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Query: 1ggp_A mol:protein length:234 PROTEIN (LECTIN 1 A CHAIN), from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst STDASYNADIKEERDAAEGPMAHGIPALNAGALDEARAYATVDSANTDEEVSVAVDVTNLAVVAYRAGSNSYFHAAAPGSSLSHLFSRSSQHTLGFDNTYGDMAQAAGSNRKAIPLGAAALESGIASLNSKNPLARTLMVIIQMLVEAARFRYIQNNVDVSIETQSAFAADAAMISLENNWANLSALVQGSSGGQGTFASSATLQNAEDEPIIVDAVYHPTVAAVLALMLRKACLast
1 -92.1001ggp_A mol:protein length:234 PROTEIN (LECTIN 1 A CHAIN)  ali model  100  1STDASYNADIKEERDAAEGPMAHGIPALNAGALDEARAYATVDSANTDEEVSVAVDVTNLAVVAYRAGSNSYFHAAAPGSSLSHLFSRSSQHTLGFDNTYGDMAQAAGSNRKAIPLGAAALESGIASLNSKNPLARTLMVIIQMLVEAARFRYIQNNVDVSIETQSAFAADAAMISLENNWANLSALVQGSSGGQGTFASSATLQNAEDEPIIVDAVYHPTVAAVLALMLRKAC 234
2 -74.7004z8s_A mol:protein length:247 rRNA N-glycosidase  ali model follow..  32  9FSADTYKSFIKNLRKQLTIGGSAGIPILKHSVPICERFLLVDLTNGDNETITLAINVEDAGFAAYRAADRSYFFQNAPPIASYVIFTDTNQNIMNFNNTFESIEIVGGTTRSETPLGIMHFEASIFHLFVHNYVPTSFLVLIQMVLEAAKFKFIEQKVIHSIMDMEDFTPGLAMLSLEENWTQLSLQLQASESLNGVFGDSVSLYNSMDEPIGVDSMYYPILTANMAFQLYQC. 246
3 -71.7001abr_A mol:protein length:251 ABRIN-A  ali model follow..  45  12ATSQSYKQFIEALRERLRGGLIHDIPVLPDPTTQERNRYITVELSNDTESIEVGIDVTNAYVVAYRAGTQSYFLRDAPSSASDYLFTGTDQHSLPFYGTYGDLERWAHQSRQQIPLGLQALTHGISFFRSGGEKARTLIVIIQMVAEAARFRYISNRVRVSIQTGTAFQPDAAMISLENNWDNLSRGVQESVQDTFPNQVTLT---NIRNEPVIVDSLSHPTVAVLALMLFVC. 247
4 -71.3001hwm_A mol:protein length:254 EBULIN  ali model follow..  35  13AKSTTYRDFLKNLRDRVATGEVNGLPVLRRESEQVKNRFVLVRLTNNGDTVTSAVDVTNLYLVAFSANGNSYFFKDATELQKSNLFLGTTQHTLSFTGNYDNLETAAGTRRESIELGPNPLDGAITSLWYDGGVARSLLVLIQMVPEAARFRYIEQEVRRSLQQLTSFTPNALMLSMENNWSSMSLEVQLSGDNVSPFSGTVQLQNYDHTPRLVDNFEELYKITGIAILLFRC. 249
5 -71.0001bry_Y mol:protein length:248 BRYODIN I  ali model follow..  31  10ATTTSYGVFIKNLREALPYERKVYNIPLLRSSISGSGRYTLLHLTNADETISVAVDVTNVYIMGYLAGDVSYFFNEASATEAAKFVFAKKKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLYYYSSAASALLVLIQSTAESARYKFIEQQIGKRVDK--TFLPSLATISLENNWSALSKQIQIASTNNGQFESPVVLIDGNNQRVSITNASARVVTSNIALLLNRN. 245
6 -70.8002jjr_A mol:protein length:247 RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN  ali model follow..  33  9ATSSSYGVFISNLRKALPNEKLYDIPLLRSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNSAASALMVLIQSTSEAARYKFIEQQIGKRVDKTFL--PSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGKVTSDIALLLNRN. 244
7 -70.8001d8v_A mol:protein length:263 ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30  ali model follow..  31  9ATAKTYTKFIEDFRATLPFSHVYDIPLLYSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKGTRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYQSAPSALLVLIQTTAEAARFKYIERHVAKYVAT--NFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPTGERFQVTNVDSDVVKGNIKLLLNSR. 242
