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Query: 1wva_A mol:protein length:322 Arginase 1, from PDB1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLAREGNHKPIDYLNPPKLast
1 -5.050IDP06249 hypothetical protein SP_1665 [Streptococcus pneumoniae TIGR4] NP_346104 [Streptococcus pneumoniae TIGR4]  ali follow..  13  29.............................................................................................................................................................SVIAVTKYVDVPTAEALLPLGVHHIGEEKYEALKDRDVTWHLIGTLQRRKVKDVIQKLAGEIQKRSDRVIKCFLQVNI--------SKEESKHGFSREELLEILPELARLDKIEYVGLMTMAPFEASSEQLKEIFKAA........................... 176
2 -4.990IDP02649 putative glutamic dehyrogenase-like protein [Salmonella typhimurium LT2] STM1795 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  118......KCAALNLPY--GGAKGGIRVDPFSLSEGELERLTRRYTSEIGII---PQKDIPAPDVGTNGKVMAWMMDTYSMNHGTTVTGVVTGK-PIHLGGSLGREKATGRGVFVS---GLEAARRANIAVEGARVAVQGFGNGSEAARLFAGAGARVVAIQDHT--ATLFNATGIDMKALTAWQTEHKQIAGFPGAETIASDAFWRLEMDILIPAALEQITRQRAEALTCKLVLEG-----ANGPTYPDADDVLASRGILVVPDVVCNAGGVTVSYFEWVQDMASFFWSEEEINARMDKIMTDAIVH................ 405
3 -4.880IDP92108 NADP-specific glutamate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_093180 [Toxoplasma gondii ME49]  ali follow..  11  152......KNSLTGLSI--GGAKGGSDFDPKGRSDNEVMRFCQAFMTELSRY---PNRDVPAGDIGVGAREIGYLFGQYKLLKAGQFEGALTGK-DKNWGGSAMRPEATGYGCVYFVLELLKAQNKEGIKGMRCAISGSGNVALYAGEKLATLGAKTFSDSSGYIVNEKGFPLGQIQRLETRSSTRVSEFAAKYSTVKFVPDKRAWEVPCDIAFPCATQNEISEEDAQLLIDNGCRIVEGANMP---TRDAIRLFKQHGVILCPGKAANAGGVAVSGLEMSQNAMRIEWTREVVDEKLRQIMASIFSKCRS............. 455
4 -4.850IDP04634 gene: gltA; citrate synthase [Francisella tularensis subsp. tularensis SCHU S4] FTT0071c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  225..............................................................................................FMLHADHEQNASTSTVRL-----SGSTGNSPYAAIIAGITALWGPAHGEAVLKMLSEIGSTENIDKYIAKAKDKDDPFRLMGFGYKNTDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPE----------DMFTAIFALARTSGSQWIEGRP.......................................... 412
5 -4.840IDP90228 Transcription regulator [contains diacylglycerol kinase catalytic domain] BAS4713 [Bacillus anthracis str. Sterne]  ali follow..  12  45.........................................................................TKEQGDATKYCQEFASKVDLIIVFGGDGTVF--CTNGLAPLEIRLAIIPGGTCNDFSRTLGVPQNIAEAA-----------------------KLITKEHVKPVDVAKANGQHFLNFWGIGLVSEVSNNIDALGKIGYYLSTIRTVKNAETFPVKITYDGQVYEDEVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAF............................................ 235
6 -4.830IDP93845 cobalt-precorrin-6x reductase [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001006907 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  12  1MTHDHPPIHIFG----------GTSDARLICQL-------------LDEFGERYSLSVATDAGKQLAGDIGGEVLVGRMDAAQMADFLITRQVQWVVDASHPYANQLSDNVAAACGQSNVVLTRYQRPSEIDAIHHPQLYKVDSAAAACAVAQGLGPRV--------------LLTTGSKQLAETGKTLLARVLPTAEVLSQCEALGLGV-IIALRGPFSTQFNHALYEFCQPDVV---ITKESG--VQGGYQEK---------VAPCLALNIPCIVVRRPAAVVLGSLGQQVTSLDEFTRHLMHWQQSGPLARTT...... 271
7 -4.800IDP90810 gene: folD; folD bifunctional protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0855 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  18  10........................................................................SAKIKEELKEKNQFLKSKGIESVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNNHDDSVHGILVQLPLPDHICKDLILESIISSKDVLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNL-IVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAK..................................................... 278
8 -4.780IDP02528 gene: folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase [Bacillus anthracis str. `Ames Ancestor`] GBAA4405 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  12........................................................................AEKKRAQLKEEVVKLKEQGIVPVILVGEDPASRSYVKGKEKGCEQVGIYSELIEFPETITEENGDDRINGILVQLPLPKHIEEKAIIERISPEKDVISGKHVVVIGRSNIVGKPVGQLFLNENATVTYCHSKTQNMKELTKLADILIVAVGRPKM-LCGDVDFDNVLDVASYITPVPKGVGPMTITMLLHNTVESAK..................................................... 279
9 -4.740IDP92057 mitochondrial NADPH:adrenodoxin oxidoreductase, putative [Toxoplasma gondii ME49] TGME49_061030 [Toxoplasma gondii ME49]  ali follow..  10  48.CDFPRRVCIVGA-------------GPAGFYCAKYLQKAVPDPSSL----QVDMVETLPSPYGLVRYGVAPDHPEVKHVTEDFDFVARQPGF-VTLGTD------SLDELRSLYDAV-ILAYGAAGDKPLRIPGVSGCLSAREFVGFYNAHPRRNSQETRLP------LSRASVLLRNGNV---------ALDVARLLVKAREKLHTTDIHHRALDWFSHARIRHVSVI------------GRRGWMQSSFSNKELRELVTDDKILAVVDPDDFSASLTEASLKELQDSRLKQRSRALFEQMVDNWDKRESLDRPVVH... 322
10 -4.710IDP02337 gene: gdhA; glutamate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1511 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  108......KCGIVDLPY--GGGKGGIICDPREMSFRELERLSRGYVRAISQI---PTKDIPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGK-PLVLGGSHGRETATAKGVTIC---IREAAKKRDIDIKGARVVVQGF--GNAGSFLAKFMHDAGAKVIAISDAYGALHDPNGLDIDYLLDRRDSFGTVTKLFNNTISNKELLELDCDILVPAAIEQITEENANDIKAKIVVEA-----ANGPTTLEATKILTDRGILLVPDVLASAGGVTVSYFEWVQNNQGYYWTEEEVEQRLEKVMVRSFDS................ 394

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 5 8 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24