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Query: gi|15675953|ref|NP_273071.1| arsenate reductase (NMB0005) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSELKDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANGKAAVGRPLENIEAVLLast
1 -55.500PF03960.15; Q9JZ90_NEIMB/5-114; ArsC family  ali follow..  15  1......HGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICSWLEQVP---LATLLNKRGTSWRKLDAETQLSSTAEAVKLMSEMPSLIKRPVLECGGKVYAGFSEETYDGI. 110
2 -41.100PF07955.11; S0E7W5_GIBF5/2-126; Protein of unknown function (DUF1687 topsan)  ali follow..  20  7LDIVTVFHKASSPASVRVANLLKQVSANATSGATLDQASDHSAQTAPIRDQFELNITEDPPTDDQVKTILEYVGGANNEKEALRKFKESKESFIRPVVVDNGKAIAG.......... 124
3 -12.600PF00462.24; Q7MC26_VIBVY/4-63; Glutaredoxin  ali follow..  16  1...IEIYTKSYCPHCKAAKQTLASMGLVYREIEVSDDQALFNEMLNRSQRRTVPQI............................................................. 53
4 -9.750PF13098.6; D9SD62_GALCS/101-221; Thioredoxin-like domain  ali follow..  15  7.RKLAYFTDPQCGYCKKLEKELSKSDVTLYMFLYPIFPGSEEIVRNVRCA----------KDPAKTWDDLMLKGIAAASIACKTPTDKVMAFGREPLIFADGTQVPGYPAEELEKHL 121
5 -8.270PF16317.5; D6D1V7_9BACE/37-377; Glycosyl hydrolase family 99  ali follow..  8  57.PQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWQDETEAKRIGLILDAADKKKIKVCFHLEPYPSRNVQNLRENI--VKLITRYGNHPAFYRKPLFF.................. 157
6 -7.160PF18717.1; A0A060SSA2_PYCCI/336-473; CxC4 like cysteine cluster associated with KDZ transposases  ali follow..  7  37IVCATLYGFSPCPTCQHHRRCIGPDLGSTGVFNWNNRILTHELLNAYTNTFSETPFSAFCLTVRRQYEDQDPKMKFCSDETFVRAWFA............................. 137
7 -7.040PF05768.14; Q82SJ4_NITEU/9-85; Glutaredoxin-like domain (DUF836 topsan)  ali follow..  12  1..KLVVYGREGCHLCEEMIASLRKSWFELEVINIDGNEHLTRLYNDRVPVL.................................................................. 53
8 -6.920PF13417.6; A9SEB4_PHYPA/40-119; Glutathione S-transferase, N-terminal domain  ali follow..  4  1.....LVGDVTCPYTQRVRIALLHKNIPVNASLVMPDDLRSYRAENLSATSPDGKYPVFQHGDQKFTGSVDAMLAYIEE...................................... 74
9 -6.610PF01249.18; F2UBF1_SALR5/1-81; Ribosomal protein S21e  ali follow..  16  9...VDLYIPRKCSATNNLIGASDHASIQVDIAKVDKST------------------GIMMPDAVHSYVFCGEVRAQGETDDSLNRLATQDGILK....................... 81
10 -6.210PF06953.11; G4T2A1_META2/1-119; Arsenical resistance operon trans-acting repressor ArsD  ali follow..  20  1MKNIEIFDPALCCSSSADADWLKQQGGNIVRYNLSQQPMAFVDNKVVNGFLERSGEQGL------------------------------------PLVLVDGEIALAGRYPCREEL. 94
FFAS is supported by the NIH grant R01-GM087218-01
1 4 4 8 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.