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Query: 5lzs_l mol:protein length:51 Uncharacterized protein, from PDB1018

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50
# Score Template Links and tools%idFirst MSSHKTFRIKRFLAKKQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGLLast
1 -42.500sp|Q59GN2|R39L5_HUMAN Putative 60S ribosomal protein L39-like 5 OS=Homo sapiens GN=RPL39P5 PE=5 SV=2  ali follow..  92  1MSSHKTFKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLGL 51
2 -42.500sp|P62891|RL39_HUMAN 60S ribosomal protein L39 OS=Homo sapiens GN=RPL39 PE=2 SV=2  ali follow..  98  1MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL 51
3 -42.500sp|Q96EH5|RL39L_HUMAN 60S ribosomal protein L39-like OS=Homo sapiens GN=RPL39L PE=1 SV=3  ali follow..  92  1MSSHKTFTIKRFLAKKQKQNRPIPQWIQMKPGSKIRYNSKRRHWRRTKLGL 51
4 -6.670sp|Q9BWK5|MRI_HUMAN Modulator of retrovirus infection homolog OS=Homo sapiens GN=MRI PE=2 SV=2  ali follow..  17  4.............LQSETKTRVLPSWLTAQVATKNVAPMKAPKRMRMA... 38
5 -5.550sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo sapiens GN=TDRD6 PE=2 SV=2  ali   10  13........LEITILEIRRDVCDIPLAVDLKSKGKSINEKMEKYSK...... 50
6 -5.190sp|Q16626|MEA1_HUMAN Male-enhanced antigen 1 OS=Homo sapiens GN=MEA1 PE=1 SV=2  ali follow..  15  133MDPEHVELVKRTMAGVSLPAPGVPAWAREISDKALQARQASPAWK...... 185
7 -5.140sp|Q9NRM7|LATS2_HUMAN Serine/threonine-protein kinase LATS2 OS=Homo sapiens GN=LATS2 PE=1 SV=2  ali   38  270..............KKQIQTSPVP----------VRKNSRDEEKRESRIK. 295
8 -5.100sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo sapiens GN=SEC16A PE=1 SV=3  ali   26  133..........RWLPGKKKTEAYLPD-----KNKSIVWDEKKNQW....... 162
9 -5.000sp|P08648|ITA5_HUMAN(removed signalp:1-41) Integrin alpha-5 OS=Homo sapiens GN=ITGA5 PE=1 SV=2  ali   16  184LPQKERQVATAVQWTKAEGSYGVPLWI-LLLGLLIYILYKLGFFKRSL... 239
10 -4.880sp|P00519|ABL1_HUMAN Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4  ali   27  3............LIKKKKKTAPTPP-KRSSSFREMDGQPERR......... 31
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;