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Query: 5YXK Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst SMLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLALast
1 -21.600sp|Q8IZF5|GP113_HUMAN Probable G-protein coupled receptor 113 OS=Homo sapiens GN=GPR113 PE=2 SV=1  ali   9  7NLNSQLQMPGDTLSLTLHLSQEAT----NLSWFLRHPGSPSPILLQPGTQ-----------SVTSSHGQAALSVSNMSHHWAGEYMSCFEAQGFKWNLYEVVRVPLK.... 99
2 -16.900sp|O95866|G6B_HUMAN Protein G6b OS=Homo sapiens GN=G6B PE=1 SV=1  ali   12  2PGASLDGRPGDRVNLSCGGVSH------PIRWVWASKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHED--------ESRTVLHVLG 107
3 -15.500tr|B0UXC6|B0UXC6_HUMAN Chromosome 6 open reading frame 25 OS=Homo sapiens GN=C6orf25 PE=4 SV=1  ali   12  2PGASLDGRPGDRVNLSCGGVSH------PIRWVWASKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHED--------ESRTVLHVLG 107
4 -13.100sp|Q9HBV2|SACA1_HUMAN Sperm acrosome membrane-associated protein 1 OS=Homo sapiens GN=SPACA1 PE=1 SV=1  ali   10  61GWGKPISESLESVRLACIHTSPLN----RFKYMWK----------------------LRQDQQSIILVNDSAILEVRKESHPLAFECDTLDNN----EIVATIKFTVYTSS 142
5 -9.280sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo sapiens GN=VWDE PE=2 SV=4  ali   9  3....LVELIESRLFCRCSFDVPATKNSVGFHIAW----------SRLSSQEVKEELTQ----ETTVQAFSLLELDGINLRLGDRIFCSASV.................... 75
6 -7.360tr|F8VUB1|F8VUB1_HUMAN Uncharacterized protein OS=Homo sapiens GN=PMEL PE=4 SV=1  ali   17  150..................................................................SPACQLVLHQILKGGSGTYCLNVSLADTNSLA---VVSTQLIM.. 189
7 -6.980sp|Q8TEM1|PO210_HUMAN Nuclear pore membrane glycoprotein 210 OS=Homo sapiens GN=NUP210 PE=1 SV=3  ali   18  74..........................................................ISCQSQFKPAVFDFPSQDV--TALGQYFCSITMHRLTDKQRLSMKKTALVVSA 134
8 -6.070sp|Q96JX3|SRAC1_HUMAN Protein SERAC1 OS=Homo sapiens GN=SERAC1 PE=2 SV=1  ali   6  41.......ILGGSLFLTYEVLALKKAVTLDTQVVEREKMKSYIYVHTVSLDKGENHGIAWQARKELHK............................................ 100
9 -5.620sp|O15091|MRRP3_HUMAN Mitochondrial ribonuclease P protein 3 OS=Homo sapiens GN=KIAA0391 PE=1 SV=2  ali   14  1.........................KTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSKWLCLHQKT................... 72
10 -5.590sp|Q96DZ1|ERLEC_HUMAN Endoplasmic reticulum lectin 1 OS=Homo sapiens GN=ERLEC1 PE=1 SV=1  ali   20  36............................................................................MTTAHKEKYKCILPLVTSGD............... 55
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.