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Query: 3mmr_A mol:protein length:413 Arginase, from PDB1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMASKNVSIIGSPLAAGQPLGGVQLACDDLRKLGLHNVIDVLGWKYEDIGNIDNGDNEMKQEKKTNNYINNNDNNNDNNNDNNNDNNNNCYIPNGVIKEKKHDLSNNKMNGYVNHNFYGNYEENNVISTNDKYKNNCYYDNIRNIKEIGIFSKNLFDTMSNELRKKNFVLNIGGDHGVAFSSILSSLQMYQNLRVIWIDAHGDINIPETSPSGNYHGMTLAHTLGLFKKKVPYFEWSENLTYLKPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISLDIDSVDNVFAPGTGTVAKGGLNYREINLLMKILAETKRVVSMDLVEYNPSLDEVDKKVHGDSLPILDNATKTGKLCLELIARVLGYDIVLast
1 -68.900[E] KOG2965 Arginase  ali follow..  29  7LSRLLQTRVHSILKKSVHSVAVIGAPFSQGQKRKGVEHGPAAIREAGLMKRLSSLGCHLKDFGDLSFT---------------------------------------------------------------------------PVPKDDLYNNLIVNPRSVGLANQELAEVVSRAVSDGYSCVTLGGDHSLAIGTISGHARHCPDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQDKVPQLGFSWIKPCISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLIGKRQRPIHLSFDIDAFDPTLAPATGTPVVGGLTYREGMYIAEEIHNTGLLSALDLVEVNPQLATSEEEAKTTANLAVDVIASSF................ 323
2 -59.300[E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family  ali follow..  20  32.................................................................................TDAEWVITGVPFDASVSGRAGTRFGAEAIRRASVNLAWEHCRFPWD---FDVRERLKIVDCGDLVYSFG---------DNQNFVEELEAHATALLKAGKRCLTFGGDHFITLPLLRAHAKHFGKLAMIHFDAHTDTYENG---SRYDHGTMFYHAP--------------NEGLIDAAHSVQIGIRTEFDRNL------PFTVLSAPQVNEESVAQTVAKIKEVI---GDLPVYLTFDIDCLDPAYAPGTGTPVCGGLSTDRALKILRAL-KDVNIVGMDLVEVSPAYDQSDITALAGATLALEMLYMQGA............... 303
3 -56.700[E] KOG2964 Arginase family protein  ali follow..  16  56.............................................................................SKRSEDFDIAFIGMPFDTGTSYRPGARFGPSSLREGSRRINTKYGAVNVPLEINPFKSWAKLVDCGDIPVTTYDILKA--MDQLESAYFQLHDGFAKNDTVLPRVLSLGGDHTIVLPILRALHRVYGPISVIHFDSHLDTWAPGLIGDG-DEADGINHGSYFYF--------ASQEGIMSKDANIHAGIRTPSFSDYDDDVDCGFKIIEAREIDDLGIDGIVKKIRDRV---GDNLVYLSIDIDVLDPAFAPATGTPETGGWSSREMRAILRGL-QGLKFVGADLVEVAPAYDVAEITSLAGAQLLFDIVSMMVK............... 368
4 -5.950[S] COG3876 Uncharacterized protein conserved in bacteria  ali follow..  12  24...................................................................................................................................................SPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNGVNTSLKSSVDILYENPDKLTALFGPEHAQAGDEVGSYIDEKTGVPVYSLYGKTKK--------PTPEMLKNVDILMFDIQDV-----------GTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQ-NHIEGPILEPEYASFVGIPLKHGMTIGELASLFNKIDADLTVVRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFI 293
5 -5.470[G] COG3622 Hydroxypyruvate isomerase  ali follow..  15  17.......................................................................................................................................................................FLERFDAAAKAGFAGVEYLFPYDVEAEAIKARLEANG-LEQVLFNLACHPDRVQEFREGVDKAIAYARVLGNRQVNCLAGIRPQGHDCASVEKTFVDNLRYA----ADKLEAAGIRLVMINTLDIPGYLQNTRQALEIRDKVGSANLFLQYDINHVQLADNPGRHEPGTGEINYRFLFEHLDRIGYQGWI-----CEYKPATTTEA.................................. 249
6 -5.250[D] COG0489 ATPases involved in chromosome partitioning  ali follow..  11  65................................................................................................................................................................................................................................................................SPRSSFAETLRNVKLTADVVIQERQCRVIGVISLPNEGKSVVALNLAGLIASTGKRTLVV--DADIRNPGLSRMLTTRQSAGLVSSGMRKFIDSAREACDYIIVDLAPVVPVIDAKAFAPQVDGFVFVQMVQNLMANEPQIANKTLGIVL. 261
7 -5.210[B] KOG1344 Predicted histone deacetylase  ali follow..  111.............................................................................................................................................................LRPLRTQTGGTIMAGKLAVERGWAINVGGGFHTLAIKFLFERVEGISRATIIDLDAH--------------QGNGHERDF------------------MDDKRVYIMDVYNRHPGDRFAKQAIRRKVELEWGTEDDEYLDKVERNIKKSLQELPDVVVYNAGTDILDRRMVRGRRVPISGGYQKRTARIIADSILNL--FGLGLIGPESPSVSAQNSDTPLLPPAV........................ 346
8 -5.170[R] COG1768 Predicted phosphohydrolase  ali follow..  1........................................................................................................................................MHIYGLADLHLALGVPEKTMEVDPWIGYHQKICSEWQAVVHPEDI-VLLPGDWAMNLSEAHKDFAFIGDLPKYMIRGNHDYWSSASTSK-------------ILQALPPSLYYLNQGFALLTPHLAVVGVRLWDSPTICVKKENFLTPSTQEQSYTEQDEKIFLRELGRLKRA------FAALPKEVTEVIVMTHYPPISSDGTPGPISEFLEADGRVSLCLAADYVNFVPQE...................................... 244
9 -5.130[R] COG1964 Predicted Fe-S oxidoreductases  ali follow..  12  1................................................................................................................................................MQNVESELKDIRLPYKTKSLCPECLKILEAEVYEENGKVMI--EHGEFVDVYWGDAEMFKKLLNIVLTNRCDLACWYCFFYARRAGYVYEPTIEQIREMVRKAKNMKPIGC---NAVQLTGLRDDLIDIIRMIKEEGYDHIQ---LNTNGIRLAEDDFALRVRVAGVNTVYLSFDPKILENCRRAQLGLTVIKGVNDHQLGDIIRFAAENIDIVRG--VNFQPVSLVGSMPRKEREQFRITIPDCIKAIEEQ........... 306
10 -5.120[J] KOG1253 tRNA methyltransferase  ali follow..  107.............................................................................................................................................................................TVIKEGEAEVLMHKKNQVFFNKAQVNNR---DMSIAVLRAFIIKRKQEHEAMLSKRARSSGKVVEKDVSETSKEETPTENGDDNGKTLSASGLRAL-----RYAREVGIGQVVALDNDPASVEACLMSTSKVESHLTDARVHMDFDVD-LDP------GAPSI-------LDSAVQSVADGG-LLMCTATDMAVLCGANGEVCYSKYGSYPLKGKYCHEMALRILLASIESH.. 367

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.