current user: public

If you have questions about the server, please let us know.

Query: 1bin_A mol:protein length:143 LEGHEMOGLOBIN A, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst VAFTEKQDALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSFLANGVDPTNPKLTGHAEKLFALVRDSAGQLKASGTVVADAALGSVHAQKAVTDPQFVVVKEALLKTIKAAVGDKWSDELSRAWEVAYDELAAAIKKALast
1 -74.6001bin_A mol:protein length:143 LEGHEMOGLOBIN A  ali model  100  1VAFTEKQDALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSFLANGVDPTNPKLTGHAEKLFALVRDSAGQLKASGTVVADAALGSVHAQKAVTDPQFVVVKEALLKTIKAAVGDKWSDELSRAWEVAYDELAAAIKKA 143
2 -66.0001gdi_A mol:protein length:153 LEGHEMOGLOBIN (CARBONMONOXY)  ali model follow..  57  2.ALTESQAALVKSSWEEFNANIPKHTHRFFILVLEIAPAAKDLFSFLKGEVPQNNPELQAHAGKVFKLVYEAAIQLEVTGVVATLKNLGSVHVSKGVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIKKE 148
3 -64.0003zhw_A mol:protein length:160 NON-SYMBIOTIC HEMOGLOBIN 1  ali model follow..  42  7IVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDIPAEQNPKLKPHAMSVFVMCCESAVQLRKTGKVTTLKRLGASHSKYGVVDEHFEVAKYALLETIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAE 155
4 -62.5001oj6_A mol:protein length:151 NEUROGLOBIN  ali model follow..  17  1..MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNGREDSLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKSLGPAFTPATRAAWSQLYGAVVQAMSRG 147
5 -62.2004b4y_A mol:protein length:154 NEUROGLOBIN  ali model follow..  19  7MQVSEEQQSLIMEDVQVLLPNYDDFVEDVLQQFMEENPETFQIFPWADAKEMRSHPRFKSHAKSIGKVISDCLVDLNGVKKHPKLSSLGAMHTKKKVPTELFGKLGGCILTQVVKRVSEAWSEEKKEAWLKAYGIITVMVTE. 154
6 -61.9002vry_A mol:protein length:154 NEUROGLOBIN  ali model follow..  16  3.HMERPESELIRQSWRVVSRSPLEHGTVLFARLFALEPSLLPLFQYNGREDSLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEYLTSLGRKHRAVGVRLSSFSTVGESLLYMLEKSLGPDFTPATRTAWSRLYGAVVQAMSRG 150
7 -61.9001vhb_A mol:protein length:146 HEMOGLOBIN  ali model follow..  20  2..LDQQTINIIKATVPVLKEHGVTITTTFYKNLFAKHPEVRPLFD-------MGRQESLEQPKALAMTVLAAAQNIENLPAIPAVKKIAVKHCQAGVAAAHYPIVGQELLGAIKEVLGDAATDDILDAWGKAYGVIADVFIQV 136
8 -61.9004mpm_A mol:protein length:151 Neuroglobin  ali model follow..  17  1..MERPEPELIRQSWRAVSRSPLEHGTVLFARLFALEPDLLPLFQYNCREDCLSSPEFLDHIRKVMLVIDAAVTNVEDLSSLEYLASLGRKHRAVGVKLSSFSTVGESLLYMLEKCLGPAFTPATRAAWSQLYGAVVQAMSRG 147
9 -61.7003qqq_A mol:protein length:168 Non-symbiotic hemoglobin  ali model follow..  42  8KVFTEEQEALVVKSWAVMKKNSAELGLKFFLKIFEIAPSAKNLFSYLKDIPLEQNPKLKPHAMTVFVMTCESAVQLRKAGKVSNLKRLGAIHFKNGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGEAYDQLVAAIKSE 156
