BA_0048 [Bacillus anthracis str. Ames]  ali follow..  42  1..MSNRFAVILAAGKGTRMKSKLYKVLHPVCGKPMVQHVVDQVSQLGLQKLVTVVGHGAEMVQEQLGNVSEFALQAEQLGTAHAVDQAAGVLANEGTTLVICGDTPLITAETMEALLQQHGAMATVLTAYIEEPAGYGRIVRNENGHVEKIVEHKDANEKELAIKEINTGTYCFDNKALFASLSKVSNDNVQGEYYLPDVIEILKNEGHIVSAYQTEHFDETLGVNDRVALSQAEIIMKNRINRKNMVNGVTIIDPSNTYISADAIIGSDTVLHPGTIIEGNTVIGSDCEIGPHTVIRDSEIGDRTTI-RQSTVHDSKLGTEVSVGPFAHIRPDSVIGDEVRVGNFVEIKKTVFGNRSKASHLSYIGDAQVGEDVNLGCGSITVNYDGKNKFKTVIGNGVFIGCNSNLVAPVTVEDGAYVAAGSTITENVPSKALSVARARQVNKEDYVDQLLNKK 457
3 -133.000IDP00427 gene: glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YPO4119 [Yersinia pestis CO92]  ali follow..  54  1MSNSSMSVVILAAGKGTRMYSDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADSLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKEGGIGLLTVKLDNPSGYGRIVRE-NGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGKGSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAENELVISRVKQVHIQGWKRPVKKK. 456
4 -133.000IDP00356 gene: gcaD; hypothetical protein lmo0198 lmo0198 [Listeria monocytogenes EGD-e]  ali follow..  40  1..MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGDGVTLVVCGDTPLIEASTMEALLKYHRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVR-TSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYAKHLNHSK 457
5 -132.000IDP00318 gene: glmU; UDP-N-acetylglucosamine pyrophosphorylase CBU_1947 [Coxiella burnetii RSA 493]  ali follow..  48  2....GLSVIILAAGQGKRMASSTPKILHPLGGIPLLERVVNTARLLNPHTIHVVYGNGGSHVREKLNYPVHWIEQSQPLGTGHAVLQAIPFCQNEDRVLILYGDVPLISPKTLNSLLENTSNGLGVVVAELPDPTGLGRIIRDDFGNILSIVEHKDAEEHQLKIREINTGIMTTTAMNLKKWLPQLNNNNCQKEYYLTDTVALAVAEGCPVGGVAAQCCEEVQGVNDRWELTKLERYYQRLMAKKLSLAGVTIIDPERFDARGEIEIAPDVVIDVNVILEGNVQLDRNVRIGPNVILKNTTVGENTEIHANSVIEAAVIKANCSVGPFARLRPGSVLEEGAKVGNFVEMKKTTLGRGSKANHLTYLGDTIIGKNVNVGAGTITCNYDGANKWQTKIEDGAFIGSNVALVAPLTVGKNATIGAGSTLSQDAPPDQLTVARERQRTIKGWHRPTKKE. 455
6 -132.000IDP01477 gene: glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase VC2762 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  56  2....KFSTVILAAGKGTRMHSNMPKVLHTLAGKPMVKHVIDTCNNLGAQNIHLVYGHGGDQMQQALANNVNWVLQAQQLGTGHAVDQASPHFQDDEKILVLYGDVPLISEDTIESLLEAQTDGIALLTVVLEDPTGYGRIVRK-RGPVVAIVEQKDASEEQKLIKEVNTGVLVATGRDLKRWLAGLNNNNAQGEYYLTDVIAAAHDEGRAVEAVHPSHSIEVEGVNDRIQLARLERAFQARQAKKLLEQGVMLRDPARFDLRGTLQCGSDVEIDVNVIIEGNVSIGNNVVIGAGSILKDCEIDDNTVIRPYSVIEGATVGENCTVGPFTRLRPGAELRDDAHVGNFVEMKNARLGEGSKANHLTYLGDAEIGKGVNVGAGVITCNYDGANKHKTVIGDDVFVGSDCQLVAPVTIGNGATIGAGTTLTKNVAEGELVITRAPERKIAGWQRPAKKK. 453
7 -132.000IDP02698 gene: glmU; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT0387 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  47  2....GLSVVILAAGKGSRMNSNKPKVLQTLAAKTLIEHVVSSVEKLNPDNIVVVTGHLKEQVEDALQGNITFVYQQQQLGTGHAVLQALPYLKE-QKVLILYGDVPLISTEVLENLVDTTDDDLGVLTAFVENPQGLGRIVRDKFGAVTEIVEEKDANDIQRQIKEINTGIYCVHKNLLQKWLPEIKANNVQKEYYLTDIITFAKADHVSINVTHPINEFEILGVNDRTQLASLERVWQRNVAEKIMAKGVSIADPNRFDVRGNLDVGKDCWIDINVIIKGNVKLGNNVVIGANCILKNCIIEDNVRIKSNSMVDGSIIREGAIVGPFARVRPECDVKEGAVIGNFVEAKKTILGKGSKASHLTYLGDSEIGANCNIGAGVITCNYDGVNKHKTVIGDYAFIGSDSQLIAPVNIGQGATVGAGSTIVKDVPADNLAISRARQRHIDTWQRSVKKTD 454
8 -131.000IDP00656 gene: glmU; UDP-N-acetylglucosamine pyrophosphorylase SACOL0543 [Staphylococcus aureus subsp. aureus COL]  ali follow..  42  2....RRHAIILAAGKGTRMKSKKYKVLHEVAGKPMVEHVLESVKGSGVDQVVTIVGHGAESVKGHLGERSLYSFQEEQLGTAHAVQMAKSHLEDEGTTIVVCGDTPLITKETLETLIAHHNAQATVLSASIQQPYGYGRIVRNASGRLERIVEEKDATQAEKDINEISSGIFAFNNKTLFEKLTQVKNDNAQGEYYLPDVLSLILNDGGIVEVYRTNDVEEIMGVNDRVMLSQAEKAMQRRTNHYHMLNGVTIIDPDSTYIGPDVTIGSDTVIEPGVRINGRTEIGEDVVIGQYSEINNSTIENGACI-QQSVVNDASVGANTKVGPFAQLRPGAQLGADVKVGNFVEIKKADLKDGAKVSHLSYIGDAVIGERTNIGCGTITVNYDGENKFKTIVGKDSFVGCNVNLVAPVTIGDDVLVAAGSTITDDVPNDSLAVARARQTTKEGYRK...... 450
9 -115.000IDP90723 gene: glmU; UDP-N-acetylglucosamine pyrophosphorylase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0821 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  34  2....KTSILILAAGLGTRIKSQKPKVLQELCQKSMILHILKKAFALSD-DVSVVLSHQKERVEKEILEFPKTQILEQDLQNYPGTAGALSGFEPNERVLILCGDMPLVEQTSLEALLGNN-AKLNLAVFKARDPKSYGRVVIK-NDSVEKIVEFKDANTQEKEINTCNAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFV-DEDEFMGINDKFELSIAENFMQKKIKKYWMQQGVIFHLPQSTFIGADVEFVGECEVYENVRIEGKSKIINSIIK-------------------SSSVIENSIVENSDVGPLAHLRPNCEL-KNTHIGNFVECKNAKLN-TVKAGHLSYLGDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEVIIAAGSTVSINVEKGALFINRAGHKMIKDYYYKKFQK. 429
10 -38.000IDP01785 gene: dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [Coxiella burnetii RSA 493] CBU_0667 [Coxiella burnetii RSA 493]  ali follow..  13  7...............................................................................................................................................................................................................................IIEEAYQKDNFTTDTVPKKIHQAIHQTIELLDNGE------LRIAEKQNGQWNTNEWAKMAILLYFKTEPLKTFDAGYTFFYDKIPLKYTNNTSQPQSGVRVVPHAIVRKGAYLAPNTVLMPSYINIGAYVDSGTLIDTWATVGSAQIGKNVHLSGGGIGGVLEPLQAHPTIIEDDCFIGARSEIVEGVMVEKGSVISMGVFVGQSTPIYNRQTQEITYGRIPAGSVVIPGSL 236
11 -35.700IDP90675 gene: rffH; glucose-1-phosphate thymidylyltransferase [Yersinia pestis CO92] YPO3861 [Yersinia pestis CO92]  ali follow..  16  1.....MKGIILAGGSGSRLHPGVSKQLLPIYDKPMIYYPLSVLMLAGIRDVLIISTEDLPSFQRLLGNNLSYAAQPSPDGLAQAFIIGEAFIDNEPCCLVLGDN--IYFGQGFSPKLKAVQQGATVFGYQVMDPERFGVVEFDDNFRALSIEEK----PSQPKSNWAVTGLYFYDNQVVDFA--KQVKPSARGELEITSINQMYLDRGELTVELLGRGFA--LDTGTHDSLIEASTFVQTVEKRQGFKIAC-----------------------LEEIAWRNGWLDDDGVKRAATALAKTGYGKYLLDLLHARPRQ............................................................................................................................................ 292