8 -70.2002q3n_A mol:protein length:260 Agglutinin-1 A chain  ali model follow..  37  11ATPASYNQFIDALRERLTGGLIYGIPVLRDPSTEKPNQYVTVELSYDTVSIQLGIDLTNAYVVAYRAGSESFFFRNAPASASTYLFTGTQQYSLPFDGNYDDLEKWAHQSRQRISLGLEALRQGIKFLRSGEEIARTLIVIIQMVAEAARFRYVSKLVVISLSNRAAFQPDPSMLSLENTWEPLSRAVQHTVQDTFPQNVTLINVRQERVVV---SSLSHPSVSALALMLFVC. 246
9 -70.2002vs6_A mol:protein length:248 RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN  ali model follow..  33  10ATSSSYGVFISNLRKALPNEKLYDIPLLRSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNSAASALMVLIQSTSEAARYKFIEQQIGAAVDA--TFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGVVTSNIALLLNRN. 245
10 -69.9003bwh_A mol:protein length:245 cucurmosin  ali model follow..  30  9ATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYEAAASALLVLIQTTSEAARFRYIELQIANNVGT--KFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLNIG. 242
11 -69.9002b7u_A mol:protein length:257 CHARYBDIN  ali model follow..  19  19LTGQTYTDFIKNLRRSLATWYLHGVPVLPLYNQEADPRGFDLKLTFRGQVTTVRIHRDDLVLRGYQMQGAGKWLELERPSTQTGH-LIEGSELLEFGPSYEELAAAAQQDILDISYNKNALQDAVSKLAVSTDRARSLIVVSQMFCEATRFVDIANHFAFNLESSEPVKPQWMQNDLEKNWVRFSFMILKSNADPCYKFEPQTIYG-------KIIKTADELLNFLGIVEQHP. 247
12 -69.6001nli_A mol:protein length:248 Ribosome-inactivating protein alpha-trichosanthin  ali model follow..  33  10ATSSSYGVFISNLRKALPNERKLYDIPLLRSSLPGSQRYALIHLTNADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNSAASALMVLIQSTSAAARYKFIEQQIGKRVDK--TFLPSLAIISLANSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGVVTSNIALLLNRN. 245
13 -69.0001gis_A mol:protein length:248 RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN  ali model follow..  33  10ATSSSYGVFISNLRKALPNEKLYDIPLLRSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNQASATEAAKFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNSAASALMVLIQSTSEAARYKFIEQQIGKRVDKTF--LPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGVVTSNIALLLNRN. 245
14 -68.8004eb2_A mol:protein length:249 Beta-galactoside-specific lectin 1 chain A  ali model follow..  31  12TTGAEYFSFITLLRDFVSSGFSNQIPLLRQSTVSEGQRFVLVELTNGGDSITAAIDVTNLYVVAYQAGRQSYFLKDAPAGAETQDFAGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIASVTALRFPGTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALALSPGS----VVTLTNVRDVIASLAIMLFVC. 247
15 -68.7002rg9_A mol:protein length:249 Beta-galactoside-specific lectin 1 chain A isoform 1  ali model follow..  31  12TTGEEYFSFITLLRDFVSSGFSNNIPLLRQSTVSEASRFVLVELTNGGDSITAAIDVTNLYVVAYQAGQQSYFLKDAPRGAETQDFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPRTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIRLALPPGN----VVTLTNIRDVIASLAIMLFVC. 247