10 -61.7003qqr_A mol:protein length:162 Non-legume hemoglobin  ali model follow..  41  8KVFTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDVPLEQNPKLKPHATTVFVMTCESAVQLRKAGKVSDLKRIGAIHFKTGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGVAYDQLVAAIKFE 156
11 -61.7003wfw_A mol:protein length:138 Hemoglobin-like flavoprotein fused to Roadblock/LC7 domain  ali model follow..  19  1..MTREEIKMIQKSWLRVIDKMDEAGLLFYRRLFDVEPKVRPLF----------KIDIEKQGRKLMDVLNWIVLNLQDIDAADAARELARRHVKYGVKAEHYPVVGHTLIWTLRKMIGSEWTKQLEQLWTQAYEALAQVMIE. 131
12 -61.3003s1i_A mol:protein length:139 Hemoglobin-like flavoprotein  ali model follow..  21  2..IDQKEKELIKESWKRIEPNKNEIGLLFYANLFKEEPTVSVLF----------QNPISSQSRKLMQVLGILVQGIDNLEGLPTLQDLGRRHKQYGVVDSHYPLVGDCLLKSIQEYLGQGFTEEAKAAWTKVYGIAAQVMTA. 132
13 -61.1001d8u_A mol:protein length:166 NON-SYMBIOTIC HEMOGLOBIN  ali model follow..  42  12VSFSEEQEALVLKSWAILKKDSANIALRFFLKIFEVAPSASQMFSFLRNVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTTLKRLGATHLKYGVGDAHFEVVKFALLDTIKEEVADMWSPAMKSAWSEAYDHLVAAIKQE 161
14 -60.8002oif_A mol:protein length:162 Non-legume hemoglobin  ali model follow..  39  8VVFSEEKEALVLKSWAIMKKDSANLGLRFFLKIFEIAPSARQMFPFLRDVPLETNPKLKTHAVSVFVMTCEAAAQLRKAGKITTLKRLGGTHLKYGVADGHFEVTRFALLETIKEALADMWGPEMRNAWGEAYDQLVAAIKQE 157
15 -60.2002r50_A mol:protein length:165 Non-symbiotic hemoglobin  ali model follow..  40  11VVFGEEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAKQMFSFLRDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTTLKRLGATHLRYGVADGHFEVTGFALLETIKEALADMWSLEMKKAWAEAYSQLVAAIKRE 160
16 -59.8001hlm_A mol:protein length:159 HEMOGLOBIN (CYANO MET)  ali model follow..  16  11GDLTPAEKDLIRSTWDQLMTHRTGFVADVFIRIFHNDPTAQRKFPQMAGAELRTSRQMHAHAIRVSALMTTYIDEMDTEVLPELLATLTRTHDKNHVGKKNYDLFGKVLMEAIKAELGVGFTKQVHDAWAKTFAIVQGVLITK 156
17 -59.8001jf4_A mol:protein length:147 monomer hemoglobin component IV  ali model follow..  18  1.GLSAAQRQVVASTWKDIADNGAGVGKECFTKFLSAHHDMAAVFGFSGA----SDPGVADLGAKVLAQIGVAVSHLGDEGKMAEMKAVGVRHKGYGIKAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISG 144
18 -59.7001hlb_A mol:protein length:158 HEMOGLOBIN (DEOXY)  ali model follow..  16  11GDLTLAQKKIVRKTWHQLMRNKTSFVTDVFIRIFAYDPSAQNKFPQMAGSQLRSSRQMQAHAIRVSSIMSEYVEELDSDILPELLATLARTHDLNKVGADHYNLFAKVLMEALQAELGSDFNEKTRDAWAKAFSVVQAVLLVK 156
19 -59.7001jf3_A mol:protein length:147 monomer hemoglobin component III  ali model follow..  17  1.GLSAAQRQVVASTWKDIADNGAGVGKECLSKFISAHPEMAAVFGFSGA----SDPGVAELGAKVLAQIGVAVSHLGDEGKMAEMKAVGVRHKGYGIKAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYGDISGALISG 144
20 -59.5004hrr_B mol:protein length:152 Hemoglobin B chain  ali model follow..  19  11VVSNADQKDLLRMSWGVLSVDMEGTGLMLMANLFKTSPSAKGKFARLGDSAGKDNSKLRGHSITLMYALQNFVDALDDVERLCVVEKFAVNHINRQISADEFGEIVGPLRQTLKARMGNYFDEDTVAAWASLVAVVQAAL... 152
