current user: public

If you have questions about the server, please let us know.

Query: 5Z4P Entity 6(prereleased), from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .
# Score Template Links and tools%idFirst MYTFVVRDENSSVYAEVSRLLLATGQWKRLRKDNPRFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADKLCRKASLVKLIKTSPELSESCTWFPESYVIYPTNLKTPVAPAQNGIRHLINNTRTDEREVFLAAYNRRREGREGNVWIAKSSAGAKGEGILISSEASELLDFIDEQGQVHVIQKYLEKPLLLEPGHRKFDIRSWVLVDHLYNIYLYREGVLRTSSEPYNSANFQDKTCHLTNHCIQKEYSKNYGRYEEGNEMFFEEFNQYLMDALNTTLENSILLQIKHIIRSCLMCIEPAISTKHLHYQSFQLFGFDFMVDEELKVWLIEVNGAPACAQKLYAELCQGIVDVAISSVFPLADTGQKTSQPTSIFIKLLast
1 -21.300sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2  ali   97  1MYTFVVRDENSSVYAEVSRLLLATGHWKRLRRDNPRFNLMLGERNRLPFGRLGHEPGLVQLVNYYRGADKLCRKASLVKLIKT....................................................................................................................................................................................................................................................................................................... 83
2 -8.000sp|Q6EMB2|TTLL5_HUMAN Tubulin polyglutamylase TTLL5 OS=Homo sapiens GN=TTLL5 PE=1 SV=3  ali   14  32..RYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPF......................................................................................................................................................................................................................................................................................................................................... 78
3 -7.320sp|Q68DN1|CB016_HUMAN Uncharacterized protein C2orf16 OS=Homo sapiens GN=C2orf16 PE=1 SV=3  ali   12  1................................................................................................................................................................................SQPSVVKNYIQRHTFYHGHKKRMALRIWTRGSTSSIIQQYSGTRVRIKKTNSTFNGISQEVIQ........................................................................................................................................... 63
4 -6.600sp|A5YM72|CRNS1_HUMAN Carnosine synthase 1 OS=Homo sapiens GN=CARNS1 PE=1 SV=3  ali   25  2........................................................................................................................................................................................................................................................................................................................DFLGVDFALGGVLTPVALELNGGLCLEA...................................... 32
5 -5.300sp|A4D0V7|CG058_HUMAN Uncharacterized protein C7orf58 OS=Homo sapiens GN=C7orf58 PE=2 SV=1  ali   21  46LHQHILTQHGYTVVIAEERLNAGLGPGLLEQGDLGSWDLLIAEGTPCISKEVMCQLGLHQKANRLPEIQQLCRKEGLCQIVRRFPEL................................................................................................................................................................................................................................................................................................... 139
6 -5.210tr|B1AP70|B1AP70_HUMAN Tubulin tyrosine ligase-like family, member 11 OS=Homo sapiens GN=TTLL11 PE=4 SV=1  ali   6....................................................................................................................................................VFPKYAKQFNYLRLVDRMANLFIRFLGIKGTMKLRTFIRSCKLSSSSLSMAAVDILYI-DSGMCLQAFVEAFFFLAQRKFKMLPLHEQVASLIDLCEYHLSLLDEKR........................................................................................................................... 130
7 -5.140sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6 PE=1 SV=2  ali   1........................................................................................................................................................................................YVADLVLANQQIMSQILSALGLCNSSAMAMIIGASGLHLTKHE-DAISVGDGLFTILTTLSKKASTV---------HMMLQPILTYMACGYMGRQGSLATCQLSEPLLWFILRV---LDTSDALKAFHDMGGVQLICNNMVTSTRAIVNTARSMVSTI.................................... 151
8 -5.110tr|E7EX20|E7EX20_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTLL4 PE=4 SV=1  ali   17  31..RKLLRWKMSTVTPNIVKQTIGRSHFKISK-RNDDWLGCWGHHMKSPSFRSIRE................................................................................................................................................................................................................................................................................................................................... 82
9 -5.000tr|F8W6M1|F8W6M1_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTLL11 PE=4 SV=1  ali   6....................................................................................................................................................VFPKYAKQFNYLRLVDRMANLFIRFLGIKGTMKLRTFIRSCKLSSSSLSMAAVDILYI-DSGMCLQAFVEAFFFLAQRKFKMLPLHEQVASLIDLCEYHLSLLDEKR........................................................................................................................... 130
10 -4.810sp|A2VCL2|CC162_HUMAN Coiled-coil domain-containing protein 162 OS=Homo sapiens GN=CCDC162P PE=2 SV=3  ali   13  53...................................................................................................................................................LRGDWGGTEGIGSELQELQNMIDSLQSPQDPIRVAQALLRREVIF----LQFDAAVRHLIRRTFNVPAYQSVTDGMCHGLPALSNSLRKSIFASQLSLPQPLDPRSLQAFELFPW-----RAFLEDGGPFPVMSNSPDTLEYNMQLCLCG----LSDRDRKVAHGELVGVQLLLEDVLS.................................................... 223

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 0   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.