16 -68.6006ely_A mol:protein length:249 Mistletoe Lectin I  ali model follow..  32  12TTGAEYFSFITLLRDFVSSGFSNNIPLLRQSTVSEGSRFVLVELTNGGDSVTAAIDVTNLYVVAYQAGQQSYFLKDAPAGAETQDFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPGTQARSILILIQMISEAARFDPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIRLALSPGN----VVTLTNVRDVIASLAIMLFVC. 247
17 -68.6001puu_A mol:protein length:249 lectin I A chain  ali model follow..  31  12TTGAEYFSFITLLRDFVSSGFSNNIPLLRQSPVSEGSRFVLVELTNGGDSITAAIDVTNLYVVAYQAGQQSYFLKDAPAGAETQDFAGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIASVTALRFPRTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALALPPGN----VVTLTNIRDVIASLAIMLFVC. 247
18 -68.4001pum_A mol:protein length:249 lectin I A chain  ali model follow..  32  12TTGAEYFSFITLLRDFVSSGFSNQIPLLRQSPVSEGQRFVLVELTNGGDSITAAIDVTNLYVVAYRAGDQSYFLKDAPAGAETQDFAGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIASVTALRFPRTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALALSPGS----VVTLTNVRDVIASLAIMLFVC. 247
19 -68.3001oql_A mol:protein length:249 MISTLETOE LECTIN I  ali model follow..  31  12TTGDEYFRFITLLRDYVSSGFSNEIPLLRQSTVSDAQRFVLVELTNGGDSITAAIDVTNLYVVAYQAGDQSYFLRDAPRGAETHLFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPRTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIRLAIPPGN----FVTLTNVRDVIASLAIMLFVC. 247
20 -67.9001nio_A mol:protein length:247 b-luffin  ali model follow..  28  10ADSKSYSKFITALRKALPSKEKVSNIPLLLPSASGASRYILMQLSNDAKAITMAIDVTNVYIMGYLVNSTSYFFNESDAKLASQVFKGSTIVTLPYSGNYERLQNAAGKVREKIPLGFRAFDSAITSLFHYDAAAGAFLVIIQTTAEASRFKYIEGQIIKRIPKNE--VPSPAALSLENEWSALSKQIQLAQTNNGAFRTPVVIIDNKGQRVEIKDVNSKVVTNNIKLLLNKQ. 244
21 -67.9001mom_A mol:protein length:246 MOMORDIN  ali model follow..  28  9ADPRSYGMFIKDLRNALPFREKVYNIPLLLPSVSGAGRYLLMHLFNDGKTITVALDVTNVYIMGYLADTTSYFFNEPAAELASQYVDARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDSAISTLLHYDAAAGALLVLIQTTAEAARFKYIEQQIQERAYR--DEVPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNVTSKVVTSNIQLLLNTR. 244
22 -67.7004jkx_A mol:protein length:249 Beta-galactoside-specific lectin 1 A chain  ali model follow..  32  12TTGAEYFSFITLLRDYVSSGFSNQIPLLRQSTVSEGQRFVLVELTNGGDSITAAIDVTNLYVVAYQAGDQSYFLKDAPAGAETQDFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPGTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIRLALAPAN----IVTLTNVRDVIASLAIMLFVC. 247
23 -67.6003mrw_A mol:protein length:246 Ribosome inactivating protein  ali model follow..  28  9ADPSSYGMFIKDLRNALPHTEVYNIPLLLPSVSGAGRYLLMHLFNYDGNTITVAVDVTNVYIMGYLALTTSYFFNEPAADLASQYVFARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDTAISTLLHYDAAAGALLVLIQTTAEAARFKYIEQQIQERAYR--DEVPSSATISLENSWSGLSKQIQLAQGNNGVFRTPTVLVDSKGNRVQITNVTSNVVTSNIQLLLNTK. 244