21 -59.3002wy4_A mol:protein length:140 SINGLE DOMAIN HAEMOGLOBIN  ali model follow..  18  1..MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMFNDYPEVKPMFN-------MEKQISGEQPKALAMAILMAAKNIENLENMSFVDKVAITHVNLGVKEEHYPIVGACLLKAIKNLLN--PDEATLKAWEVAYGKIAKFYIDI 133
22 -59.1001hbg_A mol:protein length:147 HEMOGLOBIN (CARBONMONOXY)  ali model follow..  16  1.GLSAAQRQVIAATWKDIAGNGAGVGKKCLIKFLSAHPQMAAVFGFSGA----SDPGVAALGAKVLAQIGVAVSHLGDEGKMAQMKAVGVRHKGYGIKAQYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYADISGALISG 144
23 -58.9004hrr_A mol:protein length:150 Globin-2 A chain  ali model follow..  22  9VCGSEAIKANLRRSWGVLSADIEATGLMLMSNLFTLRPDTKTYFTRLGDQKGKANSKLRGHAITLTYALNNFVDSLDDPSRLCVVEKFAVNHINRKISGDAFGAIVEPMKETLKARMGNYYSDDVAGAWAALVGVVQAAL... 150
24 -57.4001spg_A mol:protein length:144 HEMOGLOBIN  ali model follow..  15  1XSLSATDKARVKALWDKIEGKSAELGAEALGRMLVSFPQTKIYFSEWGQDLGPQTPQVRNHGAVIMAAVGKAVKSIDNLVGG--LSQLSELHAKLRVDPANFKILAHNIILVISMYFPGDFTPEVHLSVDKFLACLALALSEK 142
25 -57.1002olp_A mol:protein length:152 Hemoglobin II  ali model follow..  16  3.TLTNPQKAAIRSSWSKFMDNGVSNGQGFYMDLFKAHPETLTPFKSLTLAQLQDNPKMKAQSLVFCNGMSSFVDHLDDNDMLVLIQKMAKLHNNRGIRASDLRTAYDILIHYMED--HNHMVGGAKDAWEVFVGFICKTLGDY 147
26 -57.0001cg5_B mol:protein length:141 PROTEIN (HEMOGLOBIN)  ali model follow..  15  1VKLSEDQEHYIKGVWKDVDHK--QITAKALERVFVVYPWTTRLFSKLQGLFSANDIGVQQHADKVQRALGEAIDDLKKVE--INFQNLSGKHQEIGVDTQNFKLLGQTFMVELALHYKKTFRPKEHAAAYKFFRLVAEALSSN 139
27 -56.6003wtg_A mol:protein length:142 Hemoglobin subunit alpha-A  ali model follow..  12  1MVLSAADKTNTKSVFAKIGPHAEEYGAETLERLFTTYPQTKTYFPHF--DLHHGSAQVKAHGKKVAAALVEAANHIDDISTA--LSKLSDLHQKLRVDPVNFKLLGQCFLVVVAIHHPSLLTPEVHASLDKFLCAVANVLTAK 140
28 -56.5003d1a_A mol:protein length:142 Hemoglobin subunit alpha-1/2  ali model follow..  14  1MVLSAADKSNVKAAWGKVGGNAGAYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGEKVAAALTKAVGHLDDLPTLSDLSDLHAHK--LRVDPVNFKLLSHSLLVTLACHLPNDFTPAVHASLDKFLANVSTVLTSK 140
29 -56.4003dhr_A mol:protein length:142 Hemoglobin subunit alpha-A  ali model follow..  11  1MVLSANDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHF--DLSHGSAQIKGHGKKVAEALVEAANHIDDIA--GALSKLSDLHQKLRVDPVNFKLLGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAK 140
30 -55.9001o1o_A mol:protein length:141 Hemoglobin Alpha chain  ali model follow..  14  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKLADALTNAVAHVDDMPNA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
