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Query: 5lzs_l mol:protein length:51 Uncharacterized protein, from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50
# Score Template Links and tools%idFirst MSSHKTFRIKRFLAKKQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGLLast
1 -4.760sp|O43623|SNAI2_HUMAN Zinc finger protein SNAI2 OS=Homo sapiens GN=SNAI2 PE=1 SV=1  ali   25  3.........RSFLVKKHFNASKKPNYSELDTHTVII............... 29
2 -4.660sp|Q6P4F1|FUT10_HUMAN Alpha-(1,3)-fucosyltransferase 10 OS=Homo sapiens GN=FUT10 PE=2 SV=2  ali   20  2..QEKGLPPKRWEAEDTHLSCPEPTVFAFSPLRTPPLSSLREMWISS.... 46
3 -4.570sp|Q5QGT7|RTP2_HUMAN Receptor-transporting protein 2 OS=Homo sapiens GN=RTP2 PE=2 SV=1  ali   13  11.........KKVFYEKMEVAKPADSW-ELIIDPNLKPSELAPGWKQ..... 46
4 -4.550sp|Q24JQ0|CR045_HUMAN Transmembrane protein C18orf45 OS=Homo sapiens GN=C18orf45 PE=2 SV=1  ali   9  1..................SRLAIPVFLTLHNVAEVIICGYQKCFQKEKTSP 33
5 -4.520sp|Q9NWK9|BCD1_HUMAN Box C/D snoRNA protein 1 OS=Homo sapiens GN=ZNHIT6 PE=1 SV=1  ali   13  1.........KNRARRQGINLKLLPNGFTKRKENSTFFDKKKQCWH...... 38
6 -4.310sp|Q16739|CEGT_HUMAN Ceramide glucosyltransferase OS=Homo sapiens GN=UGCG PE=1 SV=1  ali   18  22............VAWFIRESMTIYIFLSALWDPTIS-------WRTGRYRL 53
7 -4.280sp|Q9Y3R5|DOP2_HUMAN Protein dopey-2 OS=Homo sapiens GN=DOPEY2 PE=1 SV=5  ali   7  38.EEETEQLCATLFQLPGAGDSSFPSWLKS...................... 65
8 -4.220sp|Q96CP6|GRM1A_HUMAN GRAM domain-containing protein 1A OS=Homo sapiens GN=GRAMD1A PE=1 SV=2  ali   17  32........................EWAEILALQKQFHSVEVHKWRQI.... 54
9 -4.210sp|Q16602|CALRL_HUMAN Calcitonin gene-related peptide type 1 receptor OS=Homo sapiens GN=CALCRL PE=1 SV=2  ali   40  7........................................RRNWNQYKIQ. 16
10 -4.110sp|Q658N2|WSCD1_HUMAN WSC domain-containing protein 1 OS=Homo sapiens GN=WSCD1 PE=1 SV=1  ali   27  52............LQSPLTRPRPGPRWLRSRNSE---LRQLRRRW....... 80
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;