12 -33.000IDP00571 gene: dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase YPO1041 [Yersinia pestis CO92]  ali follow..  12  14.....................................................................................................................................................................................................................................RRADITPANVDTVTREAITHVIDLLDTGALRVAEKI----DGQWVTHQWLKKAVLLSFRINDNQVMEGAETRYYDKVPMKFAGYDEARFQREGFRVVPPATVRKGAFIARNTVLMPSYVNIGAFVDEGTMVDTWATVGCAQIGKNVHLSGGGIGGVLEPLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSGNL 238
13 -30.000IDP00110 gene: glgC; glucose-1-phosphate adenylyltransferase NT01SF4145 [Shigella flexneri 2a str. 2457T]  ali follow..  16  15QLPLKSVALILAGGRGTRLKNKRAKPAVHFGGKRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGQRMKGENWYRGTADAVTQNLDIIRRYEYVVILAGDH--IYKQDYSRMLIDHVEKGARCTVACEEASAFGVMAVDENDKIIEFVEKPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAG-LAYAHPFPLSCVQSDPDAERDVGTLEAYWKANLDLASVVPELDMYDRNVQDRSGSHGMTLNSLVSGGCVISGQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARSEEGIVLVTREMLRKLGHKQER.............................................................................................. 431
14 -29.700IDP04623 glucose-1-phosphate adenylyltransferase [Bacillus anthracis str. Sterne] BAS4760 [Bacillus anthracis str. Sterne]  ali follow..  16  3.QKQKCVAMLLAGGKGSRLSKNLAKPAVPFGGKRIIDFTLSNCANSGIETVGILTQYQPLELHNYIGIGNAWDLDRVSTGTASAIYQNLNYLSQYEYVLILSGDH--IYKMDYSKMLDYHIEKEADVSISVDEASRFGIMNTNEEMEIVEFEEK----PQFPRSNLASMGIYIFNWAILKEYLEMDARNPESSNDFGKDVLPLLLDEGKKLMAYPFEGYWKDVGWEANMDLLRDETSLNLNDRDWRIYSVNPNEPPQYIAEKAKVE---ESLINEGCVIEGDVKLFQGVTVEEGSMVIDSVVMPGAKIGKNVVIERAIVGSEMVIEDGTIIRPEKNVDDVVLIAE............................................................................................................... 374
15 -29.400IDP05053 hypothetical protein CD0242 [Clostridium difficile 630] CD0242 [Peptoclostridium difficile 630]  ali follow..  17  2..PTTKTIVVNCAGRGSRLGLNSNKSLIDIDGKPLIIRQLECLDDY--DDIRIVVGFQAEKLIEVVCSMFVFNHDYLNTKTAASLSLGKKYSRDT--VISLDGDI-LFFKEDFDNFVNTDGEIIGVCQPYTKDPVYVKTDFINDGEFATEFSRTNGDYE--------WTGLFKIYSKNLS---------------SGTNHVYKMISPNLPLKIAHVE-----REIDTPEEYNEALKWYRNK....................................................................................................................................................................................................................... 213
16 -29.200IDP01254 glucose-1-phosphate thymidylyltransferase, putative BA_1228 [Bacillus anthracis str. Ames]  ali follow..  17  1.....MKGIILAGGTGSRLYPVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKHMGDVVSFLGSSFTYRVQDKAGGIAQALGLCEDFVGND-RMVVILGDN--IFSDDIRPYVEEFKEGAKVLLQSVDDPERFG-VANIQNRKIIEIEEK----PKEPKSSYAVTGIYLYDSKVFSYI--KELKPSARGELEITDINNWYLKRG-VLTYNEMSGWWTDAG--THVSLQRANALARDINFGKQFNG............................................................................................................................................................................................................... 244
17 -28.600IDP02130 putative sugar nucleotidyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1416c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  1.....MNAIILAAGFGSRLMPDQPKCMVEYKNKKIIDYEIEALKSAGINEIAVVGGYLNDVLKNYLNKNSKYDKTNMVHTFFCAKDFMLKCIEEKQDLIISYADI-VYFQDCVQKLINAKEELAIVVSKRFANPLEDAETLKMTNGYIIELGKKANAYDE---IEAQYIGLFKFSYQFLSEVIAFYEDNKNFENMYMTSFLQALIEKYNNAKAVEIDGN---CEIDFMSDLEVQIE............................................................................................................................................................................................................................ 252
18 -28.200IDP02824 gene: gtaB; UTP-glucose-1-phosphate uridylyltransferase [Bacillus anthracis str. `Ames Ancestor`] GBAA5152 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  2..KRVRKAIIPAAGLGTRFLPAMPKEMLPIVDKPTIQYIVEEAVKSGIEDIIIVTGKTKRSIEDHFDNDIHYIRQKEPKGLGHAVWCARKFIGDEPFAVLLGDDIVQAEKPCLRQLIEEYDKTIGVQTVPEDETHRYGIIDPLEQYQVRNFVEKPAAGTAPSNL--AIMGRYVLTPE-IFMFLEQQHV-GAGGEIQLTDAIQSLNEIQ-RVFAYDFEGKRYDVGEKLGFVQTTIEMALQHPELRDDMVTMMKKILEEQTNQES................................................................................................................................................................................................. 295
19 -28.200IDP01938 putative sugar-phosphate nucleotidyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1423c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  20  1.....MQAIILCGGLGTRLKSDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDKIKYSIEKEPLGTGGAIKETLKFVKN--EAYVLNGDT--FFDIDLSKL-KLNESKICLALKQMNDFDRYGTVNVDEQDLVISFEEKVFKKQG-----LINGGIYLLTKDIFNDF--------ALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYHFLINN............................................................................................................................................................................................................................ 221
20 -28.100IDP01685 gene: galU; UTP--glucose-1-phosphate uridylyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT0757 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  23  1..MKIRKAVFPVAGWGTRFLPSCPKEMLTVVDKPLIQYAVEEAIEAGCKEIIFVTSSNKKSLEDHFDRSFFFVRQPEALGLGHAVLCAKPLVGIE-DFAVILPDDLIYNHDCLKQMVKAVEGTIATQQVKREKTNSYGIVAKDNDNLIKAIVEKP--APEKAPSTNAVVGRYLLPNK-IFRCLESTSE-GAGGEIQLTDAIAKLLDQDEKILSYEFKGTRYDCGSKLGFLIANYEIALQHQELGHKFKEYLQ............................................................................................................................................................................................................ 285
21 -27.900IDP00828 gene: galU; UTP-glucose-1-phosphate uridylyltransferase SACOL2508 [Staphylococcus aureus subsp. aureus COL]  ali follow..  23  5.....KKAIIPAAGLGTRFLPAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRHKRAIEDHFDSNIFYVRQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETIGVQEVPEADTHRYGIIDPLTKNEVKKFVEKP--AQGTAPSNLAIMGRYVLTPE-IFDYLKTQKE-GAGNEIQLTDAIERMNNDN-QVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIK............................................................................................................................................................................................................ 284
22 -27.900IDP04015 UTP--glucose-1-phosphate uridylyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC0395 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20  1..MMIKKCLFPAAGYGTRFLPSMPKEMMPVVNKPLIEYGVDEAIQAGITGMCIVTGRGKHSIMDHFDMNFTFIRQREMKGLGHAILTGKELVGDE-PFAVVLADDLCVLAQMVALYKQFRCSIVAVQEVPENETHKYGVIIKDDLFRVDNMVEKP--EPGTAPSNLAIIGRYILTPD-IFDLIEQTEP-GKGGEIQITDALLKQAKAG-CVLAYKFKGKRFDCGSVEEATNFCYENMYKKNDQKVELAKKSTH........................................................................................................................................................................................................... 288
23 -27.800IDP90765 gene: galU; UTP-glucose-1-phosphate uridylyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1536c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  18  3.....QTCIFPAAGYGTRFLPTLPKEMLPILTKPLIHYGVDEALEAGMENMGFVTGRGKRALEDYFDITFTFTRQNQMKGLGDAVLKGRPLVGDE-AFGVILADDLCVMAQMVKIYEKYRCTIIAVMEVPKEQVSNYGVIVEENLIMVNSMIEKP--SPDEAPSNLAIIGRYILTPD-IFGILENTKA-GKNGEIQLTDALLTQATNG-MVLAYKFQGKRFDCGSVEGFVEATNYFYEKSK....................................................................................................................................................................................................................... 273
24 -26.100IDP91973 UTP-glucose-1-phosphate uridylyltransferase [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100000437 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  21  1MTSKVRKAVIPAAGLGTRFLPALAKEMLPIVDKPTIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSRLHFIRQTHPRGLGDAVLQAKAFVGNE-PFVVMLGDDLMLTKQLMDDYERTHASTIAVMPVPHDEVSAYGVIAPQGEGSVETFVEKP--APEDAPSDLAIIGRYLLTPE-IFQILENQAP-GAGNEIQLTDAIDTLNKTQ-RVFAREFNGARYDVGDKFGFMKTSIDYALKHPQVKDDLKNYLI............................................................................................................................................................................................................ 289
25 -24.000IDP06500 hypothetical protein spr0965 [Streptococcus pneumoniae R6] NP_358559 [Streptococcus pneumoniae R6]  ali follow..  14  5................................................................................................................................................................................................................................ISILDRLYSWIYIKKLKKLGAIIEENVVICFGAKLFFNEECLIQKDTVIGRFVLIENRITIGNNCLFFPRTLIETFSLGTRGKISKDCIFNKINIGREFWCNEAVRIGEGGWNQKSANI---------KIGDYQFIGPRAQIDSVELMGYGGLGIETMIFTHG-AEQNKVIIQKNVSILTRAIILPGVIVSQGTTVAANAIVTKSFPKHSLIGGVPARYIGQSNKEISVKEQ 247
26 -21.900IDP02428 O-acetyltransferase, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA3580 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  18  16..........................................................................................................................................................................................................................................................................................LSVGKNVLISKKASIYNP--------------GVISVGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGE-------------VGIEMYDFANISSRTIPNQYKNVKTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYIYVGVPVRKIKARKRKIVELEN 180
27 -21.400IDP01143 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative BA_4194 [Bacillus anthracis str. Ames]  ali follow..  19  94........................................................................................................................................................................................................................................................................................................................IEPGAIIRDHVEIGDNAVIMMNATINIGAVIG-----EGSMIDMNAVLGG-----RATVGKNCHVGAGALAGVIEPPSAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPARVIKEIDEKTKAKTE 228
28 -21.000IDP90556 gene: lpxA; UDP-N-acetylglucosamine acyltransferase YPO1056 [Yersinia pestis CO92]  ali follow..  22  2..........................................................................................................................................................................................................................................................................IDKTAFIHPSSIVEEGAIIGAGVYIGPFCIVSQVEIGAGTELKSHVVVNGTKIGCDNQIYQFASIPTRVEVGDRNRIRESVTIHRGTTQGGGV----TKVGCTHVAHDCVIGNRCILANNAALGGH-VEIDDYAIIGGMTAIHQFCVIGAHVMVGGCSGITQDVPPFVIAQGNHATP............. 194
29 -20.800IDP01449 UDP-N-acetylglucosamine acyltransferase VC2248 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  19  2..........................................................................................................................................................................................................................................................................IHETAQIHPTSVVEEGAIIGANVKIGPFCFVSKVEIGEGTELLSHVVVKGTKIGRFNRIFQFASIDTQLIIGDRNTIRESVTMHRGTVQDKGI----TIVGSAHVAHDCVIGDRCIFANNATLAGH-VKVGNQAIVGGMSAIHQFCHIGDHCMLGGGSIVVQDVPPYVMAQGNHCA.............. 193