31 -55.9002qmb_A mol:protein length:142 Hemoglobin subunit alpha-A  ali model follow..  12  1MVLSAADKNNVKGIFTKIAGHAEEYGAETLERMFITYPPTKTYFPHF--DLSHGSAQIKGHGKKVVAALIEAANHIDDIA--GTLSKLSDLHAKLRVDPVNFKLLGQCFLVVVAIHHPAALTPEVHASLDKFLCAVGTVLTAK 140
32 -55.9001jeb_A mol:protein length:142 HEMOGLOBIN ZETA CHAIN  ali model follow..  16  1XSLTKTERTIIVSMWAKISTQADTIGTETLERLFLSHPQTKTYFPHFDL--HPGSAQLRAHGSKVVAAVGDAVKSIDDIGGASKLSELHAYI--LRVDPVNFKLLSHCLLVTLAARFPADFTAEAHAAWDKFLSVVSSVLTEK 140
33 -55.8001xz7_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  12  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA-LSALSDLHAHKLAVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
34 -55.7001mba_A mol:protein length:147 MYOGLOBIN  ali model follow..  16  1XSLSAAEADLAGKSWAPVFANKNANGLDFLVALFEKFPDSANFFADFKGADIKASPKLRDVSSRIFTRLNEFVNNAANAGKMAMLSQFAKEHVGFGVGSAQFENVRSMFPGFVASVAA--PPAGADAAWTKLFGLIIDALKAA 145
35 -55.6001s0h_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  12  2..LSAADKTNVKAAWSKVGGNAGEFGAEALERMFLGFPTTKTYFPHF--DLSHGSAQVKAHGKKVGDALTLAVGHLDDLPGA--LSNLSDLHAKLRVDPVNFKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVLTSK 139
36 -55.6002b7h_B mol:protein length:146 hemoglobin beta chain  ali model follow..  14  1VHLTAEEKSLVSGLWAKVNVD--EVGGEALGRLLIVYPWTQRFFDSFGDDSVMSNAKVKAHGKKVLNSFSDGLKNLDNLKGT-FAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHK 144
37 -55.6003a0g_A mol:protein length:141 Hemoglobin subunit alpha  ali model follow..  14  2..LSAADKNNVKTTWDKIGGHAAEYVAEGLTRMFTSFPTTKTYFHHI--DVSPGSGDIKAHGKKVADALTTAVGHLDDLPTASTLSDVHAHK--LRVDPVNFKFLNHCLLVTLAAHLGADFTPSIHASLDKFFASVSTVLTSK 139
38 -55.6001bab_A mol:protein length:143 HEMOGLOBIN THIONVILLE (DEOXY) (ALPHA CHAIN)  ali model follow..  12  2MELSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHF--DLSHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 141
39 -55.5003ia3_B mol:protein length:145 Hemoglobin subunit alpha  ali model follow..  13  4MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 143
40 -55.4003pt7_B mol:protein length:152 Hemoglobin III  ali model follow..  14  2SGLTGPQKAALKSSWSRFMNNAVTNGTNFYMDLFKAYPDTLTPFKSLSFNQMTNHPTMKAQSLVFCNGMSSFVDNLDDHEVLVLLQKMAKLHFNRGIRIKELRDGYGVLLRYLEDHCH--VEGSTKNAWEDFIAYICRVQGDF 147
41 -55.4002dhb_A mol:protein length:141 HEMOGLOBIN (DEOXY) (ALPHA CHAIN)  ali model follow..  13  2..LSAADKTNVKAAWSKVGGHAGEYGAEALERMFLGFPTTKTYFPHF--DLSHGSAQVKAHGKKVADGLTLAVGHLDDLP--GALSDLSNLHAKLRVDPVNFKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVLTSK 139
42 -55.4001xy0_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  13  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTGTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
