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Query: gi|15675980|ref|NP_273106.1| putative hydrolase (NMB0040) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQENPTVWLFDLDNTLHDADAGIFTLINRAMTRYMARRLKLSESAASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMPETQNTLSRLKGRKAVFSNGPSFYVRAVVNALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDVPPECCIMVDDSADNLHQAKALGMKTVRFGAKSHALPFIDASVSDMAQLARYAETLSEHRQNHYNTPYPPKIRKKSHALast
1 -50.800PF13419.6; E0UR30_SULAO/3-179; Haloacid dehalogenase-like hydrolase  ali follow..  17  1.......ILFDLDGTLIDSTEAILESFHNSFAVYDFSSPDDEQ-----IKALIGHPLDVMYRELGMKEDMIWDFVNTYKEHYRKISTQKTILLQNAKEAVESAFASLGIVTTKTGKYSQVLMEHFGLMDKFDVLIGREHVQNP-KPHAEPILRALESFDTNNKEIWMIGDTQLDLISAKNAGINSIGV................................................. 177
2 -21.100PF09419.10; Q2HBE9_CHAGB/96-271; Mitochondrial PGP phosphatase  ali follow..  14  43.QVDIRAVVLDKDDCFAIPDHN--------------------------------------------------------------------EVHEPYKGRFEALGRRLLIVSNTAGKLASAVEASTGV----SVLAHTVKKPGCGDEIMSYFRQHPETGVTGPHQIAIVGDRLTDMMLANMMGSWGVWVK................................................ 172
3 -20.400PF11019.8; A1SRL8_PSYIN/27-278; Protein of unknown function (DUF2608 topsan)  ali follow..  20.GVKNTLIVFDIDNTLLTSNVDLGGDIWYQWQTGKLEIKPTKAQIVPCLFEDAIGLL-----------------------YKLGTMVPTEAQVPSLISQWQLNGHNVIALTARPPNVRPPTLTRRSIN-YMSGIMMTT-----GLHKGDSLKYLLNLTERHFDAIVFVDDSENNITDMSQSAIHYTYIEEQRKKKFGAVLTQQQANTMASQWNDLKLK................... 250
4 -20.000PF13242.6; A0A1C4J1N8_9ACTN/183-255; HAD-hyrolase-like  ali follow..  24  1...............................................................................................................................................GKPNPLMMRTGLNAIGAHSESSAMIGDRMTDVLAGLEAGMETFLVLTGLTAVPDITEVVDSIADL............................. 73
5 -19.500PF06888.12; Q8GRL8_SOLLC/4-232; Putative Phosphatase  ali follow..  12  2......VVVFDFDKTIIDVD------SDNWVVDELGATDLFNQLLPTMPWNSLMDRMMKELHTQGKTIQDI------------EEVLKRVPIHPRIVPAIKALGCDLRVISDANVFFIETILKHLGIRDCFSEINTNPGCNLCPPNMCKGMIVERIQAKEGKKRMIYLGDGIGDFCPSLKLREADFVMPRKDFPAWNL-HEWTNGKELEHILLQW...................... 228
6 -18.700PF12689.7; A7F918_SCLS1/29-196; Acid Phosphatase  ali follow..  12  3....PKLIVFDLDYTLWPFWVDTHVTPPIKANSEHSATTDRWGESFAFY-----------------------------------------NEVPSILAQLKNHGIMVGAASTSAPDLGREMLRLLHVMDVDGKKRKAIELEIYPGSKITHFTKLQKSTGIAYKEMLFFDDEARNRNVES-LGVKMCLVKDGVNKAEINR--IKEWRQM............................. 168
7 -18.200PF08645.11; PNK1_SCHPO/69-220; Polynucleotide kinase 3 phosphatase  ali follow..  16  1.....KFIAFDLDGTLIKTKSGRVFSKDA------------------------------------------------------ADWTWWHPSVVPKLKALYQDNYSLVIFSNQNQMKIRAIFESLDLP----VLYAAILKDKFRKPLTGMWNSFLKDVNIDLSFIKYVGDNSTDLKFAENIGIK..................................................... 144
8 -16.700PF06941.12; A4CM85_ROBBH/16-188; 5` nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)  ali follow..  13  4.......VFVDMDEVLADTYGAHIERFNKRFGATLSR---------------------EQCMGGEVWQQIPEHRETLWQHYFEPGFFRDLRPLPDSREVLEEIVHQVYIASAAMQFPDSLKEKHEWLDEHFPFIHWRNRILCGDK----------HILRGD----VLIDDRSHNLEKFQGRS---ILFTSPHNIHTTGFERADNWQEVRAKL......................... 172
9 -13.800PF05116.13; Q937E7_NOSP7/2-251; Sucrose-6F-phosphate phosphohydrolase  ali follow..  14  1...KPFLFVTDLDDTLVYRTPELNQLLKRHRQEYGTKIVYSTGRSPVLYKELQAQSVGTEIYLNGADTPDSDWSEILSPGWEREVVLSITRKYRELVSEQRAFKVSFFLEQEASANVLPQLEAELQKSKLNVKLIYSSGIDLDIVPH-QAMQFLRQKWKFAAEQTVVCGDSGNDIALFAVGNERGIIVGNARKELLQW....................................... 221
