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current user: public |
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Query: 5lzs_l mol:protein length:51 Uncharacterized protein, from PDB1018 |
. 10 . 20 . 30 . 40 . 50 | |||||||
# | Score | Template | Links and tools | %id | First | MSSHKTFRIKRFLAKKQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGL | Last |
1 | -4.460 | HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; | ali follow.. | 23 | 53 | .............FKPVKKTLSIPGWLNDAAESAINFSSVLQKGLKSELGM | 91 |
2 | -2.470 | PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708; | ali follow.. | 21 | 1 | ..................MNEGIPEQLIRRLSDASRL.............. | 19 |
3 | -2.280 | PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694; | ali follow.. | 31 | 3 | ...................RRSVPKSI--RKRRKWRFTVWRRSWAATS... | 34 |
4 | -1.840 | PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051; | ali follow.. | 11 | 193 | .........RQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNW....... | 227 |
5 | -1.030 | PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473; | ali follow.. | 15 | 73 | ....LTFRLNARYGEKLLSGKRHPRYLIHRRRLFRLLTKRRK......... | 114 |
6 | -0.850 | PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339; | ali follow.. | 11 | 70 | ...........................RVTAKEAFKWDSSTEKW....... | 86 |
7 | -0.724 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali follow.. | 16 | 6 | AIPMKAFDPNYKLLDEMYQDDYYPAFLVDKVKDELQ............... | 41 |
8 | -0.716 | HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; | ali follow.. | 17 | 92 | ISSEKKIESAIRIVGNENPYHPIRDYLN....................... | 119 |
9 | -0.706 | PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205; | ali follow.. | 7 | 80 | .....PLFLVWGADKYKTDGKSLFSFVR----SWITFRLRKHQSSRLV... | 118 |
10 | -0.699 | PB001565 Q6LS01_PHOPR/1-384 PB001565; Pfam-B_1565; | ali follow.. | 18 | 3 | .........KEHLLKK-RWNKPVVNMVVLTKQFVLSTLVTNKRCHTT.... | 39 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26; |