43 -55.4001dm1_A mol:protein length:146 MYOGLOBIN  ali model follow..  17  1.SLSAAEADLAGKSWAPVFANKNANGDAFLVALFEKFPDSANFFADFKGADIKASPKLRDHSSTIFTRLNEFVNNAANAGKMAMLSQFAKEHVGFGVGSAQFENVRSMFPGFVASVAA--PPAGADAAWTKLFGLIIDALKAA 144
44 -55.3002r1h_A mol:protein length:143 Hemoglobin subunit alpha-4  ali model follow..  17  1XSLSAKDKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASVA-PGSAPVKKHGITIMNQIDDCVGHMDDLF--GFLTKLSELHAKLRVDPTNFKILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEK 141
45 -55.3002qmb_B mol:protein length:146 Hemoglobin beta chain  ali model follow..  15  1VHWSAEEKQLITGLWGKV--NVADCGAEALARLLIVYPWTQRFFASFGNTAILGNPMVRAHGKKVLTSFGDAVKNLDNIKNT-FSQLSELHCDKLHVDPENFRLLGDILIIVLAAHFSKDFTPECQAAWQKLVRVVAHALARK 144
46 -55.2003fh9_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  13  2..LSSTDKSNVKAAWDKVGGNVGEYGAEALERMFLSFPTTKTYFPHF--DLAHGSSQVKAHGKKVGDALTNAVGHIDDLPGA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLASHLPSDFTPAVHASLDKFLASVSTVLTSK 139
47 -55.2001hbr_A mol:protein length:141 PROTEIN (HEMOGLOBIN D)  ali model follow..  13  2..LTAEDKKLIQQAWEKAASHQEEFGAEALTRMFTTYPQTKTYFPHFDL--SPGSDQVRGHGKKVLGALGNAVKNVDNLSQAAELSNLHAYN--LRVDPVNFKLLSQCIQVVLAVHMGKDYTPEVHAAFDKFLSAVSAVLAEK 139
48 -55.1002zfb_B mol:protein length:146 Hemoglobin subunit beta  ali model follow..  13  1VHWSAEEKQLITGLWGKV--NVAECGAEALARLLIVYPWTQRFFTSFGNSAVLGNPNVRAHGKKVLTSFGEAVKNLDNIKNT-FAQLSELHCDKLHVDPENFRLLGDILIIVLAGHFGKDFTPDCQAAWQKLVRAVAHALARK 144
49 -55.1003a59_B mol:protein length:146 Hemoglobin subunit beta  ali model follow..  16  1VQWSAEEKQLISGLWGKV--NVADCGAEALARLLIVYPWTQRFFASFGNTAILGNPMVRAHGKKVLTSFGDAVKNLDNIKNT-FAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFTKEFTPECQAAWQKLVRVVAHALARK 144
50 -55.1001y09_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  11  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA-LSALSDLHAHKLRVDPVAFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
51 -55.1002bk9_A mol:protein length:153 CG9734-PA  ali model follow..  17  1..MNSDEVQLIKKTWEIPVATPTDSGAAILTQFFNRFPSNLEKFPFRDLEELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEIWTKIAVSHIPRTVSKESYNQLKGVILDVLTA--ASSLDESQAATWAKLVDHVYAIIFKA 145
52 -55.1001v75_A mol:protein length:141 Hemoglobin D alpha chain  ali model follow..  13  2..LTEDDKQLIQHVWEKVLEHQEDFGAEALERMFIVYPSTKTYFPHF--DLHHDSEQIRHHGKKVVGALGDAVKHIDNLSAT--LSELSNLHAYLRVDPVNFKLLSHCFQVVLGAHLGREYTPQVQVAYDKFLAAVSAVLAEK 139
53 -55.0001iwh_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  11  2..LSAADKTNVKAAWSKVGGHAGEYGAEALERMFLGFPTTKTYFPHFDL--SHGSAQVKAHGKKVGDALTLAVGHLDDLPGA--LSNLSDLHHKLRVDPVNFKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVLTSK 139
