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Query: 3mmr_A mol:protein length:413 Arginase, from PDB1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMASKNVSIIGSPLAAGQPLGGVQLACDDLRKLGLHNVIDVLGWKYEDIGNIDNGDNEMKQEKKTNNYINNNDNNNDNNNDNNNDNNNNCYIPNGVIKEKKHDLSNNKMNGYVNHNFYGNYEENNVISTNDKYKNNCYYDNIRNIKEIGIFSKNLFDTMSNELRKKNFVLNIGGDHGVAFSSILSSLQMYQNLRVIWIDAHGDINIPETSPSGNYHGMTLAHTLGLFKKKVPYFEWSENLTYLKPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISLDIDSVDNVFAPGTGTVAKGGLNYREINLLMKILAETKRVVSMDLVEYNPSLDEVDKKVHGDSLPILDNATKTGKLCLELIARVLGYDIVLast
1 -70.600sp|P05089|ARGI1_HUMAN Arginase-1 OS=Homo sapiens GN=ARG1 PE=1 SV=2  ali follow..  31  2.............SAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIP----------------------------------------------------------------------------NDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVA-----------ITLACFGLA.. 307
2 -68.900sp|P78540|ARGI2_HUMAN Arginase-2, mitochondrial OS=Homo sapiens GN=ARG2 PE=1 SV=1  ali follow..  29  7LSRLLQTRVHSILKKSVHSVAVIGAPFSQGQKRKGVEHGPAAIREAGLMKRLSSLGCHLKDFGDLSFT---------------------------------------------------------------------------PVPKDDLYNNLIVNPRSVGLANQELAEVVSRAVSDGYSCVTLGGDHSLAIGTISGHARHCPDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLLRELQDKVPQLGFSWIKPCISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLIGKRQRPIHLSFDIDAFDPTLAPATGTPVVGGLTYREGMYIAEEIHNTGLLSALDLVEVNPQLATSEEEAKTTANLAVDVIASSF................ 323
3 -58.000sp|Q9BSE5|SPEB_HUMAN Agmatinase, mitochondrial OS=Homo sapiens GN=AGMAT PE=1 SV=2  ali follow..  17  69.................................................................................EGLDAAFIGVPLDTGTSNRPGARFGPRRIREESVMLGTVNPS-----TGALPFQSLMVADLGDVNVNLY---------NLQDSCRRIQEAYEKIVAAGCIPLTLGGDHTITYPILQAMAKKHGPVGLLHVDAHTDTTDKA-LGEKLYHGAPFRRCV--------------DEGLLDCKRVVQIGIRGSTLDPYRYNRSQGFRVVLAEDCWMKSLVPLMGEVRQQM---GGKPIYISFDIDALDPAYAPGTGTPEIAGLTPSQALEIIRGC-QGLNVMGCDLVEVSPPYDLSGNTALLAANLLFEMLCALPK............... 348
4 -6.040sp|P43304|GPDM_HUMAN(removed signalp:1-23) Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Homo sapiens GN=GPD2 PE=1 SV=3  ali   13  35........................................................................................................................................................................EAQLLTLQNTSEFILVIGGG---ATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHG----------------------------------GVRYLQKAIMKLDIEQ----------------RMVKEALHERANLLEIAPHLSAPLPIMLPVYKWWQLPYYWVGIKLYDLVAGSNCLKSSYVLSKSRALEHFPMLQKDK---LVGAIVYYDGQHNDARMNLAIALTAAGAATA 221
5 -6.010sp|Q5T6J7|GNTK_HUMAN Probable gluconokinase OS=Homo sapiens GN=C9orf103 PE=2 SV=1  ali follow..  12  1...............................................................................................................................................................................MAAPGALLVMGGSGKSTVGALLA-----SELGWKFYDA--DDYHPEENRRKMGKGIPLN---DQDRIPWLCNLHDILLRDVASGQRVVLACSALKKTYRDILTQGKDGVALKCEESGKEAKQAEMQLL----------VHLSGSFEVISGRLLKREGHFMPPEL-LQSQFETLEPPAAPENFIQISV............................................. 169
6 -5.920sp|Q13415|ORC1_HUMAN Origin recognition complex subunit 1 OS=Homo sapiens GN=ORC1L PE=1 SV=2  ali   21  207..................................................................................................................................................................................................................................................................................................REQEFQDIYNFVESKLLDHTGGCMYIS----------VPGTGKTA----TVHEVIRCLQQAAQANDVPPFQYIEVN-------TEPHQVYVQILQKLTATANHAAEL.......... 300
7 -5.880sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens GN=EIF2B4 PE=1 SV=2  ali follow..  10  310..............................................................................................................................................................EKIVLAAQAISRFAYQKISNGDVILVYGC-SSLVSRILQEAWTEGRRFRVVVVDSR------------WLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLG---------------------AHALLANGMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELD-DPDDLQCKRGEHVALANWQNHASLRLNLVYD------VTPPELVDLVITELGMIPCSSVPVVL..... 516
8 -5.690sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens GN=EIF2B1 PE=1 SV=1  ali follow..  13  101.............................................................................................................................................................LRRISLSRNKIADLCHTFIKDGATILTHAYS-RVVLRVLEAAVAAKKRFSVYVTESQP-----------DLSGKKMAKALCHLNVPVTVVLDAAVGYIMEKADLVIVG---------------------AEGVVENGINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFP--------------NQQDVPDKFKYKADTLKVDLKEEHPWVD------YTAPSLITLLFTDLGVLTPSAVSDELIKLYL 305
9 -5.640sp|Q13733|AT1A4_HUMAN Sodium/potassium-transporting ATPase subunit alpha-4 OS=Homo sapiens GN=ATP1A4 PE=1 SV=3  ali   13  3.....................................................................................................................................................................AAVPDAVSKCRSAGIKVIMVTGDHPITAKAIA------KGVGII-LKIPISKVDASAAKAIVVHGAELKDIQSKQLDQILQNHPEIVFARTSPQQKLIIVEGCQRLGAVVAVTGDGVNDSPALKKADIGIA---------MGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIM-------TLTSNIPEITPFL-----LPLGTITILCIDLGTDMVPAISLAYESAESDIM 238
10 -5.610sp|Q53GQ0|DHB12_HUMAN(removed signalp:1-29) Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens GN=HSD17B12 PE=1 SV=2  ali follow..  10  19................................................................................................................................................................................GLGEWAVVTGSTDGIGKSYAEELAKH--GMKVVLISRSKDKLDQVSSEIKEKFKVETRTIAVDFASEDIYDKIKTGLAGLEIGILVNVGMSYEYPEYFLDVPDLDNVIKKMININILSVCKMTQLVLPGMVERSKGAILNISSGSGMLP--VPLLTI----SATKTFVDFFSQCLHEEYRSKGVFVQSVLPYFVATKLAKIRKPTLDKPSPETFVKSAIKTVGL....... 236

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 3 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.