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Query: sp|Q8N5Q1|F71E2_HUMAN Protein FAM71E2 OS=Homo sapiens GN=FAM71E2 PE=5 SV=3, from NEW_HUMAN_DOMAINS

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90
# Score Template Links and tools%idFirst MIWLRNRRCLEPLQGTPKWVPVLGELQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDILLIGQPAEDRLast
1 -68.900sp|Q8N5Q1|F71E2_HUMAN Protein FAM71E2 OS=Homo sapiens GN=FAM71E2 PE=5 SV=3  ali  100  1MIWLRNRRCLEPLQGTPKWVPVLGELQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDILLIGQPAEDR 93
2 -60.600sp|Q8IYT1|FA71A_HUMAN Protein FAM71A OS=Homo sapiens GN=FAM71A PE=2 SV=2  ali   33  11........TAQSGSSMSMFNTTMGKLQRQLYKGEYDIFKYAPIFESDFIQITKRGEVIDVHNRVRMVTMGIARTSPILPLPDVMLLAR..... 90
3 -56.000sp|Q6NXP2|F71F2_HUMAN Protein FAM71F2 OS=Homo sapiens GN=FAM71F2 PE=2 SV=3  ali   30  1.....................ENGLLCQLIHSPEFNLFSNSVVFESNFIQVTKPGNWRDVCEGSATVILGVTSSVPSLPLPNVLLMANVTWPQ 81
4 -55.800sp|Q8TC56|FA71B_HUMAN Protein FAM71B OS=Homo sapiens GN=FAM71B PE=1 SV=2  ali   30  11........TAHSYSSMSAFKTSMGDLQRQLNRGEYNIFKYAPMFESNFIQINKKGEVIDVHNRVRMVTVGIVCTSPILPLPDVMVLA...... 90
5 -53.100sp|Q96KD3|F71F1_HUMAN Protein FAM71F1 OS=Homo sapiens GN=FAM71F1 PE=2 SV=1  ali   31  54....................VEEGLLCRVVHSPEFNLFLDSVVFESNFIQVKRGRNWRDVYKASNTMALGVTSSVPCLPLPNILLMASVKWHQ 126
6 -52.500sp|Q8NEG0|FA71C_HUMAN Protein FAM71C OS=Homo sapiens GN=FAM71C PE=2 SV=1  ali   40  1....................TSMGKLQRQLYKGEYTIFRYAPMFESDFIQISKRGEVIDVHNRARMVTMGIVRTSPCLTLPDVMLLA...... 67
7 -50.900sp|Q6IPT2|F71E1_HUMAN Protein FAM71E1 OS=Homo sapiens GN=FAM71E1 PE=2 SV=2  ali   46  2........................RLQRYLQSGEFDQFRDFPIFESNFVQFCPDIQVTRLGEVANEVTMGVAASSPALELPDLLLLAGPAK.. 78
8 -50.100sp|Q8N9W8|FA71D_HUMAN Protein FAM71D OS=Homo sapiens GN=FAM71D PE=2 SV=2  ali   34  1.........................LQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPNVMLLAH..... 63
9 -21.600tr|C9K0C0|C9K0C0_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAM71F2 PE=4 SV=1  ali   27  1MSKIRGLPPEEPGPGVELGVEN-GLLCQLIHSPEFNLFSNSVVFESNFIQVTKPGNWRDVCEGSATVI......................... 78
10 -6.870tr|A8MU08|A8MU08_HUMAN Uncharacterized protein OS=Homo sapiens GN=DOCK1 PE=4 SV=1  ali   20  28..................................YDPVESKFISENYLVRWSSSGLPKDIDRLHNLRAVFTDLGSKDLKREKISFVCQ..... 81

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 2 9 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.