54 -55.0001hds_A mol:protein length:141 HEMOGLOBIN S (DEOXY) (ALPHA CHAIN)  ali model follow..  13  2..LSAANKSNVKAAWGKVGGNAPAYGAQALQRMFLSFPTTKTYFPHFDL--SHGSAQQKAHGQKVANALTKAQGHLNDLP--GTLSNLSNLHAKLRVNPVNFKLLSHSLLVTLASHLPTNFTPAVHANLNKFLANDSTVLTSK 139
55 -54.9001fsx_A mol:protein length:141 HEMOGLOBIN ALPHA CHAIN  ali model follow..  12  2..LSAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGAKVAAALTKAVEHLDDLPGA--LSELSDLHHKLRVDPVNFKLLSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSK 139
56 -54.9001y0a_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  13  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLHHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
57 -54.8004h2l_A mol:protein length:141 Alpha-globin  ali model follow..  15  2..LSADDKANIKAAWGKIGGHGAEYGAEALERMFCSFPTTKTYFPHF--DVSHGSAQVKAHGGKVADALATAAGHLDDLPAA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLAAHLPSDFTPAVHASLDKFLASVSTVLTSK 139
58 -54.8002rao_A mol:protein length:141 Hemoglobin subunit alpha-1/2  ali model follow..  12  2..LSPADKTNIKTAWEKIGSHGGEYGAEAVERMFLGFPTTKTYFPHFDF--THGSEQIKAHGKKVSEALTKAVGHLDDLPGA--LSTLSDLHAHLRVDPVNFKLLSHCLLVTLANHHPSEFTPAVHASLDKFLANVSTVLTSK 139
59 -54.8001fhj_A mol:protein length:141 HEMOGLOBIN (ALPHA CHAIN)  ali model follow..  11  2..LSPADKTNIKSTWDKIGGHAGDYGGEALDRTFQSFPTTKTYFPHF--DLSPGSAQVKAHGKKVADALTTAVAHLDDLPGA--LSALSDHAYKLRVDPVNFKLLSHCLLVTLACHHPTEFTPAVHASLDKFFTAVSTVLTSK 139
60 -54.8001g0b_A mol:protein length:141 HEMOGLOBIN ALPHA CHAIN  ali model follow..  13  2..LSAADKTNVKAAWSKVGGHAGEYGAEALERMFLGFPTTKTYFPHF--DLSHGSAQVKAHGKKVGDALTLAVGHLDDLP--GALSDLSNLHAKLRVDPVNFKLLSHCLLSTLAVHLPNDFTPAVHASLDKFLSSVSTVLTSK 139
61 -54.8001xye_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  13  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTAFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
62 -54.8003a59_A mol:protein length:141 Hemoglobin subunit alpha-A  ali model follow..  10  2..LSGTDKTNVKGIFSKISSHAEEYGAETLERMFITYPQTKTYFPHF--DLHHGSAQIKAHGKKVANALIEAVNHIDDISGASKLSDLHAQK--LRVDPVNFKLLGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGAVLTAK 139
63 -54.8002r80_B mol:protein length:146 Hemoglobin subunit beta  ali model follow..  17  1VHWSAEEKQLITSIWGKV--NVADCGAEALARLLIVYPWTQRFFSSFGNTAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGT-FAQLSELHCDKLHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARK 144
64 -54.8003d4x_A mol:protein length:141 Hemoglobin subunit alpha  ali model follow..  12  2..LSAADKSNVKACWGKIGSHAGEYGAEALERTFCSFPTTKTYFPHFDL--SHGSAQVKAHGQKVADALTQAVAHMDDLPTA--MSALSDLHAKLRVDPVNFKFLSHCLLVTLACHHPAEFTPAVHASLDKFFSAVSTVLTSK 139
