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Query: 4njg_A mol:protein length:230 7-carboxy-7-deazaguanine synthase, from PDB1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMTYAVKEIFYTLQGEGANAGRPAVFCRFAGCNLWSGREEDRAQAVCRFCDTDFVGTDGENGGKFKDADALVATIAGLWPAGEAHRFVVCTGGEPMLQLDQPLVDALHAAGFGIAIETNGSLPVLESIDWICVSPKADAPLVVTKGNELKVVIPQDNQRLADYAKLDFEYFLVQPMDGPSRDLNTKLAIDWCKRHPQWRLSMQTHKYLNIPLast
1 -23.300sp|Q6NUM6|TYW1B_HUMAN tRNA wybutosine-synthesizing protein 1 homolog B OS=Homo sapiens GN=TYW1B PE=2 SV=2  ali   10  1.NEDGERRAMITPALREALTKQVDAPRERSLLQ-ESHRCMETTACANKCVFCGTEWLWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLGEPIMYPEIRFLKLLHQCKISSFLVTNAQFRNLEPVTQLYVSVDASTKDSLKKIDKDFWQQFLDSLKALAVKQQRTVYRLMLVKAWNELQAYAQLVSLGNPDFIEVK............ 239
2 -21.900sp|Q9NV66|TYW1_HUMAN tRNA wybutosine-synthesizing protein 1 homolog OS=Homo sapiens GN=TYW1 PE=1 SV=2  ali   11  114..........................................LACANKCVFCGTEWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLGEPIMYPEIRFLKLLHQCKISSFLVTNAQFRNLEPVTQLYVSVDASTKDSLKKIDKDFWQRFLDSLKALAVKQQRTVYRLTLVKAWNVDE--LQAYAQLVSLGNPDFI........... 300
3 -21.400sp|Q8WXG1|RSAD2_HUMAN(removed signalp:1-15) Radical S-adenosyl methionine domain-containing protein 2 OS=Homo sapiens GN=RSAD2 PE=1 SV=1  ali follow..  15  65.........................................TRQCNYKCGFC------------------HTAKTSFVLPLEEAKRGLLLLKEA--GMEKINFSGGEPFLQDRGEYLGKLVRF-PSVSIVSNGSLNYGEYLDILAISCDSFDEEVNVLIGRGQ-----------------------------GKKNHVENLQKLRRWCRDYRVAFKINSVI... 209
4 -18.700sp|Q9NZB8|MOCS1_HUMAN Molybdenum cofactor biosynthesis protein 1 OS=Homo sapiens GN=MOCS1 PE=1 SV=3  ali   13  43VSRRRQFLREHAAPFSAFLTDSF----------GRQHSYLRIS-CNLRCQYC------------MPEEGVPLTPKANLLTTEEILTLARLFVKE--GIDKIRLTGGEPLIRPDVDIVAQLQRLE-TIGVTTNGINLARLLPQLISLDTLVPAKFEFIVRRKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNEDE-----LLDFAALTEGLPLDVRFIEYM... 249
5 -17.200sp|Q6NUM6|TYW1B_HUMAN tRNA wybutosine-synthesizing protein 1 homolog B OS=Homo sapiens GN=TYW1B PE=2 SV=2  ali   12  202............................................CANKCVFCGTEWLWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLGEPIMYPEIRFLKLLHQCKISSFLVTNA........................................................................................... 300
6 -15.800sp|Q9NV66|TYW1_HUMAN tRNA wybutosine-synthesizing protein 1 homolog OS=Homo sapiens GN=TYW1 PE=1 SV=2  ali   13  1.......................................................................ENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLGEPIMYPEIRFLKLLHQCKISSFLVTNAQFP-LEPVTQLYVSVDASTKDSLKKIDKDFWQRFLDSLKALAVKQQRTVYRLTLVKAWNVDE--LQAYAQLVSLGNPDFIEVK........ 153
7 -11.200sp|Q9HA92|RSAD1_HUMAN Radical S-adenosyl methionine domain-containing protein 1, mitochondrial OS=Homo sapiens GN=RSAD1 PE=2 SV=2  ali follow..  11  8...ARGWAAAARAAQRRRRVENAGGSPSPEPAGRRAALYVHWPYCEKRCSYCN-------------FNKYIPRRLEEAAMQKCLVTEAQTLLRLSGVVESVFFGGGTPSLASPHTVAAVLEPADLEVTLEAN------------------PTSAPGSRLAEFGAAGVNRLSIGLQSLDDTELRLLGRTHSACDALRTLAEARRLFPGRVSVDL------MLGLP 201
8 -10.800sp|O75380|NDUS6_HUMAN(removed signalp:1-17) NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Homo sapiens GN=NDUFS6 PE=1 SV=1  ali follow..  12  48...ENFAIDLIAEQPVSEVETRVIACDGGGGALGHPKVYINLDTKTGTCGYCGLQFRQH..................................................................................................................................................................... 105
9 -9.160sp|Q96SZ6|CK5P1_HUMAN CDK5 regulatory subunit-associated protein 1 OS=Homo sapiens GN=CDK5RAP1 PE=1 SV=2  ali   11  66...AVAESGQQAANVLLSLDETYADVMPVQTSASATSAFVSIMGCDNMCSYCIVPFT---------------RGRERSRPIASILEEVKKLSEQLQGLKEVTLLGRDNSEVQFNSAVPTNLSRGFTTNLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIHERDNICKQIHLPAQSGSSR----VLEAMRRGYSREAYVELVHHIRESIPGVSLSSDF--IAGFC 297
10 -8.840sp|Q5VV42|CDKAL_HUMAN CDK5 regulatory subunit-associated protein 1-like 1 OS=Homo sapiens GN=CDKAL1 PE=1 SV=1  ali follow..  10  202.................................NPLIEIISINGCLNACTYCKTKHA---------------RGNLASYPIDELVDRAKQSFQ--EGVCEIWLTSGRDIGTNLPTLLWKLVEV-----------IPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASD---VLMEMKREYCVADFKRVVDFLKEKVPGITIATDI--ICGFP 367
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 4 6 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.