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Query: 1wva_A mol:protein length:322 Arginase 1, from PDB1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSAKSRTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLAREGNHKPIDYLNPPKLast
1 -3.780HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  10  3...............................................................TNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEGAKINLVGSLR--------TGLLMKHRDIDFHIYSSPLNLTDSFQAMARLAEN-----PSIKRIECANLLHTAEACIEWHAWYQNEENELW--QMDMIHIREGSRYDGYFEKVAQRISEIMTDEIRETI---LRLKYETPETEKIIGVEYYQAVIRDGVRDYSGFKEWRKQHPVTGVVEWMP.......................................... 203
2 -3.310PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF  ali follow..  6...........................................................................HNTKVTVRLRKSAYRNEWYLYI---YPVYTAGKSEPQRVREYLNRIVTTVVWDKTRTARTTSSSKSYKPKRDLNGVIQCKSEVDQEACIYADEVRKLRQREYQAEQKERLQQNFIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGENLPFFIDNAFAEEYKRFLLTAP........................................................................... 189
3 -2.640PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;  ali follow..  16  1..................................................................................................................................................................................MANLDVSRSSFRRRFRLGVQEQQYLANKGMETILEHGKDFIAQR------LAPAEIPNDGKQTPCKGHPVATGTCCRGCIEKWHRIEAGKSLSQEEQAYI............................................ 104
4 -2.400PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)  ali follow..  22  251.....................................................................................................................................................................................................................................TFDLDAVDSD-----GNPK--HLDHADFIRIQSGVLQQCGWTGETSTEVGRITN....................................... 298
5 -2.400PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)  ali follow..  10...............................................................................................................................................................................................DEAVDFCRKRGLEFYAVNSNMPEEEADMSALRSRKVSADMYID--DRNLGGLPD............................................................................. 61
6 -2.300PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  11  4TKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFIRYDAMVY.................................................................................................................................................................................................. 146
7 -2.150HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;  ali follow..  13  3...............................................................................................................................................................................................................VSILFQKARKVLNNERGEANYFSTVVFIFIAVLLLAFIIDLFSIISTKELDHAADQMVKQIQLSGGVNGETDELFEFLSSQIEGAENISYSI....................... 95
8 -1.820PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  10  93...................................................................................................................................................................................................................WIRLSRKKLNEGVDEAWAVFDKD------------------EHPARKDAFEEAEKLIDDKKVNIAFSSRSFE-EYLYHPFHATECGERIDGKKVNYNCM............ 179
9 -1.770HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  15  3..........................................................................................................................................YLHARGLFHVL------------------LICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQR........................................................................................................ 65
10 -1.760PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  4..................................................................................................................................................................................................................................ISVPRDLTKVKSKVM--------FNLTKRQLICFGMAV-------LIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLAMYEKNGQPLEVIL.... 80

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 5 8 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24