24 -67.2003ctk_A mol:protein length:248 rRNA N-glycosidase  ali model follow..  24  9GEAYEYPTFIQDLRNELAKGTVCQLPVTLQTIADDKRFVLVDITTTSKKTVKVAIDVTDVYVVGYQDKWDGKDRAVFLDKVPTVATSVTNRVTLTFDGSYQKLVNAAKVDRKDLELGVYKLEFSIEAIHGKTEIAKFFLIVIQMVSEAARFKYIETEVVDRGLYG-SFKPNFKVLNLENNWGDISDAIHKSSPQCTTINPALQLISPSNDPWVVN--KVSQISPDMGILKFKS. 248
25 -67.1001m2t_A mol:protein length:254 mistletoe lectin I A chain  ali model follow..  31  12TTGAEYFSFITVLRDYVSSGFSNNIPLLRQSTVSEGQRFVLVELTNGGDTITAAIDVTNLYVVAYEAGNQSYFLSDAPAGAETQDFSGTTSSSQPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPKTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALAIAPGV----IVTLTNIRDVIASLAIMLFVC. 247
26 -67.0004q2v_A mol:protein length:279 Ricin  ali model follow..  29  21ATVQSYTNFIRAVRGRLTTGVRHEIPVLPNRVGPINQRFILVELSNAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFSVYDVSILIPIIALMVYRC. 264
27 -67.0001onk_A mol:protein length:254 Beta-galactoside specific lectin I A chain  ali model follow..  31  12TTGEEYFRFITLLRDYVSSGFSNEIPLLRQSTVSDAQRFVLVELTNGQDSVTAAIDVTNAYVVAYQAGDQSYFLRDAPRGAETHLFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPRTQARSILILIQMISEAARFNPILWRYRQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIRLAIPPGN----FVTLTNVRDVIASLAIMLFVC. 247
28 -66.6002oqa_A mol:protein length:241 Luffaculin 1  ali model follow..  29  9SSSTSYSKFIGALRKALPSNGTVYNITLLLSSASGASRYTLMKLSNDGKAITVAIDVTNVYIMGYLVNSTSYFFNESDAKLASQVFAGSTIVTLPYSGNYEKLQTAAGKIREKIPLGFPALDSAITTLFHYTAAAAAFLVIIQTTAESSRFKYIEGQIIMRISK--NGVPSLATISLENEWSALSKQIQLAQTNNGTFKTPVVIMDAGGQRVEIGNVGSKVVTKNIQLLLN... 241
29 -66.5005gu4_A mol:protein length:301 Ricin  ali model follow..  29  44ATVQSYTNFIRAVRGRLTTGVRHEIPVLPNRVGPINQRFILVELSNAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFSVYDVSILIPIIALMVYRC. 287
30 -66.5003o5w_A mol:protein length:254 Beta-galactoside-specific lectin 1 chain A isoform 1  ali model follow..  32  12TTGAEYFSFITLLRDYVSSGFSNNIPLLRQSPVSEGQRFVLVELTNGGDSITAAIDVTNLYVVAYQAGDQSYFLSDAPAGAETHDFTGTTRSSLPFNGSYPDLERYAG-HRDQIPLGIDQLIQSVTALRFPGTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALAIAPGN----IVTLTNVRDVIASLAIMLFVC. 247
31 -66.4001ce7_A mol:protein length:241 PROTEIN (RIBOSOME-INACTIVATING PROTEIN TYPE II)  ali model follow..  33  12TTGAGYFSFITLLRDYVSSGFSNAIPLLSQSGGGEAGRFVLVELTNGGDGITVAIDVTNLYVVAYQAGSQSYFLSGPGGRHG---FTGTTRSSLPFNGSYPDLEQYGG-QRKQIPLGIDQLIQSVTALKFPRTGARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQHSTDGVFNNPIALADPGGG-----VTLTNVRDVIASLAIMLFV-C 241
