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Query: gi|15675973|ref|NP_273099.1|(removed signalp:1-19) putative membrane-bound lytic murein transglycosylase A (NMB0033) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRPLast
1 -6.940sp|P00568|KAD1_HUMAN Adenylate kinase isoenzyme 1 OS=Homo sapiens GN=AK1 PE=1 SV=3  ali follow..  14  5......................................................................................................................................................................................................................................LKKTKIIFVVGGPGSGKTHLSTGDLLRSEV--SSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLID----------------------GYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLK---VDDNEETIK--KRLETY----KATEPVIAFYEKRGIVRKV........... 173
2 -6.190sp|Q92673|SORL_HUMAN(removed signalp:1-28) Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2  ali   11  135.................................................................................................................................................................................................................YAVRKSIYRYDLASGATEQLPLTGLRAAVALDFD-HNCLYWSDLALDVIQRLCLNGSTGQEV---IINSGLETVEALAFEPLSQWVDAGFKKIEVAPDGDFRLTIVNSSV--------------LDRPRALVLVPQ----GVMFWTD------GDLKPGIYRSNMDGSAAYHLVSEDVKWPNG.............................. 297
3 -6.160sp|Q3T906|GNPTA_HUMAN(removed signalp:1-34) N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Homo sapiens GN=GNPTAB PE=1 SV=1  ali   10  95......................................................................................................................................................................................................................................ELNKQTKKNMTIDGKELTISPAYLLWDLSAISQSKQDEDISASRFEDNEELRYSLRSIERHAPWVRN---------------IFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLND-----------DVMFGK............................... 229
4 -6.070sp|Q9Y6K8|KAD5_HUMAN Adenylate kinase isoenzyme 5 OS=Homo sapiens GN=AK5 PE=1 SV=2  ali follow..  14  2..........................................................................................NTNDAKEYLARREIPQLF------ESLLNGL------------------MCSKPEDPVEYLESCLQKVKELGGCDKVKWDTFVSQEKKTLPGGQSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELI--PRPKIILVIGGPGSGKQYISVGELLRKKIHSTSSNRKWSLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVID-----------------------GFPRDVAQALSFEDQICTPDLVVFLACA---NQRLKERLL-PDDNVKATQ--RRLMNF----QNAAPLVKYFQEKGLIMTF........... 298
5 -5.980sp|Q5TCS8|AKD1_HUMAN Adenylate kinase domain-containing protein 1 OS=Homo sapiens GN=AKD1 PE=1 SV=2  ali   10  61.........................................................................................................................................................................................................................................PIRIIIVGPPKSGKKHLSIGGALRYVLNNHPETELALMLNWHLHKGMTAPDELAIQALELSLMESVCN-------TAGVVI----------------GYPVTKHQMNLLEARSIIPMVIFELSVP---SKEIFKRLL-LHNSAQIVA--VNNVKY----KNIGEIRQYYQEQHQNWYVI.......... 233
6 -5.970sp|Q14114|LRP8_HUMAN(removed signalp:1-32) Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens GN=LRP8 PE=1 SV=4  ali   10  73............................................................................................................................................................................................YEMDLLTKNCKAAAGKSPSLIFTNRHEVRRIDLVKRNYSRL-IPMLKNVVALDVE-TNRIYWCDLSYRKIYSAYMDKASDPKEQEVLIDEQLHSPEGLAVDWVHKWTDSGNKTISVAVDGGRRRTLFSR---------------NLSEPRAIAVDPL----GFMYWSDIEKSGLNGVDRQTLVSDNNGITLDLLSQ-RLYW---DSKLHQLSSIDFSGGNRKTLISSTDFLSHP 299
7 -5.640sp|Q9ULG1|INO80_HUMAN Putative DNA helicase INO80 complex homolog 1 OS=Homo sapiens GN=INO80 PE=1 SV=2  ali   16  197.................................................................................................................................................................................................................................................ITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMILLEEYMVYRKHTYMRLDGSSKISERRVADFQNRNDIFVFLLSTRA-------GGLGINLTAADTVIFDSDWNP.......................................................................... 300
8 -5.500sp|Q96N76|HUTU_HUMAN Urocanate hydratase OS=Homo sapiens GN=UROC1 PE=1 SV=1  ali   12  3...........................................................................................................................................................................................................................CTSGDPQDLAVTDELATSVLEEIREAARHRLVVGSQARILYSDQKGRVAIAVANQAIACRRIKAP-LSRDHHDVSGTDSPFRETSNIYDGSAFCADMAVQNFVGDACRGATWVALHNGGGVGWGEVING-GFGLVLDGTPEAEGR---RLMLSWDVSNGVARRCWS----GNQKAYEIICQTMQENSTLVVTLPHKVEDER.. 218
9 -5.360sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3  ali follow..  12  2........................................................................................................................................................................................................................................KPLVVFVLGGPGAGKTHLSAGELLRDERK-NPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQ----KNKFLI----------------GFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCL-SDDNRESLE--KRIQTY----QSTKPIIDLYEEMGKVKKI........... 175
10 -5.300sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3  ali   13  141....................................................................................................................................................................................................................HKTANMDVLIVLATTIAFAYSLIILLVAMYERAKITFFDTPPMLFV---------FIALGRWL----EHIAKGKTSEALAKLISLQATEAT-IVTLDSDNILLSEEQVDVELVQRGDI-IKVVPGGKFPVD--------------------------------GRVIEGHSMVDESLITGEASTVIAGSINQNGSL.............. 300
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.