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Query: 5Y8X Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRRLAFLVVAFCLAVGCFFSPVSKAEGVMSGGDGDKVAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETRETSIINSRERAPEGAKPDMFLDEDGKVIPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSKTAAKDIFLPDGEPLKEGDILVQKDLAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEYHGYDIASMPPPSSGGVFMLQVLKLIDDFHLSQYDPKSFEKYHLLAETMHLSYADRAAYAGDPEFVDVPLRGLLDPDYIKERQKLISLDSMNRDVKEGDPWKYEEGEPNYEIVPQPEDKTIGELast
1 -5.510sp|Q8NHR7|CO043_HUMAN Uncharacterized protein C15orf43 OS=Homo sapiens GN=C15orf43 PE=2 SV=1  ali   10  3......................................................................................................................................................................................................................................QGQRGWFCGSVSQDLRQFWVAEGGTISDPRAADF----------------LFSCDASHPDTLRIYQSLDYIE----DNATVFHAYYLSAVANAKIKNSVALGHFILPPACLQKEIRRKIGS............................................... 103
2 -5.330sp|O00592|PODXL_HUMAN Podocalyxin OS=Homo sapiens GN=PODXL PE=1 SV=2  ali   26  46...........................................LLETVFHHVSQAGLELLTSGDLPTLAS------------QSAGITA..................................................................................................................................................................................................................................................................................................................... 79
3 -5.000sp|Q8TE68|ES8L1_HUMAN Epidermal growth factor receptor kinase substrate 8-like protein 1 OS=Homo sapiens GN=EPS8L1 PE=1 SV=3  ali   22  1............................................................................................................................................................................................................................................................................................PPSEAEYTDVLQAFSLLARLRGNIADPSSPELLHFLFGPLQMIV----NTSGGPEFASSVRRPHLTSDAVALLRDNVTPRENELWTSLGD........................ 90
4 -4.840sp|Q2NL67|PARP6_HUMAN Poly [ADP-ribose] polymerase 6 OS=Homo sapiens GN=PARP6 PE=2 SV=1  ali   13  1..........................................................................................................................................................................................................FLYGVQGSCAADLYRHPQLDADIEAVKEENSVSIREYGTIDDVDIDLHINISFLDEEVSTAWKVLRTEPIVLRLRSIEVFQPSNKEGFGLG-LQLKKILGMF.............................................................................................. 116
5 -4.300sp|Q8TE67|ES8L3_HUMAN Epidermal growth factor receptor kinase substrate 8-like protein 3 OS=Homo sapiens GN=EPS8L3 PE=1 SV=2  ali   15  5.............................................................................................................................................................................................................................................................................................LTQAQYIDCFQSFNLLGRLATWLKETSAPELVHILFKSLNFIL----ARCPEAGLAAQVISPLLTPKAINLLQSCLSPPESNLWMGLGPAWTTSRAD................ 101
6 -4.300tr|Q4VAR0|Q4VAR0_HUMAN CYP11B1 protein OS=Homo sapiens GN=CYP11B1 PE=2 SV=1  ali   8  3..............................................................................................................................................................................................................................................................................................PRRPGNRWLRLLQIWREQGYEDLHLEVHQTFQELGPIFRSRHSASFGWGRSAARAGL....................................................... 60
7 -4.000sp|O75140|DEPD5_HUMAN DEP domain-containing protein 5 OS=Homo sapiens GN=DEPDC5 PE=2 SV=1  ali   18  12...............................................................................................................................................................VDWKSLTTPALPLTTDYFPDRQGLQNDYTEGCYDLLPEADIDRRDEDGVQMTAQQVFE--------EFICQRLMQGY.................................................................................................................................................................. 81
8 -3.930tr|E9PHB0|E9PHB0_HUMAN Uncharacterized protein OS=Homo sapiens GN=AMN1 PE=4 SV=2  ali   17  63...........................................DLETGFHHVAQAGLELRSSSDPSASAS------------QNAGITD..................................................................................................................................................................................................................................................................................................................... 96
9 -3.870sp|Q6VEP2|F138D_HUMAN Protein FAM138D OS=Homo sapiens GN=FAM138D PE=2 SV=1  ali   20  4...........................................TIETQSHYVAQAGLELLASSDPPTLAS------------QSVGIID..................................................................................................................................................................................................................................................................................................................... 37
10 -3.830tr|D6RF31|D6RF31_HUMAN Uncharacterized protein OS=Homo sapiens GN=ANK3 PE=4 SV=1  ali   17  6....................................................................................................................................................................................................................................................................................................TMNEVLDMSDDEGNRCTWYKIPKVQEFTVKSEDAMTGDTDKYLGPQDLKELGDDSLPAEGYMG........................................... 68
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.