FFAS03 results for 77358703

Query: gi|77358703|ref|YP_338288.1| pilS cassette (NMB0023) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 .`
#	Score	Template	Links and tools	%id	First	`MAEGQKSAVTEYYLNHGEWPGNNTSAGVASSSTIKGKYVKEVTVANGVITATMLSSGVNKEIQGKKLSLWAKRQDGSVKWFCGQPVTRTDAKADTVAAAAKTADNINTKHLPSTCRDASSVVCIETPPTAFYKNT`	Last
1	-8.180	`sp\|Q86X10\|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1`	`ali`	17	2	`..DAAEATLTCIMQLLGAFPSPSGPASPCSLPTINKHSFRYFVLDNSVILAMLEQPLGNEQNDFFSVTVLVRGMSGRLAWAQQ....................................................`	95
2	-6.240	`sp\|A5PLK6\|RGSL_HUMAN Regulator of G-protein signaling protein-like OS=Homo sapiens GN=RGSL1 PE=2 SV=1`	`ali`	11	14	`................................................................LMLRATHLQEGSRVVTLCNMNIKSLLNLSIWHPNQSTTRREILSHWLPNHTKMTMAKEEACHGLMQEYET.`	98
3	-6.060	`sp\|Q2PPJ7\|RGPA2_HUMAN Ral GTPase-activating protein subunit alpha-2 OS=Homo sapiens GN=RALGAPA2 PE=1 SV=2`	`ali`	7	3	`...TARMVMAHLVNHLGHYPLSGGPAILHSFEVFRSPNLQLFVFNDSTLISYLQTPTEGPVGGSPVVRVIVRDISGKYSWDGK....................................................`	104
4	-5.880	`sp\|Q6GYQ0\|RGPA1_HUMAN Ral GTPase-activating protein subunit alpha-1 OS=Homo sapiens GN=RALGAPA1 PE=1 SV=1`	`ali`	9	2	`..IAARTVITHLVNHLGHYPMSGGPAMLTSPELFESPNIQFFVLNNTTLVSCI-GLSAGLASANSNVRIIVRDLSGKYSWDSA....................................................`	109
5	-5.600	`sp\|Q9H2P0\|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1`	`ali`	22	30	`.................................................................................................................YCKEHIEDFKQFEPNDFYLKNT`	51
6	-5.520	`tr\|E5RIT0\|E5RIT0_HUMAN Uncharacterized protein OS=Homo sapiens GN=TM2D2 PE=4 SV=1`	`ali`	18	3	`................................................................................KCLLPVLITCMQTAICKDRMMMIMILLVNYRPDECEDPVDHVGNATASQE.....`	55
7	-5.290	`sp\|Q9BZC7\|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3`	`ali`	10	39	`FFVCVAMTVALSVPEIGDLPPLVLSPSQYHNYTQPRGNFIPYANEERREYRLRLSPDASPQQLVSTFRLPSGVGA-----TCVLKSPANGSLGPTLNLSSGESRLLAARFFDSMCLESFT...............`	153
8	-5.200	`sp\|P17813\|EGLN_HUMAN Endoglin OS=Homo sapiens GN=ENG PE=1 SV=2`	`ali`	12	181	`..........................GCHLEGVAGHKEAHILRVLPGHTVTVKVELSCAPGDLDAVLILQ---GPPYVSWLIDANHNMQIWTTGEYSFKIFPEKNIRGFKLPDTPQG-GEARMLNASIVASFVEL`	292
9	-5.080	`sp\|O60393\|NOBOX_HUMAN Homeobox protein NOBOX OS=Homo sapiens GN=NOBOX PE=1 SV=4`	`ali`	15	37	`..............................................................SGQILMQPPAGNIGTASWSCLPELPFPGPFCPQALGHPPGGDGYFPDLFPTPC....................`	91
10	-4.770	`sp\|Q8NBW4\|S38A9_HUMAN Putative sodium-coupled neutral amino acid transporter 9 OS=Homo sapiens GN=SLC38A9 PE=1 SV=2`	`ali`	16	63	`.........................................................................................................APDHVVPAP----GSAYKLQSYTEGYGKNT`	97

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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