32 -66.3001f8q_A mol:protein length:263 ALPHA-MOMORCHARIN  ali model follow..  29  9ADPRSYGMFIKDLRNALPFREVYNIPLLLPSVSGAGRYLLMHLFNRDGKTITVAVDVTNVYIMGYLADTTSYFFNEPAAELASQYVDARRKITLPYSGDYERLQIAAGKPREKIPIGLPALDSAISTLLHYDAAAGALLVLIQTTAEAARFKYIEQQIQERAYRDE--VPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNVTSKVVTSNIQLLLNTR. 244
33 -66.3001pc8_A mol:protein length:240 Himalayan mistletoe ribosome-inactivating protein  ali model follow..  33  12TTGEEYFRFITLLRDYVSSGSSNEIPLLRQSGGVEAARFVLVELTNGGDSITAAIDVTNLYVVAYQAGSQSYFLSGPGTH----LFTGTTRSSLPFNGSYPDLEQYAG-HRKQIPLGIDQLIQSVTALRFPGTQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWGQQSTQVQQSTEGVFNNPIRLAIPGNF-----VTLTNVRDVIASLAIMLFV-C 240
34 -66.2003bjg_A mol:protein length:268 Ricin A chain (rRNA N-glycosidase)  ali model follow..  30  17ATVQSYTNFIRAVRGRLTTGVRHEIPVLPNRGLPINQRFILVELSNAELSVTLALDMTNAAVVGYRAGNSAYFFHPDNQEDAEAFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFSVYDVSILIPIIALMVYRC. 260
35 -66.1004hr6_B mol:protein length:206 LECTIN  ali model follow..  34  1....................................NRFYLLTLTSKDESITLAIDVEDMVAVAYQPAGSHESYFNAPQLAFHTLFTDTHQNVLNFDNTFKSLENAAGTTRQTIVLGVDPLDFAISNLFNAKLLPLSFLVIIQMVLEASKFRFIEQSVAYSFKNEKTFIPDLAIVSLEDNWSEISLQIQASTSLQGLFGSVVELYNSNNELIEVDSIYYPIILANVALQLYHC. 202
36 -66.1005u4l_A mol:protein length:271 Ricin  ali model follow..  29  20ATVQSYTNFIRAVRGRLTTGVRHEIPVLPNRGLPINQRFILVELNHAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAITDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFSVYDVSILIPIIALMVYRC. 263
37 -66.0005y97_B mol:protein length:209 Seed lectin  ali model follow..  34  1...................................SNRFYLLTLTSQDESITLAIDVEDMVAVAYQPAGSHESYFNAPQIAFHTLFTDTHQNVLNFDNTFKSLENAAGTTRQTIVLGVDPLDFAISNLFNADLLPLSFLVIIQMVLEASKFRFIEQSVAYSFKNEKTFLPDLAIVSLEDNWSEISLQIQASTSLQGLFGSVVELYNSNNELIEVDSIYYPIILANVALQLYHC. 203
38 -66.0003ktz_A mol:protein length:251 Ribosome-inactivating protein gelonin  ali model follow..  26  12ATYITYVNFLNELRVKLKPENSHGIPLLRKKCDDPGKCFVLVALNDNGQLAEIAIDVTSVYVVGYQVRNRSYFFKDAPDAAYEGLFKNTIKTRLHFGGSYPSLEGEKA-YRETTDLGIEPLRIGIKKLDENTEIASSLLVVIQMVSEAARFTFIENQIRNNFQQ--RIRPANNTISLENKWGKLSFQIRTSGANGMF---SEAVELERANGKKYYVTAVDQVKPKIALLKFVD. 247
39 -65.7005ddz_A mol:protein length:275 Ricin  ali model follow..  30  18ATVQSYTNFIRAVRGRLTTGVRHEIPVLPNRGLPINQRFILVELSNAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAITDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFSVYDVSILIPIIALMVYRC. 261
40 -64.6001rzo_A mol:protein length:262 Agglutinin  ali model follow..  30  16ATVESYTNFIRAVRSHLTTGARHEIPVLPNRGLPISQRFILVELSNAELSVTLALDVTNAYVVGCRAGNSAYFFHPDNQEDAELFTDVQNSFTFAFGGNYDRLEQLGG-LRENIELGTGPLEDAISALYYYSTLARSFMVCIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGS----KFNVYDVSILIPIIALMVYRC. 258
41 -64.5003mvg_A mol:protein length:275 Ribosome inactivating type 1 protein  ali model follow..  26  11TTRRSYSDFLQNLRNRLSSGSVHDIPLLPAQSGSQQDLLFVRLFDWGNRPITLVLNRVNAYVVAYQAQNRFYLLSDTPANPQV---YGNNPHRLTFTGSYGALQNVAKSNRENIDLGINPLATAITTLHNWTSVARSLIVLIQLVSETARFRAIEQRVTNNIIDQVNFRPRVGIIDLQTNWQTLSTEVQRAEGGRFLQPVKLQVSVQQ----TVVISDVEKARTFCGLALLLR. 249
42 -64.5002k6h_A mol:protein length:248 Ribosome-inactivating protein  ali model follow..  14  16DANYPYSAFIASVRKDVIKHCGIFQPVLPPEK-KVPELWLYTELKTRTSSITLAIRMDNLYLVGFRTPGGVWWEFGKDGDTHL---LGDNPRWLGFGGRYQDLI--GNKGLETVTMGRAEMTRAVNDLAKKADTKSKLVKLVVMVCEGLRFNTVSRTVDAGFNSQHGVTLTVTQGKQVQKWDRISKAAFEWADHPTAVIPDMQ---------KLGIKDKNEAARIVALVKNQT. 244
43 -64.4001lln_A mol:protein length:262 Antiviral Protein 3  ali model follow..  20  9ATPETYSNFLTSLREAVKDKKLTCHGMIMATTLTEQPKYVLVDLKFGSGTFTLAIRRGNLYLEGYSDIYNGKCRYRIFKDSESDAQEPGTQNNIPYEKSYKGMESKGG-ARTKLGLGKITLKSRMGKIYGKKNEAEFLLIAVQMVTEASRFKYIENKVKAKFDDANGYQPDPKAISLEKNWDSVSKVIAKVGTSGDSTVTL-PGDLKDENNKPWTTATMNDLKNDIMALLTHVT 258
44 -63.6002pqg_A mol:protein length:265 Ribosome-inactivating protein 3  ali model follow..  14  10DANYPYSAFIASVRKDVIKHCGIFQPVLPPEKKVPEL-WLYTELKTRTSSITLAIRMDNLYLVGFRTPGGVWWEFGKDGDTHL---LGDNPRWLGFGGRYQDLIGNK--GLETVTMGRAEMTRAVNDLAKKADTKSKLVKLVVMVCEGLRFNTVSRTVDAGFNSQHGVTLTVTQGKQVQKWDRISKAAFEWADHPTAVIPDMQ---------KLGIKDKNEAARIVALVKNQT. 263
45 -62.7001r4p_A mol:protein length:297 shiga-like toxin type II A subunit  ali model follow..  16  8STQQSYVSSLNSIRTEISTPLEHGTTSVSVINHTPPGSYFAVDIQARFDHLRLIIEQNNLYVAGFVNTATNTFYRFSDFTHIS--VPGVTTVSMTTDSSYTTLQRVAALERSGMQISRHSLVSSYLALMEFSDASRAVLRFVTVTAEALRFRQIQREFRQALSETAPYTMTPGDVDLTLNWGRISNVLPEYRGEDGVRVGR------------ISFNNISAILGTVAVILNCH. 242
46 -62.6001apa_A mol:protein length:266 POKEWEED ANTIVIRAL PROTEIN  ali model follow..  20  16ATINKYATFMKSIHNQAKDPTLKCYGIPMLPNTNLTPKYLLVTLQDSLKTITLMLKRNNLYVMGYADTYNGKCRYHIFKDISNTTERSRVGKNINYDSSYPALEKKVGRPRSQVQLGIQILNSGIGKIYGVDTEAEFLLVAIQMVSEAARFKYIENQVKTNFNR--AFYPNAKVLNLEESWGKISTAIHNAKNGALTSPLELKNANGS----KWIVLRVDDIEPDVGLLKYVN. 260
47 -62.0003hiq_A mol:protein length:345 Vacuolar saporin  ali model follow..  25  91TTKAQYSTFLKQLRDDIKDPNLTNLPVIKRPVGPPK--FLRVNLKASTGTVSLAVQRSNLAVAAYLAKNNNKQFRNQLNNLFPEATGVSNQQELGYGESYPQIQNAAGVTRQQAGLGIKKLAESMTKVNGVKDEALFLLIVVQMVGEAARFKYIENLVLNNFDTAKEEPVPDRVIILENNWGLLSRAAKTANNGVFQTPLVLTSYAVP----GVEWRVTTVAEVEIGIFLNVD. 337
