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current user: public |
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Query: gi|15675957|ref|NP_273075.1| BolA/YrbA family protein (NMB0009) [Neisseria meningitidis MC58], from N.meningitidis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 | |||||||
# | Score | Template | Links and tools | %id | First | MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARLARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ | Last |
1 | -5.760 | sp|O75717|WDHD1_HUMAN WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens GN=WDHD1 PE=1 SV=1 | ali | 13 | 15 | ......IRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIID.. | 88 |
2 | -4.800 | sp|Q04726|TLE3_HUMAN Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2 | ali | 15 | 9 | ...............................ISITSSYAAPFAMMSHHEMNGSLTSPGAYAGLHNIPPQMSAAAA....... | 52 |
3 | -4.690 | sp|Q96M29|TEKT5_HUMAN Tektin-5 OS=Homo sapiens GN=TEKT5 PE=2 SV=1 | ali | 12 | 53 | .........................SLFYKIANVQTCPDESTSTLRPPTILPTLRS----------ALFSRYSPHD...... | 93 |
4 | -4.680 | sp|Q7Z2T5|TRM1L_HUMAN TRMT1-like protein OS=Homo sapiens GN=TRMT1L PE=1 SV=2 | ali | 10 | 19 | .......SHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSK-----MGAHYHCIICSATITRRT...... | 82 |
5 | -4.600 | sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2 | ali | 19 | 70 | ...........................................LENRQTI---INDYITSQQMHHNA............... | 90 |
6 | -4.440 | sp|Q13098|CSN1_HUMAN COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1 SV=4 | ali | 12 | 5 | ........................ENPSLDLEQYAASYSGLMRIERLQFI----ADHCPTLRVEALKMALSFVQR....... | 51 |
7 | -4.430 | sp|O75376|NCOR1_HUMAN Nuclear receptor corepressor 1 OS=Homo sapiens GN=NCOR1 PE=1 SV=2 | ali | 20 | 61 | .........................................AMENTRQTI---LNDYITSQQMQ.................. | 80 |
8 | -4.420 | sp|Q6PJT7|ZC3HE_HUMAN Zinc finger CCCH domain-containing protein 14 OS=Homo sapiens GN=ZC3H14 PE=1 SV=1 | ali | 22 | 24 | .....................................FEGMKPVNQTAASNKGLRGLLHPQQLHLLSRQLEDPNGSFSNAE. | 67 |
9 | -4.400 | sp|Q8NG31|CASC5_HUMAN Protein CASC5 OS=Homo sapiens GN=CASC5 PE=1 SV=3 | ali | 20 | 6 | ..........................CHDKMIICSEEEQNMDLTKSHTVV................................ | 29 |
10 | -4.340 | sp|Q86UW6|N4BP2_HUMAN NEDD4-binding protein 2 OS=Homo sapiens GN=N4BP2 PE=1 SV=2 | ali | 15 | 1 | .................................................MWNPMIPAFLFQGNHGFVAPVVTTAAHWRSVN. | 33 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |