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Query: 5Z4O Entity 1(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGLast
1 -5.810sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3  ali   10  6.........VIGFHGGLDPLTKLVHFTQRDYDVLAGRWTSPDYTMWKNVGKEPAPFNLYMFKSNNPLSSELDLKNYVTDVKSWLVMFGFQLSN................................................................................................................... 90
2 -4.730sp|Q309B1|TR16L_HUMAN Tripartite motif-containing protein 16-like protein OS=Homo sapiens GN=TRIM16L PE=2 SV=3  ali   22  21.........PSVYIGLKDKLSGIRKVITESTVHLIQ-LLENYKKKLQEFSKEEE.......................................................................................................................................................... 64
3 -4.730sp|O95361|TRI16_HUMAN Tripartite motif-containing protein 16 OS=Homo sapiens GN=TRIM16 PE=1 SV=3  ali   20  21.........PSVYVGLKDKLSGIRKVITESTVHLIQ-LLENYKKKLQEFSKEEE.......................................................................................................................................................... 64
4 -4.190sp|Q8NAG6|ANKL1_HUMAN Ankyrin repeat and LEM domain-containing protein 1 OS=Homo sapiens GN=ANKLE1 PE=2 SV=2  ali   10  78...........FYVGKGTRARPYVHLW-----EALGHHGRSRKQPHQACPKVRQILDIWASGCGVVSLH-VAVEAYTREACLTNQKQGHCYGVVAGWPPARRRRLGVHLLHRALLVFLAEGERQ.................................................................................... 198
5 -4.020sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2  ali   12  11............................HCDADGLHSLSYHPALNAILAVTSRGTIKVIDGTSGATLQASALSAKPGGQVKCQYISAVDKVDDYAVGCRKDLNGIAQQLLSACLEKVDISSTEGYDLFITQLKDGLKTSHETAANHKVAKWATVTFHLPHHVLKSIASAIVNELKKINQNVAAL........................ 196
6 -4.010sp|Q8N187|AL2S8_HUMAN Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein OS=Homo sapiens GN=ALS2CR8 PE=2 SV=2  ali   19  11.............FGQNDSPTVLPITTREANNSLISQNIPGPLTQTQ-TLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQ...................................................................................................................... 86
7 -4.010sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4  ali   14  41............FVNSSDNVHNTIHLISQVMDNMV--ACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLIFASSLGFTEIEAEKSMSSGGILRQCLRLVCAVA.............................................................................................. 148
8 -4.000tr|F8WAQ6|F8WAQ6_HUMAN Uncharacterized protein OS=Homo sapiens GN=ASCC2 PE=4 SV=1  ali   11  6..LDQLQTHKDPKTGKLRTSPAL--TSLHSSQVTTVTWMKPCLPSFRSSAISSSTVVCKGTG---PIPHPRSLRRGA................................................................................................................................... 77
9 -3.930sp|Q9P2J5|SYLC_HUMAN Leucyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=LARS PE=1 SV=2  ali   11  1..LNVFRIEPGVSV-NPQPSNGHFSTKIEIRQGDNCDSIIRRLMKMNRGIKDLSKVKLMRGPRRVPVLGKEYTEKTPIS---AVFNVDLMSKKIHLTENGIRVDIGDTIIYLVH.............................................................................................. 119
10 -3.910tr|Q32MM9|Q32MM9_HUMAN BBS1 protein OS=Homo sapiens GN=BBS1 PE=2 SV=1  ali   16  1....NVPRKTRLYVDQTEAGTAMHRAFQTRAARAYLQALESSLSPLSTTAREPLKLHAVVQGLGPTFKLTLHLQNTSTTRPVLGLLVCFLYNEALYSLPRAFFKVPL-LVPGLNYPLETFVE...................................................................................... 128
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.