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Query: 3q4o_A mol:protein length:196 Uncharacterized protein MJ0754, from PDB1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSSSGLVPRGSHMQPISEEEKEGLIEMREEEKLARDVYLTLYNKWKLQIFKNIAESEQTHMDAVKYLLEKYNIPDPVKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGATIEDLDIADLEKWINKTDNEDIKFVYENLMKGSRNHMRAFVRMLNNYGSNYTPQYISKEEYEEIISSSTERGMNRLast
1 -3.260PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  11  5..........TDASLQKAAGEGMDEFIQVFTDK-----YKEVIGGELTAETMPLLTGEQHS-LLAYQIFRDEVMFGGFCQLIQNGYGGYIFDNPFAKVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMAMYEQYEAFDDLEEEYLD-IEEEVTALVASYVDD--HLELFAKIV.......... 165
2 -3.200PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  11  108..................DAEIAKMLKDQFAQSRK-EKYYNEFSKILSQKQIMKIYQQEKSNMNKFRKEFDR...................................................................................................................... 165
3 -3.110HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;  ali follow..  8  104...............EAFGIFDNQSIEKSLVSKNPLVRILALLDRRLGKRRLLALEESMEQELDWVRAFYV....................................................................................................................... 159
4 -2.780PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  9  32.............SLTRIRKEYIDKFDYTDEQKEEEEDWFGDLVRMMNQE-----GCRENGHLQINKVVMQALT---ELHTQLLASSKFPFYSAEYYRVLPFIVELRGKTKQVADRMARKNEANLKEIAANLGHSEVETCFDVLSRETETAVKEITTLIGMLSDYYQKDKTEGLQF.............. 199
5 -2.710PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  8  35.....................................................................................................................DKSPNGKWASLYERYLQEKHPHEYVRLIWADEALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQ..... 104
6 -2.520HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  11  2.................................KVEVHYFDELLER-----IRDIRASEKRVYRKVKEIFALSVDYDSKSQVAQSFFKSVQNKLEYA-----TGHTAPELIAKRADASKDNMGLTSFKGVKVRRGDVTVAKNYMTHEEISTLNLIVNMYLDYAELQAKG-MHMADWESKLGD........ 143
7 -2.470PB177066 Q891G9_CLOTE/1-159 PB177066; Pfam-B_177066;  ali follow..  14  14......................................................................................................NDTQKNDLFYVCCLIEFIGRKTKNRRSIIVQKLGKKELIRQLDIAEANHCLSFEQVSDEIIEYFN---IQEGDFHTV........... 87
8 -2.410PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  8  32.....................................TFWFALVEHVNRKGQYKVFRKEPKDSDIWNFIAKKLPSSHADSIPQPKKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQKR....................................... 160
9 -2.370PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  8  44..................SHLADHAFAYLAATDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHLASFAIHHDSILEINSHGDTPASGAEHSGCARNLTPAQLDRFYQLLKFDCLCRDRSRNFPGWMPPSPLTEEERSNWMARITTPRSMEKYMPG-LVKESPANLRRHGFIELFPCHPERPEED.... 229
10 -2.360PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  7  1.....................MTDSLFWAIDIKNQFHHNWMGMSQNITDQVLENFTDALDCLTAHLSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLVRLEHHLSHPGIRTLLHKAGYKDDAD---CEGMLLELRSRIGGNNSFPHEIGLFIGYPAK..... 182
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.