10 -13.600PF05822.12; Q7QE29_ANOGA/51-297; Pyrimidine 5`-nucleotidase (UMPH-1)  ali follow..  11  20........MFNECKSIPQDVILEQRNLYHKYRPIEIDP-HMAHEEKVVYMIEWWAKTGDLLRGFKLPQEDIDEVAKRYKDGLRDGTHD-------MFKELHELNVPCLVFSAGLGNCVSSVLKHANVMYPNVKLVSNFMIHTFNKNETVLDGTEYYDIVHSRDHVIVMGDSLGDAGMASGVPSSSHILKIGPRYMDAFDIVLQTMDIPRAIVDMV...................... 246
11 -13.600PF12710.7; Q2KX30_BORA1/7-195; haloacid dehalogenase-like hydrolase  ali follow..  12  1.......ALFDLDHTLLPLDSDYYLARTGRAGDPDEARRRNDELMDRYNGGELTAEQAAEFMLGLLAAHNPVDLAAWHETFMTEVIRPAM--LPAAIELVSSAGDLCIVVTATNGFVTAPITRAFGIPHLIATDAEYRNGRYTGR-KVLRVKQWLADRQLSLAESYFYSDSSNDI.............................................................. 185
12 -12.800PF08282.12; Q8EN32_OCEIH/8-256; haloacid dehalogenase-like hydrolase  ali follow..  10  1.......IFFDIDGTLLTEDPSSTKDAIIQLKNLGHEVAELEIETYVCYNGQYVVYKGNVVYANPLKASSLDDLTQFALDRDHPMKANVPEDHDYIKESINSLKSVLLFNTVGEEKQYEDAFEDFQFIRWHEKSV---DILPANGSKANGINKLLAYTNYPNERQYAFGDGLNDIEMLTEITNSVAMGNGKPEAKTAASYITKDVDK.............................. 242
13 -12.400PF05152.12; Q91EW7_GVCPM/44-341; Protein of unknown function (DUF705 topsan)  ali follow..  16  119YFEPPHVVVFDMDSTLITDEE------------------------------------------------------------------EVRIRDPAIYAALDELK-VLCLWSYGDREHVVESLNKVGLGNYFKIILSGGR----------RVGEYKLDEEEDRRYNVLYDSTPFYLNMTHVKNIPK----SPRVVLWYLINHNIVFFKSITLVDDLFDNNIY................ 262
14 -12.100PF00702.26; A0A077Z942_TRITR/3-232; haloacid dehalogenase-like hydrolase  ali follow..  1....IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRDEPAILDQAIARIPVKEKYTVLKSAPEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG....................................................... 230
15 -11.900PF03031.18; A0DDQ0_PARTE/225-388; NLI interacting factor-like phosphatase  ali follow..  16  2......TIVFDLDETLVHCNENLAIPSDVIFT----------------------------------------------QVSPQEKIKAGINVRPGAVKLLELLVFELIVFTASHPCYAQKVIEYLD-KTLFSHSLYRDNCIMT---TGGMYTKDLRIFNRSLSQLVLVDNASYSYAWQLDNGIPIIPFYDNKED--------RELELLLKYLKGMQNCKD................. 162
16 -11.900PF13344.6; C5GX93_AJEDR/41-149; Haloacid dehalogenase-like hydrolase  ali follow..  18  1.......FVFDIDGVLLRSS-------------------------------------------------------------------RPLPGAAESLQLLKKEKIPFVLLTNGGGMHETKRIAQ--LSERLHVALDADTIIQSHTPFADLVKGNKVQGALENKCVLIVGGGDGECSVAQEYGFK..................................................... 109
17 -11.300PF03767.14; O23808_PHAVU/28-255; HAD superfamily, subfamily IIIB (Acid phosphatase)  ali follow..  13  71HVHENDVILFNIDGTALSNIPYYSQH---------------------------------------GYGSEKFDSERYDEEFVNKGEAPALPETLKNYNKLVSLGYKIIFLSGRLKDKRAVTLKKAGYNTWEKLILKDPS---NSAENVVEYKTAERAKLVQEGYRIVIGDQWNDL-KGENRAIRSFKLPN............................................... 222
18 -9.520PF05761.14; W5L094_ASTMX/135-576; 5` nucleotidase family  ali follow..  16  10..SEVDIYGFDYDYTLALYSNALDAMIYTTARDFLIEHFKVPDEEVLKLYEGTHHVPLNQVSGFYGKGPNVDVSEAIGMVHIKGYMYKWIMEDLEVLHRLVSHGKKLFLITNSPFSFVDKGMRYMDWRDFFDVVIVQAD-----KPHGQVYKDFLRLTGWRGSKVLYFGDHLYSADLMLRHGWRTGAI................................................. 323

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Li Z, and Godzik A. Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins Pacific Symposium on Biocomputing 11:439-450(2006) [PDF]