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Query: 4ufq_A mol:protein length:217 Hyaluronidase, from PDB1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst AGENGATTTFDGPVAAERFSADTTLEAAFLKTTSETNHAATIYQAGTSGDGAALNVISDNPGTSAMYLSGTETARGTLKITHRGYADGSDKDAAALSLDLRVAGTAAQGIYVTATNGPTKGNLIALRNNTGLDDFVVKGTGRIGVGIDRAATPRAQVHIVQRGDALAALLVEGSVRIGNAATVPTSVDSSGGGALYASGGALLWRGSNGTVTTIAPALast
1 -5.650IDP91038 hypothetical protein SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3] SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  5  30.GTAS-----IGSLMYLGTQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEASVKAEDISKKEDTPKEVANVAEVQPKSSVT--------HNAEAPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQKNPTDLGVSEVTRFNVGNESNGLIGALQLFNFKVRVA-TGADGWGFLFSKG 249
2 -5.440IDP05084 putative ATP-dependent DNA helicase (together with adjacent 3 orfs) [Escherichia coli O157:H7 EDL933] Z4803 [Escherichia coli O157:H7 str. EDL933]  ali follow..  20  29.............................................................................................................................................................................IDAVVNQRRKLLVVQRTGWGAVYFIASKIFRDRGAGPTIIISP. 73
3 -5.420IDP95284 lipoprotein (ComL) [Acinetobacter baumannii ATCC 17978] YP_001086187 [Acinetobacter baumannii ATCC 17978]  ali follow..  23  75............................................................................................................................................................................GSMRNNRGQILALIQTPDQQIERVQVGNYM---GMNGRITHISP. 116
4 -5.330IDP04590 30S ribosomal protein S11 [Bacillus anthracis str. Sterne] BAS0136 [Bacillus anthracis str. Sterne]  ali follow..  31  23..............................................................................................................................................................................IRSTFNNTIVTLTDTHGNALSWSSAGALGFRGSRKSTPFAA.. 63
5 -5.200IDP05536 putative serine-aspartate-rich surface anchored fibrinogen-binding protein [Clostridium difficile 630] CD3145 [Peptoclostridium difficile 630]  ali follow..  11  260.DDSVVNRDIEGEFIVPEGGKIPRDVTLENGDKLKKGDRLTLLDSNNRGSLKVVGNYYSAGIGGGNTESGGIINGGAITAIGQESSRNTGYGAGIGGGGNGSGGDIT-----------NGGTITAKGAYHGA-------------GIGGGYYTTTKNALSPSVVDPSTGSGYGNITINGGLSYSYGGAHGGDGC-TNRGYRILVTG--GTILPYMTG 459
6 -4.770IDP95312 hypothetical protein A51_C0018 [Vibrio cholerae MZO-3] EAY41847 [Vibrio cholerae MZO-3]  ali follow..  14  570......ETSGGVQFARYVYSAEAKVDHELIKADSSTLVKVELKAGLT--ASAERCFTIRFPNTGALPLDIRYRVRESNERRIKNIGTAVLVIEGKVYGVLGASLKLGTELHIGNIEESRAGFGAQRVKPLGIKGTVPSRADYSSYAVSSLGTRGSNDNAIGAGIKAEASAFAGLEAGGMLSCKYDWTKDLGIGYCTFQNGRFIFIGIGGKFTELNPA 812
7 -4.720IDP95333 tryptophan-specific transport protein [Vibrio cholerae V51] EAZ51003 [Vibrio cholerae V51]  ali follow..  11  695EADLNSPVSTYQNLIKKRRDIGGSGSISAQFTALQGLLSFAFWLPLIPENKAMKPEQVEQVKGYSINLTYLDKH---------SREHKYEAGDLRVCITGSVYGLAAASCQLSAKLASDASEGFGIKGSTIGLLDPNIYDAYTFGGGSLRSAGQAAYAGEAAISVDAFAGVEAGGTLGATGSIDGKLSGSFGGYLLVQGGVIILVGCTGKVA..... 938
8 -4.700IDP05469 putative lipoprotein [Bacillus anthracis str. Ames] BA_2398 [Bacillus anthracis str. Ames]  ali follow..  13  46...........................................................................................................................................................................EGDLIVVYNVPGAELLPKEEEFSVVTADGTAVTVNKEGQRTKIDSS 109
9 -4.680IDP00030 tellurium resistance protein, putative BA_0926 [Bacillus anthracis str. Ames]  ali follow..  9  1.........................................MIHTLVRGQKIDVTNNHLEIRGLLVDLTWNAPMNMDVDASAFLVGFNGKITKEEDFVFYGQPYSSCRSVQLNQNETNGSKQRFSIDTHIKDEVQKIV----FSITIHNAEEKKQALRDVSHIQLKISNAQSGLEIIHFPITYPFTDESA--GELYRHGGGWKFNGYFGGLAALC.. 176
10 -4.680IDP05624 gene: mreC; putative rod shape-determining protein [Clostridium difficile 630] CD1146 [Peptoclostridium difficile 630]  ali follow..  13  166..................................................................................................................NGSGLVGIVYEVSNNYSKAISLLDSKASVSFKLAKDANAKGTITQNTTLDNKDSYNSKGYLQG---YMFDSSYNVIQGDIITTSGLGFFPDG--GEVEKVV.. 264
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.