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Query: 5Z4Q Entity 5(prereleased), from PDB1018

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTLAAYKEKMKELPLVSLFCSCFLSDPLNKSSYKYEADTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEELast
1 -6.130IDP06003 SF-assemblin, putative [Toxoplasma gondii ME49] EEB00658 [Toxoplasma gondii ME49]  ali follow..  9  28.........................................................................................RFIGFKTSIADDTRRRRMMEEQRFQEVKESISRLEKALKRRVEANRTLQRVAEQMANEMLERLQTRIAKQIEKLTISMDLLITRCEGLERSLAQMKG 128
2 -5.570IDP91309 putative translocator protein PopD [Vibrio parahaemolyticus RIMD 2210633] VP1656 [Vibrio parahaemolyticus RIMD 2210633]  ali follow..  10  263.............................................................................................................GQMANSASNVEQTKAQARSKDDEVQATRAQAAKQKADENIGFQEG-----LKELRELFRSISDSQNQAWRA...... 329
3 -5.560IDP02163 phosphodiesterase [Bacillus anthracis str. `Ames Ancestor`] GBAA3914 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  17  35.................................................................................GAANEAKRILDEANREAEALKKEALLEAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETL-DKRELQLEKKEDSLVARQQQIEELESKVGELVQ 138
4 -5.390IDP95355 phosphodiesterase [Staphylococcus aureus subsp. aureus str. Newman] YP_001332229 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  11  34.................................................................................QARQTAEDIVNQAHKEADNIKKEKLLEAKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSDLL-DKKDEILEQKESKIEEKQQQVDAKESSVQTLIM 137
5 -5.370IDP92248 hypothetical protein FTN_1133 [Francisella novicida U112] FTN_1133 [Francisella tularensis subsp. novicida U112]  ali follow..  15  32.....................................................................................................NESDDNIKIKKLYSALVKESIRRETAERLAKDAKSYCDLVQEQAKQRISDLKESLESQITFLTQQIKESAKNLDYYRNELKK... 117
6 -5.330IDP06007 SF-assemblin, putative [Toxoplasma gondii ME49] EEB04771 [Toxoplasma gondii ME49]  ali follow..  12  18.........................................................................................RIHGFEKQMECEAKQRREGEEGRLLAIREAITKLEKTLNAEIKRRVEANKALQAMFESQLLGVQDKLSSVFVEKFEQLQCALDALND.......... 104
7 -5.260IDP92249 hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] FTT_1152 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  32.....................................................................................................NESDDNIKIKKLYSALVKESIRHETAERLAKDAKSYCDLVQEQAKQRISDLKESLESQITFLTQQIKESAKNLDYYRNELKK... 117
8 -5.260IDP92250 hypothetical protein FTL_0803 [Francisella tularensis subsp. holarctica LVS] FTL_0803 [Francisella tularensis subsp. holarctica LVS]  ali follow..  14  32.....................................................................................................NESDDNIKIKKLYSALVKESIRHETAERLAKDAKSYCDLVQEQAKQRISDLKESLESQITFLTQQIKESAKNLDYYRNELKK... 117
9 -5.250IDP05688 hypothetical protein lmo1601 [Listeria monocytogenes EGD-e] lmo1601 [Listeria monocytogenes EGD-e]  ali follow..  6  80...........................................................................................DSAGGFVDVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQEAAKKAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKDEAKKIASDVKKEVK 174
10 -5.250IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  9  1MINRDNKKAITKKGMI------------SNRLNKF---------------SIR---KYTVGTA-SILVGGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTN 162
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.