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Query: 5t5h_Z mol:protein length:113 60S ribosomal protein L26, from PDB1018

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSRRKARRAHFQAPSHVRRILMSAPLSKELRAKYNVRAMPVRKDDEVRVKRGAYKGREGKVTACYRLRWVIHIDKVNREKANGTTVPVGVHPSNVEITKLKLNHNRKAILERKLast
1 -4.690PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  26  13TPPRKRRKWRFTV--RRSWAATSKPPSGNLPKSGETRKQPTIKNEFINEKR.............................................................. 62
2 -2.630HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  10  5..............DFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPEL.................................................... 51
3 -2.470HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  9  1.....MRKFNY------KRLIVMLVVVLAITCLMATTAFAAGTGDVAGAVESTWSTASTQIKSVVDNVVFPAIDLI..................................... 65
4 -2.300PB012954 Q5LF97_BACFN/1-383 PB012954; Pfam-B_12954;  ali follow..  8  288IRKKTAVQQLEQNILFTFDYPEEIPAHESRTFTVAMNKFTIPDKKRLIIEIQERNGGRHFLYKLKNKS---------------------LTAEEVFRSRKQTEDEADKILRR. 381
5 -2.300HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali follow..  9  4...........SAPPILKTLKTKDMIAKTILQQIGGKRFTAMTG..................................................................... 36
6 -2.260PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  14  135.................KNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPD----IRGVLVVAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKK 226
7 -2.210PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  10  12..............................GQHIEKKNLRTDDGLRLEILSGWWNNEEGP----DFKHAEFFLEGKGLIRGS---VEIHVFASDWIHHKHENQKTYDAVC... 85
8 -2.180PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali follow..  16  2....KIKFLSFIASFFMVSFVITSCLDDD-------NNIEYSPDATIHAF---------ALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKIL............... 79
9 -1.770PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  16  16..................................DIESQTILKDAAATALYGS-RGANG-VVLITTKSGRRGKTHIAFTAEYGTS............................ 64
10 -1.760PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  12  2.....RVPRRSWPPRRFPPVLLSGAVTLKRMPQPVTALLAAMITPAVLISG--IMSTSTRVGRATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFLMR. 110
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A.,Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J. The status of structural genomics defined through the analysis of current targets and structures. Pac Symp Biocomput. 2004;:375-86.