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current user: public |
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Query: 2w0c_P mol:protein length:104 PROTEIN P3, from PDB1018 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 | |||||||
# | Score | Template | Links and tools | %id | First | MNTSVPTSVPTNQSVWGNVSTGLDALISGWARVEQIKAAKASTGQGRVEQAMTPELDNGAAVVVEAPKKAAQPSETLVFGVPQKTLLLGFGGLLVLGLVMRGNK | Last |
1 | -7.490 | sp|Q14135|VGLL4_HUMAN Transcription cofactor vestigial-like protein 4 OS=Homo sapiens GN=VGLL4 PE=1 SV=4 | ali follow.. | 14 | 220 | .NYKEPEPAPNSVSITGSVDDHFAKALDTWLQIKAAKDGASSSPESASRRGQPASPSAHMVSHSHSPSVVS................................. | 290 |
2 | -6.320 | sp|Q8TD84|DSCL1_HUMAN(removed signalp:1-18) Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens GN=DSCAML1 PE=1 SV=2 | ali | 12 | 1 | .........PKGTWAWQGLRANSSGEVATWYEL-RMRA-CNSAGCGNETAQFATLDYDGST--IPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKR | 98 |
3 | -5.940 | sp|Q6ZUL3|CH086_HUMAN Uncharacterized protein C8orf86 OS=Homo sapiens GN=C8orf86 PE=2 SV=1 | ali follow.. | 20 | 99 | .QPLLHVTAYENTGHWERLASVVSSTLDSFLVLEPIKLFPVSSGSCRESIRISGELIGNA----HSPAPPRTP-ELETLGWDKQAVLSGAQVILVCAEV..... | 223 |
4 | -5.880 | sp|Q9HC10|OTOF_HUMAN Otoferlin OS=Homo sapiens GN=OTOF PE=1 SV=3 | ali | 17 | 114 | ................................LTAEEAEKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLLAL.... | 181 |
5 | -5.800 | sp|A6NN04|L37B1_HUMAN Putative LRRC37B-like protein 1 OS=Homo sapiens PE=5 SV=2 | ali follow.. | 14 | 93 | .TLKTDCSETYVQVTCAKLISRTGLLMRLLSEQQEVKASKAEWDTDQWKTKNYINESTEAQSEQKEQKSSELTKEVPGYGYNNKLILVISVTVILTILIL.... | 191 |
6 | -5.720 | sp|Q8N3S3|PHTF2_HUMAN Putative homeodomain transcription factor 2 OS=Homo sapiens GN=PHTF2 PE=2 SV=2 | ali | 15 | 86 | ......TLGSETSKKYSNTSILLTEQINLYLKMEKKPNKKEELTLVNNVLKLATKL----LKELDSPRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFN... | 177 |
7 | -5.710 | sp|Q9BQT9|CSTN3_HUMAN(removed signalp:1-19) Calsyntenin-3 OS=Homo sapiens GN=CLSTN3 PE=1 SV=1 | ali | 7 | 119 | ......SDPKDPDLFWDD--SALTIIVNPMESYQNRQSCVTGAVGGQQEDEDSSDSEVADSPSSDERRIIETPPHR............................ | 186 |
8 | -5.660 | sp|A9Z1Z3|FR1L4_HUMAN Fer-1-like protein 4 OS=Homo sapiens GN=FER1L4 PE=2 SV=1 | ali | 13 | 198 | ..................LTGKVEAEFEL---LTVEEAEKRPVGKGRKQPEPLEKPSRPKTSFNWFVNPLKTFVFFIWRRYWRTLVLLLLVLLTVFLLLV.... | 276 |
9 | -5.610 | sp|Q92508|PIEZ1_HUMAN Protein PIEZO1 OS=Homo sapiens GN=FAM38A PE=1 SV=4 | ali | 19 | 1 | ISQSLLYRGPVDPANWFGVGFPNLGYIQNHLQVLLLLVFEAIVYRRQEHYRRQHQLAPLPAQAVFASGTRQQLDQDLLFGLEICFLMA-LVTLHGCWLVA.... | 124 |
10 | -5.600 | sp|Q9UMS5|PHTF1_HUMAN Putative homeodomain transcription factor 1 OS=Homo sapiens GN=PHTF1 PE=2 SV=2 | ali | 14 | 63 | ......SLGSETNKKYSNVSILLTEQINLYLKMEKKPNKKEQLTLVNNVLKLSTKL----LKELDTPRLYGLTMNPLIYNITRVVILSAVSGVISDLLGFN... | 154 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51. |