30 -20.600IDP01019 gene: lpxA; UDP-N-acetylglucosamine acyltransferase STM0228 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  20  2..........................................................................................................................................................................................................................................................................IDKSAFIHPTAIVEDGAVIGANAHIGPFCIVPQVEIGEGTVLKSHVVVNGTKIGRDNEIYQFASIPTRVEIGDRNRIRESVTIHRGTVQGGGL----TKVGSAHVAHDCTVGNRCILANNATLAGH-VSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHAT.............. 193
31 -20.500IDP04483 gene: b2747; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase [Yersinia pestis CO92] YPO3361 [Yersinia pestis CO92]  ali follow..  17  6VSLPEVIAVLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQFSRLSVAQDPRISTVYGGDANSVMAGLQLAGQAEWVLVHDAARPCLHLDDLSRLLSICSQVGGILAAPVRDT----KRAEPGIQAIAHTVDRQDLWHALTP--------QLFPLELLKLCLSRALREG----VAVTDEASALEHCGYHPILV--TGRSDNIKVTRPEDLALAEFYLTQR....................................................................................................................................................................................................................... 233
32 -20.300IDP01633 gene: lpxA; UDP-N-acetylglucosamine acyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT1569c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  4................................................................................................................................................................................................................................................................SLAVVHESAKIADSAIIGPFCVIGKNVVIGENTELKSHVTIGDAVIGKNNRIFQYASIGDDPIDYTYKKGDFSQV----VIGDNNIIRECATIHGGTAKEIGV----TSVGNVHIGHDCKMGSYINLVNGVGLAGH-VHIDDYAILSSNVGVHQFCRVGKHAFIAHAALVGKDVPPYLMVTAVNAGSTPCG......... 193
33 -20.100IDP02564 gene: ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Bacillus anthracis str. `Ames Ancestor`] GBAA0084 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  2.....YTLIIPAAGQGKRMGAGKNKLFLLINEVPIIVHTLRAFEKDKCKNIIMAINEEERPYFEELMQKYPVEKPVQFIQGGDSVYNAIQHTTDVEYVLVHDGARPFVTNKVIQDVLTAAEKYGASICAVPVKDT----VKKVEQGVVVETVERSQLKAVQTP--------QGFSVSLLLEAHRSAKQSC----FLGTDDASLVERIGKQVGVV--EGSYYNIKVTTPEDLLIAESFLHVQ....................................................................................................................................................................................................................... 224
34 -19.800IDP01632 gene: lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT1571c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  18  5.................................................................................................................................................................DFLASKLDGEVKGDKNVEIKKIATLSQAGEGDISFCTNPKYLKALSETKASAVLITEEVLEFCNTNAVVLSNPYMALAKVMELFDKSPRPDGKIHSKAVIAASAIIGENVTIGANAVVGENVVIGDNVYIGACATINGTKIGNDTLIKS-----NVSIAHDVVIGTGCIIHQNAVIGCDVIIEDDVEIDDTIIKKGARIDNL-----VQIAHNVVIGRNTALAGVTAVA--STTIGDNCLIGGQSAITGHISICDNTIIGGASNIGKSITKPGMYYAAFEAKPRIQWGR...... 314
35 -19.700IDP90748 gene: lpxA; UDP-N-acetylglucosamine acyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0274 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  7.................................................................................................................................................................................................................................................................SAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGV----VIGKNATIREFATINSGTAKGDGF----TRIGDCHIAHDCLLGNNIILANNATLAGH-VELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFCLAEGNRAS.............. 190
36 -19.200IDP00661 acetyltransferase, putative SACOL0827 [Staphylococcus aureus subsp. aureus COL]  ali follow..  18  50.........................................................................................................................................................................................................................................................................................................................................................YKQLLNINIGNQSSIAYKVMLDIFTIGSNSVIGYNVTILTHE-FRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMI.......... 159
37 -18.900IDP00134 gene: VC2250; Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence VC_2250 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  19  7.................................................................................................................................................................AELATITGGELFGDPTALVSAVAPMDKAQLGHVTFLSNPKYSKHLGDCKATVIMVKTSERELCPSNALVVADPYVAFAKVAQALDSTPSPAHGIAPSAVIAEDAKLGHNVSIGANAVIESGVQLGDNVVIGAGCFIKQARLGDNTKLWA-----NVTIYHKVEIGSDCLIQSGTVIGADVRIGDRVEIDDTVIEDNVIIDNQ-----LQIAHNVHIGYGSALAGGTVIA--STRIGKYCIIGGASVINGHIEIADGVTITGMGMVMRSIEEKGMYSSGIPLQTNKEWRK...... 315
38 -18.900IDP06172 gene: lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Helicobacter pylori J99] NP_222903 [Helicobacter pylori J99]  ali follow..  16  4.................................................................................................................................................................SELLSAYSIETEFSNDFEVHALAELDKATPNDISYIDQVCYLKLLKDSKAGAVFIRKKESSKVPKSMQALIVDNPHLAFAKVSHAFKIPFF----KNPQSVNEPKHFEKVTIMPNVVIGEGVEIGENSLIYPGVVIDGVKIGKNCILYP-----RVILYQNTILEDNVIIHAGSVIGGDVRIQKNVEIGETLIKEGVKIDNL-----VQIGHNCVLGEHSIVVSQVGLS--STTTGRNVVFGGQVGIGGHLHVGEFTQIGGKSAVGKDLPPNTNFAGAIPAMEIHEWHH...... 309
39 -18.800IDP01928 gene: lpxD1; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT0286c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  21  40......................................................................................................................................................................................LTLIDKQEHIKLWQNSKATAAIVSKKISKELAQVNDKPLIVVNNADLAMAKILELFSVPYPEQ---NGIH----EKAIIDPTAKIGKNVSIGPSAYIGKNVEIGDNTIIYANVCINDAKVGTNCIIWP-----SVIIRDRTIIGHFCRLCSNCSIGSDVVIGSFVDIGSTIIGDYTKIDNL-----VQIGHNVIIGKGCMICGQAGIS--SVTIGDGVIIAGNAGIKDHTNIGSDARIGGKAGVMWDVPAGESHMGYPAYKDSELAKQWIAIRK 328
