current user: public |
|
Query: 5YW3 Entity 1(prereleased), from PDB1018 |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | ADFEVHMLNKGKDGAMVFEPASLKVAPGDTVTFIPKDKGHNVETIKGMIPDGAEAFKSKINENYKVTFTAPGVYGVKCTPHYGMGMVGVVQVGDAPANLEAVKGAKNPKKAQERLDAALAALGN | Last |
1 | -8.370 | sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1 | ali | 8 | 131 | GVYMLKAVIYNEFHGVSAFMNSSSVHEDEVLVFAD-------------------SQVNQKSTVVIHHFPSIPSYNVSFISQTQVGDS-SMTVWYKMQSVS........................ | 230 |
2 | -6.360 | sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2 | ali | 12 | 1 | ......................LPFRRG--IRLLDSGSVENVLQVGFHLSGTVTELATASEPAVAISFDRCKITSVTCGAH----VVALSLYKPDQVKLRLPISETLFQMNRDQLQKFIQYL.. | 110 |
3 | -6.350 | tr|F5H146|F5H146_HUMAN Uncharacterized protein OS=Homo sapiens GN=STXBP2 PE=4 SV=1 | ali | 19 | 26 | ......................................................................LGAVAHTCNPSAVGGQGRRIT................................. | 46 |
4 | -6.240 | sp|P38435|VKGC_HUMAN Vitamin K-dependent gamma-carboxylase OS=Homo sapiens GN=GGCX PE=1 SV=2 | ali | 17 | 45 | GNTSIQLLQGEVTVELVAEQKNQTLREGEKM-QLPAGEYHKVYTTSPS............................................................................ | 91 |
5 | -6.140 | sp|O95382|M3K6_HUMAN Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3 | ali | 16 | 28 | ................VLLPAKLEVRGTDPVSWTFPVASICGVSASKRDERCCFLYALPPAQDVQLCFPSVGHCQWFC.............................................. | 106 |
6 | -5.920 | sp|Q08380|LG3BP_HUMAN Galectin-3-binding protein OS=Homo sapiens GN=LGALS3BP PE=1 SV=1 | ali | 21 | 118 | ........SGGSDRTIAYENKALMLCEGLFVADV-----TDFEGWKAAIPSALDTNSSKSTSSFPCPAGHFNGFRTVIRPFYLTNSSGV................................... | 193 |
7 | -5.880 | sp|P35573|GDE_HUMAN Glycogen debranching enzyme OS=Homo sapiens GN=AGL PE=1 SV=3 | ali | 11 | 3 | HSKQIRILLLNEMEKL--EKTLFRLEQGYELQFRLGPTGKAVTVYTNYPFPGETEREDDSDKYCKLNLQQSGSFQYYFLQGNEKSGGGYIVVDPILRVGADNHVLPLDCVTQTFLAKCLGPFDE | 142 |
8 | -5.200 | sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 | ali | 27 | 19 | ...................PTMVLVLPGNEALFSLETASDYVKD------------------------DKASFYGFKCF............................................. | 54 |
9 | -5.130 | sp|Q9NRJ4|TULP4_HUMAN Tubby-related protein 4 OS=Homo sapiens GN=TULP4 PE=2 SV=2 | ali | 13 | 19 | .......................................................YQTPLGYERITTFDSSGNVEEVCRPRTRMGSSATLRLTATEKKVPQPCSSAT................. | 82 |
10 | -5.120 | sp|Q96GX1|TECT2_HUMAN Tectonic-2 OS=Homo sapiens GN=TCTN2 PE=2 SV=1 | ali | 14 | 25 | .............GDLAFIPPFIRMS-GPAVSASLVGDTEGVTDEAGILPIPTCGVLNNETEDWSVTVIPGAKVLEVCSSNETDSFSESPCILQT............................. | 122 |
FFAS is supported by the NIH grant R01-GM087218-01
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |