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Query: 5x41_Q mol:protein length:256 Uncharacterized protein CbiQ, from PDB1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGSSGSMSIASIDRVAAQGHWRSRPLAEKSLIGLGFLALAVTVPPFPGAVLVTVAILAFTFLGARVPLRFWASVAVLPLGFLTTGAAVLLIQIGPEGIGLAPDGPAKAAALVMRATAATCCLLFLATTTPAADLLSGLRRWRVPAELIEIALLTYRFVFILAEEAAAMTTAQRARLGHATRRRWLRSTAQVIAALLPRALTRARRLETGLGARNWQGEMRVLSTRPPASARVLGLILTLQAAILAAGVLLLast
1 -5.150sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3  ali   16  11......................................................................................................................................................LLLSIRY--TLDEEKARVLDQARQRALGTAWAKEQQKARDGREGSRLWTEGEKQQLLSTGRVQGYEGY................................ 81
2 -4.830sp|Q8N5C1|FA26E_HUMAN Protein FAM26E OS=Homo sapiens GN=FAM26E PE=2 SV=1  ali   51..........................................................................................................EELKLSLQAQSQILGWCLICSASFFSLLTTCYARCRSKVSYLQL-----SFWKTYAQKEKEQLENTFLDYANKLSERNLKCFNKRPDPFPMPTFAAWEAASELHSFHQSQQHYSTLH........................... 164
3 -4.540sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1  ali   11  21..................................................VVLLSLAMVMAGSGNLKVLQLCRFLHMKTFHLAHHMALGLLFLGGGRYSLSTSNS---------SIAALLCALYPHFPAHSTDNRYHLQALR----HLYVLAAEPRLLVPVDVDTNTPCYA-LLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVK......................................... 172
4 -4.380sp|Q53T94|TAF1B_HUMAN TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Homo sapiens GN=TAF1B PE=1 SV=1  ali   11  3..................................................TLAFCYLSLLWQREAITLSDLLRFVE--IPYINAFQHF--MKLYGRDRGIFGIESWPDYEDIYKKTVEVGTFLDLPRFPDITECMKYLMEVNLPD---EMHSLTCHVVKMTGMGEVDFLTFDPIAKMAKTVKYDVQAVAIIVVVLLLFLLDDSFEWSLSNLAE..................................... 174
5 -4.350sp|Q5T6L9|CF070_HUMAN Transmembrane protein C6orf70 OS=Homo sapiens GN=C6orf70 PE=2 SV=1  ali   14  48.........................................................................................................................................VPTLFCPRIVLEVLVVLRSISEQCRRVSSQVTVASELRHRQWVERT-------------LRSRQRQNRMWSSIR....................................... 110
6 -4.320sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapiens GN=RTL1 PE=2 SV=2  ali   25  1....................................................................................................................................EIRHYLFRVPQPDSLDSLIVLILQIEEKLAERRAMLRLPPEAR........................................................................... 43
7 -4.130tr|E7ERS4|E7ERS4_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   17  1.......................................................................................................................ASISVIIFITPKEE-----------PALQEGLHLQEDGLPATAEDAATCLTVLSSQPASCRASCCLRADGPGMLAHVSTVLEMGAQYWEMGAQYWEMGA................................ 88
8 -4.110sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens GN=ABCA4 PE=1 SV=3  ali   11  119..............................................................................................................................RTQRSTEILQDLTDRNISDFLVKTYP-------LIRSSLKSKFWVNEQRYGGISIGGKLPVVPITGEALLSDLGRIMNVSGGPITREASKE................................. 206
9 -4.090sp|Q96I76|GPTC3_HUMAN G patch domain-containing protein 3 OS=Homo sapiens GN=GPATCH3 PE=2 SV=1  ali   26  19..............................................................................................................................VGTPLRVFLELIRACRLPPRIITQLQLQFP.............................................................................................. 48
10 -4.040sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2  ali   21  15..............................................................................................................LIVKCTADILLLDTLLGT-----LVKELQNKYTPGRREEAIAVTMRFLRSVARVFVILSVEMASSKKKNNFIPQIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIAR.............................. 120

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.