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Query: 4ufq_A mol:protein length:217 Hyaluronidase, from PDB1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AGENGATTTFDGPVAAERFSADTTLEAAFLKTTSETNHAATIYQAGTSGDGAALNVISDNPGTSAMYLSGTETARGTLKITHRGYADGSDKDAAALSLDLRVAGTAAQGIYVTATNGPTKGNLIALRNNTGLDDFVVKGTGRIGVGIDRAATPRAQVHIVQRGDALAALLVEGSVRIGNAATVPTSVDSSGGGALYASGGALLWRGSNGTVTTIAPALast
1 -6.960[J] KOG0407 40S ribosomal protein S14  ali follow..  14  33..............................................................................................................................................................................IYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA.. 73
2 -6.410[A] KOG0495 HAT repeat protein  ali follow..  29  6...........................................................................................................................................................................AAVIANRNKKHFLGVPAPLG----YVAGG----RGATGTRSDIGPA 46
3 -5.810[B] KOG1911 Heterochromatin-associated protein HP1 and related CHROMO domain proteins  ali follow..  20  7.................................................................................................................................................................................NPESSAKVSDAEEEEEEYAVEKGKLKWKGYPETENTWEPE 58
4 -5.790[S] COG1720 Uncharacterized conserved protein  ali follow..  32  83...................................................................................................................................................................................ATRSPHRPNPIG--LLERDGRVLKVKG-DGTVVDIKP. 126
5 -5.760[S] COG2928 Uncharacterized conserved protein  ali follow..  20  166...................................................................................................................................................................................AVFMPCTPNPTTGFLMYVLKSGAKLIVSAGLVAP.... 210
6 -5.570[R] KOG4315 G-patch nucleic acid binding protein  ali follow..  18  312.........................................................................................................................................................................................TALPRRGGSVLVLSG--RHKGVYGRLVEK... 338
7 -5.570[S] COG4737 Uncharacterized protein conserved in bacteria  ali follow..  20  28.........................................................................................................................................................................................ERADNGLIDADLGGGVIKQRGRSGGYRSL... 62
8 -5.410[L] COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain  ali follow..  13  124.GKEGMDVF--GNPVKPKPGRVPEYHLGYNVATKNNEIIATKSGILVIEPNGTIHVYDTLEVDNVDYSTGNIDFPGKVVVK----------GDVKPDFVVKAQEDITVKGVIEAATVISFNGSITAGGIKGRGKAFVKAKKTVKAVFIESAEVEAEEVQVEKNIENSAVKAINVVVSGKGGSI------RGGITIAQVKVETYFLGSPGVKTRV... 319
9 -5.370[E] COG0070 Glutamate synthase domain 3  ali follow..  20  97................................................................................................TVHLHFQGSAGQSFGAFIPKGMT----LELEGDANDYLGKGLSGGKIIVYPPKGSSFIASENIIAG-NVCLYGATAGEVYISGMVGERFCVRNSGVNTVYMTGGKVVVLGQTGR....... 215
10 -5.360[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)  ali follow..  9  706SGSGSGSSSMQPPKRMPAHLKRGSAASSPGVQSKGTENGTNGSNSSSSNSKNVAKKSADQPLSTLANTRERRSEYGQKRNVSGSRLAATPASKRKLSSKDVEQAADA-----THSDNAVDVGIIDDECGGFGAVGVMNGVASPVANNSEMDTEAEVEAEPTATKAITIHCQQPVTTPVAAAATANERLPGVA----HRRGPRRADRREEELVASAPG 918
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.