40 -18.800IDP90874 gene: lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Yersinia pestis CO92] YPO1054 [Yersinia pestis CO92]  ali follow..  17  7.................................................................................................................................................................ADLAQQLDAQVHGDGDLVITGIASMHSAQPEQITFLSNSRYREQLASCNAGAVVLTEADLPFCKVAALVVENPYFTYARMAQIMDTTPQPAQDIAPSAVISPQATLGEGVSVGANAVIESGVVLGDNVVIGAGCFIKNTHIGAGSRLWA-----NVSIYHEVVIGQNCLIQSGTVIGADVHIGDRVEIDNTIIGNGVIIDNQ-----CQIAHNVVIGDNTAVAGGVIMA--SLKVGRYCMIGGASVINGHMEICDKVTITGMGMVMRPITEPGLYSSGIPLQPNKMWRK...... 315
41 -18.500IDP90716 gene: lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0576 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  11.........................................................................................................................................................................SLEYKGEDIEISALNSLLKANFTELTYCDGEKNTKDIPHTGAAAILVSKEYENLVPKDTKALITQSPHLSFAFLSKLFAK-----PLISTAKEKVQNIAKSARIMPNVYIGDNVNIGENVIIMAGAYIDNVSIGDESIIHP-----NVVIYNDTKIGKKCHLLANCVIGSDVVLEDFVEVDSTIIKAGTKVDNL-----VQIGHNCNIGQNCIIVAQTGIS--SSELGRNVIMGGQSATSGHLKIGDFSTIAARGGVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAI 313
42 -18.400IDP02750 transferase hexapeptide domain-containing protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5389 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  17  55...................................................................................................................................................................................................................................................................................................................................................RMKVGKKTSFALMVMPDIMFPEKIT------VGDNSIIGYNTTLLAHE-YRLGEIVIGNEVMIGANTTILPGVRIGDGAIVSAGTLVHKDVPSGAFVGGNPMRVIYTKEQMEAREGS 169
43 -18.400IDP00651 gene: cap5H; capsular polysaccharide biosynthesis protein Cap5H SACOL0143 [Staphylococcus aureus subsp. aureus COL]  ali follow..  21  11.....................................................................................................................................................................................................................................................................................LLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIR------NSHIGEYSYIGFGSDF-NNVEVGRYCSISDVKIGLG---KHTHFFSSSPIFYSNNNPFNIKQKFID-DQPSRTTIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIEK. 181
44 -18.300IDP90521 3-deoxy-manno-octulosonate cytidylyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC1875 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20  2....SFTVVIPARYQSTRLPG---KPLADIGGKPMIQWVYEQAMQAGADRVIIATDDEREQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVVQGDEPLIPPAIIRQVADNLAACSAPMATEVFNPNAV-KVITDKSGYALYFSRAAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEKIE--LEQL---VLWHGEKIHVAVALE-APPAGVDTPEDLEVVRRIVAER....................................................................................................................................................................................................................... 250
45 -18.200IDP90579 gene: ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC0528 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  1..MNNMTAIVPAAGVGSRMQADRPKQYLTLLDKTVLEHTVEHLLEHPLIEHVVVAVSADDPYFANLPLAHHPRVIRVDGGKADSVLSALEYVCQHRLVLVHDAARPCVTHADITQLITTAHPIGAILASPVRDT------RGDHLQQIVHTVDRTALWHALTP--------QMFRAQSLRERLFAALQQQ----VTITDEASAFEWRGEKPALV--AGRADNLKITQPEDLALAEFYLSRNKEKS................................................................................................................................................................................................................... 232
46 -18.100IDP05257 putative transferase [Clostridium difficile 630] CD2748 [Peptoclostridium difficile 630]  ali follow..  20  11.........................................................................................................................................................................................................................................................................LIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDE-------------------GPITIGENTNIQDCSIVHGD--------------------------TETIIGNNVTVGHRSIV--------HGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITKKFPPGVLIMGSPGKVVRE.......... 140
47 -18.000IDP00043 acetyltransferase, CYSE/LACA/LPXA/NODL family BA_2629 [Bacillus anthracis str. Ames]  ali follow..  18  15....................................................................................................................................................................................................................................................................................................................QNVHFIKNTITKANILVGDYSYYDAKDGEGDRLIIGKFCCIASGVTFIMNGANHMDGFSAYPFNIFGNGWEKYTPNLSDLPYKGDTVIGNDVWIGMDATIMPGIKIGDGAIIAAKSVVTRDVAPYTIVGGNPANKIRERFSNAIIEE. 175
48 -18.000IDP02355 gene: kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase [Yersinia pestis CO92] YPO1400 [Yersinia pestis CO92]  ali follow..  19  2....SFIAIIPARYASTRLPG---KPLADIAGKPMVVHVMERALASGADRVIVATDHPDVKAVEAAGGEVCLTRADHQSGTERLAEVIEHYGFADDDIIVVQGDEPLVPPVIIRQVADNLAACSAGMATEAFNPNAV-KVVMDAQGYALYFSRAAQSKETIGDCFLRHIGIYAYRAGFIRRYVNWAPSQLEQIE--LEQL---VLWYGEKIHVAVA-KAVPAVGVDTQSDLDRVRAIMLNQ....................................................................................................................................................................................................................... 250
