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Query: gi|15675978|ref|NP_273104.1| UDP-N-acetylglucosamine pyrophosphorylase (NMB0038) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMVGRVIDTAAALNPQNICVVIGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLSAEGRTLVLYGDVPLIDVETLETLLEAAGNEVGLLTDVPNDPTGLGRIIRDSNGSVTAIVEEKDADAVQKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRASHLAAGVNNKLQLTELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVNCIFEGDIELGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGCKTNFGAGTIIANYDGVHKHKTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVRPEKDKQLast
1 -3.650HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  22  1....................................................................................................................................................................................................................................................................................................................................................LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRV-SGNNL---FCITGYSGLDP-ELDISNVQAPGVEYRDTYPTT........................................... 70
2 -2.670PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8]  ali follow..  6.............................................................................................................................VTPGFYDKSYVGKWMFQVMGLEYDKALKLAEELPEQFFPETATWGLCWHEIKW-QAIYEKRDYHSPMTPYIMERYLENAT--GFTVHIADCHDAGPLKYKPPHPNVFKAFFNGDGTLDSKKVRKLIDKLKESHTTYFVNDYSMFEIVFSEKFMVS-NIGLLFKIPFWKARRFDGSELWDGSHLMDAAIEYEMRLGVKYKEGEFRLDIERMTARAKVPLSEKMHIEKQTVSAKAFNWQSLFFGSVPMDGNLLMNYCRADNKTTANIKIPVASISESYGNATCTVKRNLAYFDGSLKMNGSRLLNS........................... 324
3 -2.430PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371  ali follow..  10  5.....FSFLLYSCDEKPKSGITNPSFLPNASGEN--------------NEMLIVMDSTGRELVDIYSSYISGLPQPEPR------------------------DLRYIKPRKFNSILKHAKNIVVAFSL-------------EGNSLDSEILRRNFNSESLDKIQSDSSLFYFVRRNQY-----------ARGQV----VLYLFSENDDDLYSKIKRNRNSILKFFDDELKKRVDTEIFRKVENNLMDKNIKIKIPYGYDLAKSINEENSNFF....................................................................................................................................................................................... 218
4 -2.330HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  10  17.............................................................................................................................................................................................................................FAACDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVLCRFTEYCLANRAKICDDAITLTNDVPAWAAMTDEISVKNTSGTFEGYFVDIKKSLLANTYNSSYYGIPFTWIKVGRLITADDELAHV----RLLVPHTYGTTSASASVYACLYDI.......................... 232
5 -2.050PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;  ali follow..  13  19.............................................................................................................................ICYSSIMGPINFEKAKKEREQAVIA--RLIDIRKAQQEYRSLHHGMYTEHFDTLIDFVK-------------NQKLPFVMKVG------QLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKKNGLENFKRDTMWVAV-----MDTIYPKGFNADSMKYIGAIFEMNVKNDTAKSGA--EVKAPYETYLGGL---DRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGA....................................................................................................... 224
6 -1.820PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  20  3.......................................................................................................................................................................................................................................................................................................................................FLLPLEAMEYEINKGAGNPLEFK------GLKSQYLFIFAGGLVAV................................................................................... 42
7 -1.760PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  4............................................IKGEPGKGIVLKEYGKNIQKIVDWILTIEDREQRTRYANTCVELMRQLNPGDHLFIMSNDTPYPMPDIAVLGRKPERVPYNHNKLKYKH---YGKNINL----IEQAILKEDGAEKEDAIIYL--------GRLMKRLYSTWNKENVDDEVIVEHLSELSKNN......................................................................................................................................................................................................................................................... 169
8 -1.710PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  13  60.....................................................IMGSTCFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSR---------VVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLHTIRETDLFEIF----SSQVENKNVIDSLMGKYLDGNGNPLSVRKTKSVVPVSDG...................................................................................................................................................................................................................................... 219
9 -1.490PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  9...........................................................STIESAIQKAAGKYVCGCDQTAVTDIHLQPDQ--TSGQLTIYNDDDEELANVMIEEWATYDGDDKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDTLLVDDELLKGLDKEL-------DEFLKNLLE.............................................................................................................................................................................................................................................................. 147
10 -1.410PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  15  26........................................................................................................................................................................................................................................................................................................LKDILNSSAVKNAVTSVTGGKAVTFENLQGTWMYVNPALQLEGDNALKNVAGSLAATEAEKKMKEYCAKVG---------IVEGVFNYVFNSDSTFTSALKRGSLKGT.................................................... 124

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24