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Query: gi|15675961|ref|NP_273079.1| hypothetical protein (NMB0013) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSREARREVEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSVLAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISWLast
1 -5.890sp|Q53T94|TAF1B_HUMAN TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Homo sapiens GN=TAF1B PE=1 SV=1  ali   3............TLAFCYLSLLWQREAITLS-AFQHFPEQMKLYGRDRGIFGIESWPDYEDIYKKTVEVGTFLDLPRFPDITEDCYLHPNILCMKYLMEVNLVVKMTGMGEVDFLTFDPIAKMAKTVKYDVQAVAIIVVVLKLLFLLD. 162
2 -5.870sp|P04035|HMDH_HUMAN 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Homo sapiens GN=HMGCR PE=1 SV=1  ali   29  44.................................................................................................................................VITLSLALLLAVKYIFF... 60
3 -5.110sp|P01266|THYG_HUMAN Thyroglobulin OS=Homo sapiens GN=TG PE=1 SV=5  ali   18  13.......................................QFIRETEEIVSASNSSRFPLGESFLVAKGIRLRNEDLGLPPLFPPREAFAEQFLRGSDYAIRLAAQSTLSFY...................................... 84
4 -4.760sp|Q8NCG7|DGLB_HUMAN Sn1-specific diacylglycerol lipase beta OS=Homo sapiens GN=DAGLB PE=1 SV=2  ali   24  1..LYPPGRIIHLYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAAC.............................................................................................. 69
5 -4.760tr|B4DQU0|B4DQU0_HUMAN Uncharacterized protein OS=Homo sapiens GN=DAGLB PE=2 SV=1  ali   24  1..LYPPGRIIHLYSAKWSHEAEFSKILIGPKMLTDHMPDILMRALDSVVSDRAAC.............................................................................................. 69
6 -4.720sp|Q92508|PIEZ1_HUMAN Piezo-type mechanosensitive ion channel component 1 OS=Homo sapiens GN=PIEZO1 PE=1 SV=4  ali   10  12.................................................................................................................................LSTVWTCVIIVCKMLYQLKV 31
7 -4.550sp|Q4VNC0|AT135_HUMAN Probable cation-transporting ATPase 13A5 OS=Homo sapiens GN=ATP13A5 PE=2 SV=1  ali   17  51.TLWPITTINYITVAFIF................................................................................................................................... 67
8 -4.440sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens GN=ITPR1 PE=1 SV=2  ali   11  35.....FHESILLAIALLEGGNTTIQHSFFCRLTEDKKSEKFFKVFYDRMKVAQQEI............................................................................................. 85
9 -4.420sp|Q8IYP9|ZDH23_HUMAN Probable palmitoyltransferase ZDHHC23 OS=Homo sapiens GN=ZDHHC23 PE=2 SV=3  ali   14..........HVATCLC--DCQDLDEGCDRWITCKSLQPETCERIMDTISDRLR............................................................................................... 55
10 -4.280tr|Q5JRT7|Q5JRT7_HUMAN Translocase of outer mitochondrial membrane 5 homolog (Yeast) OS=Homo sapiens GN=TOMM5 PE=2 SV=1  ali   1.........................MFRIEGLAPKLDPEEMKRKMREDVISSIRNFLIYVALLRVSECLPGCDCETSGELTDGHPLTLRGHRGLRTELNAPFILKKLDSI....................................... 85

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.