48 -61.6004p2c_A mol:protein length:297 Shiga toxin 2e, subunit A  ali model follow..  15  8STQQSYVSSLNSIRTAISTPLEGATSVSVINHTPPGS-YISVGIQERFDHLRLIIERNNLSVAGFVNTTTNTFYRFSDFAHIS--LPGVTTISMTTDSSYTTPQRVAALERSGMQVSRHSLVSSYLALMEFSEASRAVLRFVTVTAQALRFRQIQREFRQALSETPVYTMTPEDVDLTLNWGRISNVLPEYRGEAGVRVGR------------ISFNNISAILGTVAVILN... 240
49 -61.5001rl0_A mol:protein length:255 Antiviral protein DAP-30  ali model follow..  22  11PSASQYSSFLDQIRNNVRDTIYGGTDVAVIGAPSTTDKFLRLNFQGPRGTVSLGLRRENLYVVAYLAMDNANVNRSAELTALFPEVVVANQKQLEYGEDYQAIEKNAKQSRKELGLGINLLITMIDGVNKKVDEARFLLIAIQMTAEAARFRYIQNLVTKNFPN--KFDSENKVIQFQVSWSKISTAIFGDCKNG-----------VFNKDYDFGFGKVRQAKDLMGLLKYLG. 251
50 -61.4001r4q_A mol:protein length:293 SHT cytotoxin A subunit  ali model follow..  20  8STAKTYVDSLNVIRSAIGTPISSGGTSLLMIDSGTGDNLFAVDVEGRFNNLRLIVERNNLYVTGFVNRTNNVFYRFADFSH--VTFPGTTAVTLSGDSSYTTLQRVAGISRTGMQINRHSLTTSYLDLMSHSSVARAMLRFVTVTAEALRFRQIQRGFRTTLDDLRSYVMTAEDVDLTLNWGRLSSVLPDYHGQDSVRVGR------------ISFGSINAILGSVALILNCH. 243
51 -61.3001qi7_A mol:protein length:253 PROTEIN (N-GLYCOSIDASE)  ali model follow..  22  11PTAGQYSSFVDKIRNNVKDPNLYGGTDIAVIGPPSKEKFLRINFQSSRGTVSLGLKRDNLYVVAYLAMDNTNVNRSAELTALFPEATTANQKALEYTEDYQSIEKNAQKSRKELGLGIDLLLTFMEAVNKKKNEARFLLIAIQMTAEVARFRYIQNLVTKNFPN--KFDSDNKVIQFEVSWRKISTAIYGDAKNG-----------VFNKDYDFGFGKVRQVKDLMGLLMYLG. 250
52 -61.2002g5x_A mol:protein length:234 Ribosome-inactivating protein  ali model follow..  20  8SDSAKYSSFLDSLREEFGRGTVCNIPVTKKA---NNDKFVLVNLPFNRNTITLAFRASDAYLVGFQDRDSKTNKLRSGKYKSIFTDAEVLAPALPCASTYTDLQNKAGVSREKLSLGVSSLQTAFTAVYGKVNVAKFALISIQMVAEAARFKYIEDQVINRGMYS-SFEAGARITLLENNWSKISEQYHKSCKLGGGQFTEEEMK............................. 227
53 -61.1002q8w_A mol:protein length:261 POKEWEED ANTIVIRAL PROTEIN  ali model follow..  18  11ATINKYATFMESLRNEAKDPSLKCYGIPMLPNTNSTIKYLLVKLQGSLKTITLILRRNNLYVMGYSDPYDNKCRYHIFNDIKGTEYSDRVAKPINYNGLYPTLENKAGTSRNQVQLGIQILSSDIGKISGQKTEAKFLLVAIQMVPEAARFKYIENQVKTNFNR--DFFPNDKVLELEENWGKISTAIHDAKNGALPKPLELKNADGT----KWIVLRVDEIKPDVGLLKYVN. 255
54 -61.1001gik_A mol:protein length:261 ANTIVIRAL PROTEIN S  ali model follow..  19  11ATINKYATFMESLRNEAKDPSLKCYGIPMLPNTNSTIKYLLVKLQGSLKTITLMLRRNNLYVMGYSDPYDNKCRYHIFNDIKGTEYSPRVAKPINYNGLYPTLEKKAGTSRNEVQLGIQILSSDIGKISGQGIEAKFLLVAIQMVSEAARFKYIENQVKTNFNR--DFSPNDKVLDLEENWGKISTAIHNSKNGALPKPLELKNADGT----KWIVLRVDEIKPDVGLLNYVN. 255
55 -61.0002qes_A mol:protein length:261 Ribosome-inactivating protein PD-L4  ali model follow..  21  11ATINKYATFMESLRNEAKDPTLKCYGIPMLPDSNLTPKYVLVKLQDSSKTITLMLRRNNLYVMGYSDLYNGKCRYHIFNDISSTESTSREKKAINYNSQYSTLQNKAGSSRSQVQLGIQILNSDIGKISGVSTEAEFLLVAIQMVSEAARFKYIENQVKTNFNR--AFNPNPKVLSLEENWGKISLAIHNAKNGALTSPLELKNADDT----KWIVLRVDEIKPDMGLLNYVS. 255
