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Query: gi|15675956|ref|NP_273074.1| putative cell division protein FtsX (NMB0008) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSIIHYLSLHVESARTALKQLLRQPFGTLLTLMMLAVAMTLPLFMHLGIQSGQSVLGKLNESPQITIYMETSAAQSDSDTVRSLLARDKRLDNIRFIGKEDGLEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDTEWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPASFIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYAGELGLVFGFVIALGVFGAWLATTQHLLGFKAKKLast
1 -5.400sp|Q96PP4|TSG13_HUMAN Testis-specific gene 13 protein OS=Homo sapiens GN=TSGA13 PE=1 SV=1  ali   10  2..................................................NSKEISDAVGQSKFVLENLRHYTVHPNLAQYYKPLKATALQKFLAQNRKNTSFMLKVTQYDQDKTLLITNNPPPCS................................................................................................................................................................................... 78
2 -4.870sp|A6NE01|F186A_HUMAN Protein FAM186A OS=Homo sapiens GN=FAM186A PE=2 SV=3  ali   16.......KKNLILLNQAIKTCGLPSQLHTMARTLIIEILHMDTV-YIAYRLIQHARNNIMKRLKAIQNTGKGYEARNLHMMLSRLDDYGKKVMQVWTEKQKSLGQKRNQCLKKMIHVFNQQPIP..................................................................................................................................................................................... 149
3 -4.830sp|Q8N402|YV020_HUMAN Putative uncharacterized protein LOC388882 OS=Homo sapiens PE=2 SV=1  ali   19....................................................................VYDICNEDAVDISDEDTVDISNEASVHDISNEAAVCDISNDAVNISNEAAVRDISNDAVDICNEAAVHDISNEDTIEDISYEDTVYDITNEDA................................................................................................................................................ 111
4 -4.760sp|Q86V42|F124A_HUMAN Protein FAM124A OS=Homo sapiens GN=FAM124A PE=2 SV=1  ali   9.............................................................ALAVVLFLQEEYGEEQILQLHRTLQQPP-----RHHHTEQVHGRFLPYCSQDFFTLAPGTPLWAIRPVHYGKEIVRFTVYCRYDNYADSLRFYQLILRRSPSQKKADFCIFPIFSNLDVDIQFSLKRLQCPVPTDSSVLEFRVRDIGELV-ISEGRWQTEDH.................................................................................. 179
5 -4.760sp|Q6Q759|SPG17_HUMAN Sperm-associated antigen 17 OS=Homo sapiens GN=SPAG17 PE=1 SV=1  ali   1..............................................FFVMYADGSGMELLRDSDIEEYLSLAYKESNTVVLQEPVQEQPGTLTITVLRPFHEASPWQVKKEDTIV.............................................................................................................................................................................................. 69
6 -4.730sp|Q8IV33|K0825_HUMAN Uncharacterized protein KIAA0825 OS=Homo sapiens GN=KIAA0825 PE=2 SV=2  ali   9...........................................................HNSFDLHCLLNSFPGDLEFEQIFSDIDEKIEQNAASI---KHCIKEIQSEINKDCFEWLTNYNYSTSESSFISHGDLIKFFKTLQDLLKNEQNQEEMT--------LDLLWDLSCHSSVSFPSTLSGTS-FHFLSRTSLHSVEDNSSMDVKSMWDDIRLHLRRFLV................................................................................ 173
7 -4.700tr|Q5T5A0|Q5T5A0_HUMAN Chromosome 9 open reading frame 24 OS=Homo sapiens GN=C9orf24 PE=2 SV=1  ali   1................................................................................METAVRGMP----LECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFHGYESACSG-YYASGAPCTDRRLRPWCREQPTVRCVPPYEHRPGMQCAVTTPPPSYYPYPRWDTSHFKKSGGPNNYVIHPFVSETY............................................................................ 158
8 -4.660sp|Q8TB52|FBX30_HUMAN F-box only protein 30 OS=Homo sapiens GN=FBXO30 PE=1 SV=3  ali   72.....................................................................AVDTSDLEVAEDPMGLQGIDLITAALLFCLGDSPGGYHIDVGTQTFSLPSAILATSTMVGEIASASACDHANPQLSNPSPFQTL-GLDLVLECVARYQPKQRSM---------------TFVCGQLFRRKEFSSHFKNVHGDIHAGLNGWMRCPLAYYG............................................................................. 228
9 -4.590sp|Q8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 OS=Homo sapiens GN=POMGNT1 PE=1 SV=2  ali   14  1.........................................................SWGDPVLLKTDVPLSSAEEAE---CHWADTELNRRRRRFCSKVEGYGSV--SCKDPTPIEFSPDPLP..................................................................................................................................................................................... 63
10 -4.440sp|P42695|CNDD3_HUMAN Condensin-2 complex subunit D3 OS=Homo sapiens GN=NCAPD3 PE=1 SV=2  ali   11  1.......................................................................................MVALRGLGSGLQPWCPLDLRLEWVDTVWEFTETEPLDPSIEAEIIE-TGLAAFTKLYESLLPFATGEHGSMESIWTFFIENNVSHSTLVALFYHFVQIVHKKNVSVQYREYGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQTL........................................................................ 147

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.