49 -18.000IDP02441 gene: kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase [Francisella tularensis subsp. tularensis SCHU S4] FTT1478c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  23  1..MANIHIVIPARLKSTRLPN---KMLADIAGKPMIQRVYEQVTKSKFDSIIIATDSQKKDIAKSFGAKVVLTRDDHQSGTDRIAEAVSKLGFADEDIVVVQGDEPLIPIENIEQAAQKSEAVVSTLCEKITDVEDI-KVVFDKNNYALSIPFERGFSEKEQINIS-HIGIYAYRVAFLKHYAELTVSPIEKYE--LEQL---VLYNGYKIAIEQS-AKSTPAGVDTLQDLEKVRKLFN......................................................................................................................................................................................................................... 249
50 -17.700IDP93935 chloramphenicol acetyltransferase [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA27919 [Yersinia enterocolitica subsp. enterocolitica WA-314]  ali follow..  16  12...........................................................................................................................................................................................................................................................................................................QCKHPMAGFNQVCFIKNTTQNPNIIIGDYTYYDDPQDSGDKLIIGKFCALAHGVKFIMNGANHMSGLSTYPFNIFGNGWERVAPSRDELPYKGDTHVGNDVWIGYDVLIMPGVTIGNGAIISSRSVVTRDVPAYSVVGGNPATLIKNRFSAEVIGK. 182
51 -17.700IDP91097 gene: kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase CBU_0479 [Coxiella burnetii RSA 493]  ali follow..  21  3.GKMEFRVIIPARFDSTRLPG---KALVDIAGKPMIQHVYESAIKSGAEEVVIATDDKRRQVAEDFGAVVCMTSSDHQSGTERIAEAAVALGFEDDEIIVLQGDEPLIPPDAIRKLAEHDNVKVASLCTPITEVDELFKVVLNRRNYALPIPWGRDTFSDKENLQL-HVGIYAYRVGFLEEYLSWDACPAEKME--LEQL---ILWHGGRIHMVVA-KSKCPPGVDTEEDLERVRAYF.......................................................................................................................................................................................................................... 253
52 -17.600IDP00947 gene: kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase STM0988 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  18  2....SFVVIIPARFSSTRLPG---KPLVDINGKPMIVHVLERARESGAERIIVATDHEDARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVVQGDEPMIPAVIIRQVAEQRQVGMATLAVPIHSAEEA-KVVLDAEGYALTIPWDRDRFAKSLETVG-HLGIYGYRAGFIRRYVSWQPSPLEHIE--LEQL---VLWYGEKIHVAVA-KAVPGTGVDTADDLERVRAEMR......................................................................................................................................................................................................................... 248
53 -17.500IDP91546 gene: vat; acetyltransferase [Staphylococcus aureus] AAA26683 [Staphylococcus aureus]  ali follow..  16  21....................................................................................................................................................................................................................................................................................................................RNLQFIKPTITNENILVGEYSYYDSKRGEGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIVGGNPLKFIRKRFSDGVIEE. 180
54 -17.500IDP91088 gene: kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase [Burkholderia mallei ATCC 23344] BMA_2275 [Burkholderia mallei ATCC 23344]  ali follow..  18  3.SPLPFVAVVPARLASTRLPN---KPLADLGGKPMVVRVAERAREAGAQQVLVASDAQRLDAVREHGFDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVVQGDEPLIDPQLVRDVAAHPSCAIATAAHPIHEAHEV-KVVLDAHGVALPIPWSRDAYLPHWPNVA-HIGLYAYRARFLRTYPTLAQAPIEAAE--LEQL---AMWHGERIAVRVT-EHAPEAGIDTPADLERVQALFRSR....................................................................................................................................................................................................................... 261
55 -17.400IDP00339 gene: ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FTT0711 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  1..MSNKYVIIPAAGIGTRMQLDIPKQYYKLNGKTILDNTLVKFIDNPFDKIFVAIAASDNFWNNSLYYNHDKIV-ETRFNSVYNALKVIDERKNDDWVFVHDAARPCVSIDSIIDLYEQSHSQAGILAVRAYET-----VKQVTKNIVVKTLARNNIWLAQTP--------QLSRLGQLEKAFDFCYSNNLVAK--VTDEASALEMFGINPIVV--ECSKKNIKITTKDDLEYANWQL.......................................................................................................................................................................................................................... 228
56 -17.100IDP91096 gene: kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase [Burkholderia pseudomallei K96243] BPSL0876 [Burkholderia pseudomallei K96243]  ali follow..  18  18.SPLPFVAVVPARLASTRLPN---KPLADLGGKPMVVRVAERAREAGAQQVLVASDAQRLDAVREHGFDAVLTRADHPSGTDRLAEVAAKLGFDDDTIVVVQGDEPLIDPQLVRDVAAHPSCAIATAAHPIHEAHEV-KVVLDAHGVALPIPWSRDAYLPHWPNVA-HIGLYAYRARFLRTYPTLAQAPIEAAE--LEQL---AMWHGERIAVRVT-EHAPEAGIDTPADLERVQALFRSR....................................................................................................................................................................................................................... 276
57 -17.000IDP91094 gene: kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase [Actinobacillus pleuropneumoniae serovar 5b str. L20] APL_0085 [Actinobacillus pleuropneumoniae serovar 5b str. L20]  ali follow..  20  2....NFTVIIPARYASSRLPR---KPLLDIAGKPMIQHVWEKAQQAGATRVIIATDHPEEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVVQGDEPLIPPVIVSQVAERCQVNMATLAVKLTTKEEL-KALADKNGMALPIPFARDHFADCDDAFVAHIGIYAYRAGFVKQYVAWQPTQLEQLE--LEQL---ALWYGEKIHIELAKQA-PQVGVDTQEDLERVRRIL.......................................................................................................................................................................................................................... 249