56 -61.0004fb9_A mol:protein length:282 Protein synthesis inhibitor I  ali model follow..  16  23ASSADYATFIAGIRNKLRNPFSHNRPVLPPVEPNPPSRWFHVVLSPTSAGLTLAIRADNIYLEGFKSSDGTWWELTPGL--------IPGATYVGFGGTYRDLLGDTD-KLTNVALGRQQLADAVTALHGRQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKASGKIGNEMKAQVNGWQDLSAALLKTDVKPPPGKSPAKFAPIE----KMGVRTAVQAANTLGILLFVE. 262
57 -60.9004fbh_A mol:protein length:281 Protein synthesis inhibitor I  ali model follow..  16  22ASSADYATFIAGIRNKLRNPFSHNRPVLPPVEPNPPSRWFHVVLSPTSAGLTLAIRADNIYLEGFKSSDGTWWELTPGL--------IPGATYVGFGGTYRDLLGDTD-KLTNVALGRQQLADAVTALHGRTQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKASGKIGNEMKAQVNGWQDLSAALLKTDVKPPPGKSPAKFAPIE----KMGVRTAVQAANTLGILLFVE. 261
58 -60.6001d6a_A mol:protein length:262 POKEWEED ANTIVIRAL PROTEIN  ali model follow..  19  11TTISKYATFLNDLRNEAKDPSLKCYGIPMLPNTNTNPKYVLVELQGNKKTITLMLRRNNLYVMGYSDPFETYHIFNDISGTERQDVNSRVSKNINFDSRYPTLESKAGKSRSQVQLGIQILDSNIGKISGVKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNR--AFNPNPKVLNLQETWGKISTAIHDAKNGVLPKPLELVDASGA----KWIVLRVDEIKPDVALLNYVG. 256
59 -60.2003h5k_A mol:protein length:261 Ribosome-inactivating protein PD-L1/PD-L2  ali model follow..  18  11TTINKYATFMESLRNEAKDPSLQCYGIPMLPNNSSTIKYLLVKLQGSQKTITLMLRRNNLYVMGYSDPFNGHIFNDITGTERTNVENSRDAKPINYNSLYSTLEKKAENSRSQVQLGIQILSSDIGKISGQSTEAKFLLVAIQMVSEAARFKYIENQVKTNFNR--DFSPNDKILDLEENWGKISTAIHDATNGALPKPLELKNADGT----KWIVLRVDEIKPDMGLLNYVN. 255
60 -53.2003lc9_A mol:protein length:189 Ricin A chain  ali model follow..  29  17ATVQSYTNFIRAVRGRLTVLP-------NCVGLPINQRFILVELSNAELSVTLALDVCNAYVVGYRAGNSAYFFHPDNQEDAELFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRS.................................................................. 189
61 -53.1003mk9_A mol:protein length:189 Ricin  ali model follow..  30  17ATVQSYTNFIRAVRGRLTVLP-------NRCGLPINQRFILVELSNAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQCDAEAFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRS.................................................................. 189
62 -52.9005sv3_B mol:protein length:190 Ricin  ali model follow..  30  18ATVQSYTNFIRAVRGRLTVLP-------NRVGLPINQRFILVELSNAELSVTLALDVTNAYVVGYRAGNSAYFFHPDNQEDAEAFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRS.................................................................. 190
63 -51.7002vlc_A mol:protein length:570 TYPE 2 RIBOSOME-INACTIVATING PROTEIN CINNAMOMIN III  ali model follow..  38  33ATKTSYTQFIEALRAQLASEEPHGIPVMRERSTPDSKRFILVELSAADSPVTLAVDVTNAYVVAYRTGSQSFFLRDNPDPAIENLLPDTKRYTFPFSGSYTDLERVAGERREEILLGMDPLENAISALWISNALARSLIVVIQMVAEAVRFRFIEYRVRESISRAEMFRPDPAMLSLENKWSALSNAVQQSNQGG....................................... 237
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.