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Query: gi|15675979|ref|NP_273105.1|(removed signalp:1-21) hypothetical protein (NMB0039) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .
# Score Template Links and tools%idFirst TYQDGNGKTAVRQKYPAGTPVYYQDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNRLast
1 -5.880sp|Q9BXQ6|CECR6_HUMAN Cat eye syndrome critical region protein 6 OS=Homo sapiens GN=CECR6 PE=2 SV=1  ali   25  10......GTTGFRLTMALSVPLLYEAGAPPGSAGPLLLQPQRH........................... 52
2 -5.840sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2  ali   34  33VIQLEDGTTAYIHSFEDGQPVQLEDGSMA........................................ 70
3 -5.810sp|Q9BSD3|RHINO_HUMAN RAD9, RAD1, HUS1-interacting nuclear orphan protein OS=Homo sapiens GN=RHINO PE=1 SV=1  ali   13  24.............................EGPKHSCASTQLPITHTRQPSKPIDHSTITSWVSPDF... 61
4 -5.790sp|Q5VW22|AGAP6_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 6 OS=Homo sapiens GN=AGAP6 PE=2 SV=1  ali   11  5..........FSQQYSLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRTLSIPDEQ...... 57
5 -5.380sp|Q9UK96|FBX10_HUMAN F-box only protein 10 OS=Homo sapiens GN=FBXO10 PE=2 SV=3  ali   12  7...............SLYDRIVLFPGVYEEQGEIILKVPV............................. 31
6 -5.230sp|Q8N1W1|RGNEF_HUMAN Rho-guanine nucleotide exchange factor OS=Homo sapiens GN=RGNEF PE=1 SV=3  ali   14  32.......QMSFNTFNKLNPSVIHQDATYPTTQSHSDLRTSEHQVDLKVDPSQPSNVSHKLWT....... 87
7 -5.120sp|Q9Y238|DLEC1_HUMAN Deleted in lung and esophageal cancer protein 1 OS=Homo sapiens GN=DLEC1 PE=2 SV=2  ali   15  22.......................TDLTAQHFIRFEPENLRSTARKQLIIRNATHVELAFYWQ....... 60
8 -5.040sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1  ali   21  41........TNVRSSFPVSLPLAYPHPHFA--LAAQTMQQIRHPRLPMAQFGGTFSPSPNTW........ 92
9 -4.890sp|A8MT82|CTLFB_HUMAN Putative centaurin-gamma-like family member 11P OS=Homo sapiens GN=CTGLF11P PE=5 SV=2  ali   13  1............QQYSSCSTIFLDDSTASQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQ...... 51
10 -4.860sp|Q96P64|AGAP4_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4 OS=Homo sapiens GN=AGAP4 PE=2 SV=2  ali   11  1............QQYSLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRSLSIPDEQ...... 51
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.