58 -16.900IDP00054 acetyltransferase, CYSE/LACA/LPXA/NODL family BA_3600 [Bacillus anthracis str. Ames]  ali follow..  19  4.........................................................................................................................................................................................................................................................................................................................LNQKPEYSKYDIGDYTYSKVGPTIETKLKIGKFCSLGEEVVFLLGGEHRADWITTYPFNALFGEGAHI---TGHPSSKGDIVVGNDVWIGYQSCISSGVTIGNGAIIGARSVITKDVPPYAIVAGNPAKFVRYRFPQETIDK. 147
59 -16.900IDP00066 gene: kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase [Campylobacter jejuni subsp. jejuni NCTC 11168] NTL01CJ00766 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  2.......IIIPARLKSSRFHE---KILCDIGGVPMFVATARRVSSVD-----VCIALDDEKVLSIAKENAVLTSKDHESGTDRINEACKKLALKDDEIIIVQADEPFIECENLLKFKEFASFCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYERENYEESFHLGIYAYSVKALREFCS------SSSALERAEKLEQLRAIENGKKIKMLEISTTSMGIDTKEDYERALKIYLEK....................................................................................................................................................................................................................... 239
60 -16.800IDP92709 gene: satA; streptogramin A acetyltransferase [Enterococcus faecium] AAA24783 [Enterococcus faecium]  ali follow..  19  22..........................................................................................................................................................................................................................................................................................................................PILEKLENVEVGEYSYYDSKNGENDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQ. 175
61 -16.800IDP01368 transferase, hexapeptide repeat family VC0238 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  17  22.........................................................................................................................................................................................................................................................................................................NKIQIGKNTRIRYCDIYVNGN-NNQLIIHNGANLKGVSIENCLLEIGE-----NCVIGENCFLSCRESGTKLVIGKECMFSRNVKLMTSDGHDAKSIYIGSHVWLADNVTILKGVDIGSGSIIGINSTVTKSIGQYCIAAGNPARKIKDN......... 179
62 -16.500IDP91095 3-deoxy-manno-octulosonate cytidylyltransferase [Acinetobacter baumannii ATCC 17978] A1S_1557 [Acinetobacter baumannii ATCC 17978]  ali follow..  16  4.......IVIPARFSSSRLPG---KPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDEREICRAEGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVVQGDEPLLPAQLVQQVAKKPNCSMSTLCEPIHALDEF-KVVMSKQNEALTIPYDRDGAKRDEPTLHTHLGLYAYRVSLLQEYVTWEMGKLEKLE---LEQLRVL-ENGHRIAIAVA-EANLPPGVDTQADLDRLNNMPVES....................................................................................................................................................................................................................... 251
63 -16.100IDP01056 gene: yrdA; putative ferripyochelin-binding protein STM3399 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  23  14.........................................................................................................................................................................................................................................................................GIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDV-------------------NYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVML-------------------------HGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHLESGYLYLGSPVKQIRP.......... 152
64 -15.900IDP00898 gene: wcaB; putative colanic acid biosynthesis acetyltransferase WcaB STM2114 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  27  58..........................................................................................................................................................................................................................................................................................................................................................YEIQAATIGRRFTIHHGYAVKHVVAGDDFTIRHGVTIGNRGADSLACPVIGNGVELGANVILLGDITIGNHVTIGAGSVVLDSIPDHALVVGEKARVKVST......... 162
65 -15.900IDP01350 chloramphenicol acetyltransferase VCA0300 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  11......................................................................................................................................................................................................................................................................................................IPLDQQVTNPNIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDV-DKLVIGSFCSISGAVFMMAGNQGHSDWISTFPFFYQDN--DNFADARDGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVVGSNPAKHIKFRFSDVEIAM. 170
66 -15.800IDP01020 gene: wcaF; putative colanic acid biosynthesis acetyltransferase WcaF STM2110 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  51.................................................................................................................................................................................................................................................................................................................................GAKIGKNVVIRPSVKIPWKLTVGDYAWVGDDAV--------LYTLGEINIGAHAVISQKGCTGSHDDINAAPIVIGEKCWLATDVFVAPGVTIGHGTVVGARSSVFKSLPANAICRGNPAVVTRQ.......... 177
