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Query: 5YSG Entity 1(prereleased), from PDB1018

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ADFEVHMLNKGKDGAGVFEPASLKVAPGDTVTFIPTDKGHNVETIKGMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTPHYGMGMVGVVQVGDAPANLEAVKGAKNPKKAQERLDAALAALGNLast
1 -51.900[C] COG3794 Plastocyanin  ali follow..  35  29SDYDIGMVSNGQEPVEGEDMATHQLTAGDTVTWANTGSRHTVTAYGSGLPEGASYFASGPGATYEVTLTVPGEYYYFCIPHEGAGMRGKLVVDD.............................. 149
2 -31.000[P] COG4454 Uncharacterized copper-binding protein  ali follow..  25  41VTQTIQVMKETPDGKMMFTPAKFEFKKGKTVRFAVKNVGHEFIKAPEMEHDNPNAISLAPGESGEIVWTNDGMFEFACL-HYEAGMRGDLKVSAK............................. 158
3 -21.600[C] COG3241 Azurin  ali follow..  24  57GNCAATVES---NDNMQFNTKDIQVKACKEFTITLKHTGHNIVIGKTEDMDGAHTKLIGGGEESSLTLDADGEYKFACTPGHGALMNGKVTLVD.............................. 183
4 -18.800[S] COG4633 Uncharacterized protein conserved in bacteria  ali follow..  26  226.................YKPERVIVEVGQPVRLDFQRHNLSKCFDKLLIPDFDLAVNLAPNQTTSVEFKYPGEYQFTCGMKM---YRGVVEVKPAT............................ 303
5 -17.100[C] COG4263 Nitrous oxide reductase  ali follow..  25  540NKVRVYMVSM----APSFGLTEFKVKQGDEVTVT-EDVTHGFV-----MVNHGVCMEISPQQTSSITFDKPGVHWYYCS-H--MEMCGRMLVEKA............................. 636
6 -11.000[Q] COG2132 Putative multicopper oxidases  ali follow..  17  67.................GMPPVLRMKKGEPFAARLVNA-HGINKMDGVPFLVQPYVNTGDHFDYAFTPPDAGTFWYH--PHCNTGLTGVIVVENPNDP.......................... 162
7 -10.200[Q] KOG1263 Multicopper oxidases  ali follow..  17  32.VWNVTYGTASPLGNGQFPGPNINSTSNNNVIVNVFNN-AGIQHRKNCWQDGTAGTMIPPGQNFTYHFDQIGSYFYY--PTTAMGGFGGLRVNSRLLI.......................... 151
8 -10.000[S] COG3738 Uncharacterized protein conserved in bacteria  ali follow..  18  144.......................DYQAGDIVSWRLDNGAHIGVVSDGFARDGTPLVIHNIGAGAQFNWRMVGHYRY................................................ 202
9 -9.550[P] COG2822 Predicted periplasmic lipoprotein involved in iron transport  ali follow..  15  30PQVKVTV------TDKQCEPMTITVNAG-KTQFIIQNHSLEWEILKGVMVVEERE-NIAPGFSQKMTANQPGEYDMTCGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQ 149
10 -8.520[R] COG3291 FOG: PKD repeat  ali follow..  21  597GKYTVTLYMDNRGGN-NFSANVSSGPAPLVVLFTDTSTGPAPSSWLWDFGDGINS---KHAMNATHTFTEPGNYTVSLTVENSAGKTDYIVVTDPVATSSSGGSS................... 721

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.