65 -54.7003cy5_A mol:protein length:141 Hemoglobin subunit alpha-2  ali model follow..  13  2..LSAADKSNIQAAWGKVGGHAADYGAEALERMFLSFPTTKTYFPHF--DLSHGSAQVKGHGAKVANALTKAVGHLDDLP--GALSELSDLHAKLRVDPVNFKLLSHSLLVTLASHLPNDFTPAVHASLDKFLASVSTVLTSK 139
66 -54.7003at5_B mol:protein length:146 Beta-globin  ali model follow..  15  2.DFTQEERQFIVNLWGRV--DVEQIGAEALARLLIVYPWTQRFFSSFGNSAILHNAKVHAHGKKVLTSFGEAVKNLDQIKQT-FAQLSELHSDKLHVDPENFKLLGNILIIVLAAHFGKDFTPASQAAWQKLVSAVAHALALR 144
67 -54.7003vre_A mol:protein length:141 Hemoglobin subunit alpha  ali model follow..  14  2..LSDNDKTNVKATWSKVGDHASDYVAEALERMFFSFPTTKTYFPHFDL--SHGSGQVKGHGKKVGEALTQAVGHLDDLPSA--LSALSDLHAKLRVDPVNFKLLSHCLLVTLSSHQPTEFTPEVHASLDKFLSNVSTVLTSK 139
68 -54.7001gli_A mol:protein length:141 DEOXYHEMOGLOBIN  ali model follow..  13  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPWTKTYFPHF--DLSHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDLHHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
69 -54.6004yu3_A mol:protein length:141 hemoglobin  ali model follow..  12  2..LSPADKTNIKASWEKIGSHGGEYGAEALERTFLCFPTTKTYFPHFDL--SHGSAQVKAHGKKVADALTNAVGHLDDLPGA--LSALSDLAYKLRVDPVNFKLLSHCLLVTLASHHPAEFTPAVHASLDKFLSSVSTVLTSK 139
70 -54.5003wr1_B mol:protein length:146 Hemoglobin subunit beta  ali model follow..  15  1VHWTAEEKQLITGLWGKV--NVAECGAEALARLLIVYPWTQRFFASFGNTAITGNPMVRAHGKKVLTSFGEAVKNLDNIKAT-FAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAKDFTPECQAAWQKLVGAVAHALARK 144
71 -54.5005eui_A mol:protein length:141 HBA protein  ali model follow..  11  2..LSPADKANVKAAWGKVGGHAGEYGAEALDRMFLSFPTTKTYFPHF--DMSHGSAQVKAHGKKVADALTQAVDHLDDLPGA--LSALSDHAHKLRVDPVNFKLLAHCLLVTLANHHPNEFTPAVHASLDKFLASVSTVLTSK 139
72 -54.5003bj1_A mol:protein length:142 hemoglobin alpha  ali model follow..  14  1.SLSSKDKDAVKALWGKIADKAEEIGADALGRMLAVYPQTKTYFSHWKDLS-PGSAPVNKHGKTIMGGLVDAVASIDDLN--AGLLALSELHATLRVDPANFKILSHCILVQLAVKFPKDFTPEVHLSYDKFFSAVARALAEK 140
73 -54.5003at5_A mol:protein length:141 AlphaA-globin  ali model follow..  10  2..LSPGDKANVKTVWSKVSGHVEDYGAETLERLFRVYPSTKTYFPHF--DLHHDSAQIRTHGKKVLTAIGEAVSHIDDIASA--LSKLSDLHATLRVDPVNFKLLSHSFLVVLAVHAPSLLTPEVHVSLDKFLVAVSNVLTSK 139
74 -54.4001xzv_A mol:protein length:141 Hemoglobin alpha chain  ali model follow..  12  2..LSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDL--SHGSAQVKGHGKKVADALTNAVAHVDDMPNA--LSALSDHAHKLRVDAVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK 139
75 -54.4001out_A mol:protein length:143 HEMOGLOBIN I  ali model follow..  17  1XSLTAKDKSVVKAFWGKISGKADVVGAEALGRMLTAYPQTKTYFSHWADLS-PGSGPVKKHGGIIMGAIGKAVGLMDDLVGG--MSALSDLHAKLRVDPGNFKILSHNILVTLAIHFPSDFTPEVHIAVDKFLAAVSAALADK 141

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.