67 -15.200IDP02032 gene: mobA; molybdopterin-guanine dinucleotide biosynthesis protein A [Yersinia pestis CO92] YPO0013 [Yersinia pestis CO92]  ali follow..  17  18EMQPNITGVILAGGRSSRM-GGNDKGLIPLNGKPLFQYVIDRFKPQVSD--LVINANRNQGLYKESGIPVIDDIITGFVGPLAGMHAGLSYASTE--VVFAPCDVPALPSDLVSQLWQGKKQALAAYANDDERAHPTFALMH-------------------------------------ISLKTQLADYLIRGDRKLMLFLDSINAQRVKFS----GKADLFSNLNTPADCDLWEQKRRGQ....................................................................................................................................................................................................................... 213
68 -14.800IDP01349 antibiotic acetyltransferase VCA0253 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  26......................................................................................................................................................................................................................................................................................................QLLHEVVKNPNIIIKGKHSYDCWDAGFEASVVRYLHGDEISQR-DQLVIGDYVCIAEVVILMGGNHTHRA--------DWFCLYPFMDVIEQAYVGKGNTEIGDGAWLGMRAMIMPGVKIGEGAIVAANSVVTKDVAPYSIVAGSPAQLVKYRFDAKVIDE. 187
69 -13.700IDP95098 mannose-1-phosphate guanylyltransferase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002920352 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  14  2.....LLPVIMAGGTGSRLRELYPKQFLRLFGNSMLQETITRLSGLEIHEPMVICNEEAEQLRQLNKLSNNIILEPVGRNTAPAIALAALQATRHGDMLVLAADHIINNQPVFHDAIRADEGHLVTFGIVPNAPTGYGYIQRGVA-QVARFVEKPDRERAEAYLAS-NSGMFMFRAKKYLSELAKVNAADNGSDFISIPHDIFCECPDESVDYAVMEKTADAVVVSDVGSWSALWEVSPKDGQGNVLSGDAWVHNSENCYINSDEKLVAAIGVENLVIISTKDAV--------------LVMNRERSQDVKKAVEFLKQNQRSEYKRHREIYRPWGRCDVVVQTPRFNVNRITVKPGGAFSMQMHHHRAEHWVILA-GTGQVTV---NGKQFLLTENQSTFINPGRIPLEVLEIQSGSYLGEDDIIRIK........................... 465
70 -13.600IDP04290 gene: manC; mannose-1-phosphate guanylyltransferase [Yersinia pestis CO92] YPO3099 [Yersinia pestis CO92]  ali follow..  14  1..MLMLLPVIMAGGAGSRLRALYPKQFLALTSLTMLQETLLRLDGLPHLAPLVICNEEAEQLRQKNLVHSGIVLEPVGRNTAPAIALAALRATMSGDLLVLAADHVIQDKLAFIRAVQAEAGKLVTFGIVPKSPTGYGYIRQGKQ-QVAAFVEKPDLITAERYLAS-NSGMFVFKASRYLQELDLIAGQHTDLDFIRLNEEAFSSCPDESIDYAVMEKTSDAVQWNDVGCWSALWEINTKDDHGNVIRGDVLIEDTNNSYVYSQNRLIATVGINDLVIVETKDAI--------------LVAHKDKVQNVKGIVGQLKLESRCEYLQHREVYRPWGSHDAIAEGVRYHVQHVTVKPGQRIATQIHYHRAEHWIVVS-GIAKVHY---GKETYLVNENESTYINPGQIPLEIIEVHTGNYISEDDVERID........................... 464
71 -13.500IDP04551 gene: maa; maltose transacetylase [Clostridium perfringens ATCC 13124] CPF_2912 [Clostridium perfringens ATCC 13124]  ali follow..  18  65............................................................................................................................................................................................................................................................................................................STGESIYMEPNFKCD---YGYNISVGNNFYANFDCVMLDVCKI---------------------TIGECFFAPGVHIYTATHPIDPIERLNKPVTIGNNVWIGGHATINPGVTIGNNVVVASGAVVTKDVPDNVVVGGNPAKIIKK.......... 191
72 -13.300IDP01515 hexapeptide-repeat containing-acetyltransferase VCA0836 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  25  55............................................................................................................................................................................................................................................................................................................HLGHKSCVQPPFHCE---FGKTIRIGDHTFINMNVVMLDGAPI---------------------TIGDVLIGPSTQFYTASHSLDYRRRQAKPIVIEDDVWIGGNVVINQGVTIGARSVVAANSVVNQDVPPDTLVGGTPARILRS.......... 182
73 -13.300IDP01775 gene: ptmB; acylneuraminate cytidylyltransferase (flagellin modification) [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1331 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  1..MAEILCTICARGGSKGVKN---KNIRKINKLEMIAYSIIQAQNSKLFKHIVISTDSDESVAQKYGAEVFFKLANDRTAKLPVMRDALLRSEEHETLIDLDASAPLRSSLDIKKAYEVENDNSNLITAVPARRNPYFNLVEIQNNKVVKSKEGNFTTRQSAKCYDMNASIYIFKRDYLLE----------NDSVFGKNTGLFVMDE------------STAFDIDSELDFKIVEFLISLKNLSP................................................................................................................................................................................................................... 232
74 -13.300IDP02453 gene: maA; maltose O-acetyltransferase [Bacillus anthracis str. `Ames Ancestor`] GBAA3402 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  21  74.............................................................................................................................................................................................................................................................................................................................................................YNIHVGKSFFANFNCVILDVRIGDHCMFAPGVYTATHPLHPVERVKIGNNVWVGGGAIINPGVSIGDNAVIASGAVVTKDVPNNVVVGGNPAKVIKT.......... 184
75 -13.300IDP00326 gene: ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein Cj1607 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  15  1..MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVT--SNITYMKKFTKNYEFIEGGDTR--AESLKKALELIDSE--VMVSDVARVLVSKNLFDRLIENLDKADCITPAL----------------KVADTTLFDNEALQREKIKLIQT--QISKTKLLKKALDQ--------NLEFTDDSTAIAAMGGKIWFV--EGEENARKLTFKEDLKKLDLPTPSFEIRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGE---ANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQ-------AMQSNIAHTLDLDEFRI--NVKATTTEKLG---IGRKEGMAVLSSV......................................................................... 361

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24