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Query: 5NQJ Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRFLPCIATLAATASALAIGDHVRSDDQYVLELAPGQTKVVTEAEKWALRAEGKRFFDITERASSLELASNKKQKLAVTYPDSVQHNETVQNLIKSLDKKNFETVLQPFSEFHNRYYKSDNGKKSSEWLQGKIQEIISASGAKGVTVEPFKHSFPQSSLIAKIPGKSDKTIVLGAHQDSINLDSPSEGRAPGADDDGSGVVTILEAFRVLLTDEKVAAGEAPNTVEFHFYAGEEGGLLGSQDIFEQYSQKSRDVKAMLQQDMTGYTKGTTDAGKPESIGIITDNVDENLTKFLKVIVDAYCTIPTVDSKCGYGCSDHASATKYGYPAAFAFESAFGDDSPYIHSADDTIETVNFDHVLQHGRLTLGFAYELAFADSLLast
1 -5.180tr|E7ES18|E7ES18_HUMAN Uncharacterized protein OS=Homo sapiens GN=PKD1 PE=4 SV=1  ali   4..............................................................................................................................................................................................QGPLTPLAQQDGLSAPHEPVEAGMGSVELRRPPAHQVMVFPGSREAFLTTAEFGTQELRRPAQLRLQV....................................................................................................................... 74
2 -4.960sp|Q9HCD6|TANC2_HUMAN Protein TANC2 OS=Homo sapiens GN=TANC2 PE=1 SV=3  ali   11  13................................................................................AYTCLVPEFVHNVAALLCRSPQLTAYREQLLREPHLQSMLSLRSCVQDPMASFRRGVLE---------------PLENLHKERKIPDEDFIIL---IDGLNE----------EFHKPDYGDTIVSFLSKMIG-------KFPSWLKLIVTVRTSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHR............................................................................................................ 167
3 -4.640tr|D6REK9|D6REK9_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   13  1...........................................................................................................................................................................MILAL---CNFRLLGSSDSPVSGSGVAGTTGMRHNTREK....................................................................................................................................................................... 36
4 -4.580sp|A7E2V4|K0913_HUMAN Zinc finger SWIM domain-containing protein KIAA0913 OS=Homo sapiens GN=KIAA0913 PE=1 SV=1  ali   14  6................................................................................ASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTA-YLDESTLTDNIKKTLHKFCGPSPVVFSDVNSMYLSSTEPPAAPLRGREPEGVWNLLSIVREMFKRRDSNAAPLLEILTDQCLTYEQ............................................................................................................................................... 176
5 -4.550sp|Q9C0D5|TANC1_HUMAN Protein TANC1 OS=Homo sapiens GN=TANC1 PE=1 SV=3  ali   10  12................................................................................TYTCLVPEFVHSIAALLCRSHQLAAYRDLLIKEPQLQSMLSLRSCVQDPVAAFKRGVLE---------------PLTNLRNEQKIPEEEYIIL---IDGLNE----------EFHKPDYGDTLSSFITKIIS-------KFPAWLKLIVTVRANFQEIISALPFVKLSLDDFPDNKDIHSDLHAYVQHR............................................................................................................ 166
6 -4.470tr|F8W9Z4|F8W9Z4_HUMAN Uncharacterized protein OS=Homo sapiens GN=AMBRA1 PE=4 SV=1  ali   14  1..................................................................................................................................................................YSG------AILAH----KLRLPGSCHSPASASQVAGTTGAHHLVEMEFHHVSQAGLELLTSGDLPTSASQSAGITGVSHRAW.................................................................................................................................... 82
7 -4.280sp|Q8WUJ1|NEUFC_HUMAN Neuferricin OS=Homo sapiens GN=CYB5D2 PE=2 SV=1  ali   16  1............................................................................................................................................................................TGRFYG----------------EDGLPTPALTQVEAAITRGLEANKLQLQEKQTFPPCNAEWSSARGSRLWCSQKS-------GGVSRDWIGVPRKLYKPGAKE..................................................................................................... 81
8 -4.070sp|Q6P387|CP046_HUMAN Uncharacterized protein C16orf46 OS=Homo sapiens GN=C16orf46 PE=2 SV=2  ali   11  1.........................................................................................................................................................................................PTYTCPDGKSEKNHVYCLLDVSDITLEQD-------EKAKEFIIGTGWEEAVQGRKIPKKARVGEGACSDCLVCVNL................................................................................................................... 82
9 -4.040sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3  ali   10  11........................................................................................QMCELLSYLCDCELQHRVEAIVAFGDIYVSKLQANQKFRYNELMQALNMSAALTARKTKEFRSPPQEQINMLLNFQLGENREELYDFHEDLLLHCGVPLEEEEEEEEDTSWTGKLCALV.......................................................................................................................................................................... 136
10 -4.010sp|Q86UD0|CI140_HUMAN Protein C9orf140 OS=Homo sapiens GN=C9orf140 PE=2 SV=2  ali   15  17.................................................................................................................................................................................................DDRRRGCVHLREIESRWQGTD--ARELPRGVLEGLRQVAPASGYLTFERFVAGLRTSLLS............................................................................................................................ 74

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.