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Query: 1t0q_A mol:protein length:498 toluene, o-xylene monooxygenase oxygenase subunit, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSMLKREDWYDLTRTTNWTPKYVTENELFPEEMSGARGISMEAWEKYDEPYKITYPEYVSIQREKDSGAYSIKAALERDGFVDRADPGWVSTMQLHFGAIALEEYAASTAEARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAIAARSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFKEFMLEWIVAQFERQLLDLGLDKPWYWDQFMQDLDETHHGMHLGVWYWRPTVWWDPAAGVSPEEREWLEEKYPGWNDTWGQCWDVITDNLVNGKPELTVPETLPTICNMCNLPIAHTPGNKWNVKDYQLEYEGRLYHFGSEADRWCFQIDPERYKNHTNLVDRFLKGEIQPADLAGALMYMSLEPGVMGDDAHDYEWVKAYQKKTNAALast
1 -157.0001t0q_A mol:protein length:498 toluene, o-xylene monooxygenase oxygenase subunit  ali model  100  1MSMLKREDWYDLTRTTNWTPKYVTENELFPEEMSGARGISMEAWEKYDEPYKITYPEYVSIQREKDSGAYSIKAALERDGFVDRADPGWVSTMQLHFGAIALEEYAASTAEARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAIAARSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFLGLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVENGKKDEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFKEFMLEWIVAQFERQLLDLGLDKPWYWDQFMQDLDETHHGMHLGVWYWRPTVWWDPAAGVSPEEREWLEEKYPGWNDTWGQCWDVITDNLVNGKPELTVPETLPTICNMCNLPIAHTPGNKWNVKDYQLEYEGRLYHFGSEADRWCFQIDPERYKNHTNLVDRFLKGEIQPADLAGALMYMSLEPGVMGDDAHDYEWVKAYQKKTNAA 498
2 -140.0003dhg_A mol:protein length:500 toluene 4-monooxygenase hydroxylase alpha subunit  ali model follow..  66  1MAMHPRKDWYELTRATNWTPSYVTEEQLFPERMSGHMGIPLEKWESYDEPYKTSYPEYVSIQREKDAGAYSVKAALERAKIYENSDPGWISTLKSHYGAIAVGEYAAVTGEGRMARFSKAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSNEWAAIAAKHFFDDIITGRDAISVAIMLTFSFETGFTNMQFLGLAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIENGKREEAQKKVDMAIWRAWRLFAVLTGPVMDYYTPLEDRSQSFKEFMYEWIIGQFERSLIDLGLDKPWYWDLFLKDIDELHHSYHMGVWYWRTTAWWNPAAGVTPEERDWLEEKYPGWNKRWGRCWDVITENVLNDRMDLVSPETLPSVCNMSQIPVGVPGDDWNIEV-FSLEHNGRLYHFGSEVDRWVFQQDPVQYQNHMNIVDRFLAGQIQPMTLEGALKYMGFQIEEMGKDAHDFAWADKCKPAMKKS 499
3 -117.0002inn_A mol:protein length:511 Phenol hydroxylase component phN  ali model follow..  22  7.KLNLKDKYQYLTRDMAWEPTYQDKKDIFPE--EDFEGIKITDWSQWEDPFRLTMDAYWKYQAEKEKKLYAIFDAFAQNNGHQNIDARYVNALKLFISGISPLEHAAFQGYSKVGRQFSGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDG-PHMHDRVWYLSVPKSFFDDARSAGPF-EFLTAISFSFEYVLTNLLFVPFMSGAAYNGDMATVTFGFSAQSDEARHMTLGLEVIKFILEQDNVPIVQRWIDKWFWRGFRLLSLVSMMMDYMLPNKVMSWSEAWEVYYEQNGGALFKDLERYGIRPPKYQDVANDAKHHLSHQLWTTFYQYCQATNFH-TWIPEKEEMDWMSEKYPDTFDKYRPRYEYLAKEAAAGR--RFYNNTLPQLCQVCQIPTIFTEKDAPTMSHRQIEHEGERYHFCSDGCCDIFKHEPEKYIQAWLPVHQIYQGNCEGGDLETVVQKYYINIGEDNFDYVGSPDQKHWLSIKGRK 502
4 -117.0001mhy_D mol:protein length:521 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  18  5LATKAATNRAPVGVEPQEVHKWLQSFNWDFKENRTKYPTKYHMANETKEQFKVIAKEYARMEAAKDERQFGTLDGLTRLGAGNKVHPRWGETMKVISNFLEVGEYNAIAASAMLWDSATAAEQKNGYLAQVLDEIRHTHQCAFINHYYSKHYHDPAGHNDRTRAIGPLWKGMKRVFADGFISGDAVECSVNLQLVGEACFTNPLIVAVTEWASANGDEITPTVFLSVETDELRHMANGYQTVVSIANDASAKFLNTDLNNAFWTQQKYFTPVLGYLFEYGSKVEPWVKTWNRWVSEDWGGIWIGRLGKYGVESPRSLRDAKRDAYWAHHDLALAAYAMWPLGFA-RLALPDEEDQAWFEANYPGWADHYGKIFNEWKKLGYEDPKSGFIPGHDVYIDRVSQVPFIPSLAKGTGSL-RVHEFNGKKHSLTDDWGERQWLIEPERYECH-NVFEQYEGRELSEVIAEG-VRSDGKTLIAQPHTRGDNLWTLEDIKRAGCV 513
5 -112.0001fyz_A mol:protein length:527 METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN  ali model follow..  20  1MA---STATKAATDALAFNWDFKNNRTKYA--------TKYKMANETKEQFKLIAKEYARMEAVKDERQFSLQDALTRLNAGVRVHPKWNETMKVVSNFLEVGEYNAIAATGMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGDARRTRTIGPLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVAVTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVSIANDASAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKFKPWVKTWDRWVYEDWGGIWIGRLGKYGVESPRSLKDAKQDAYWAHHDLYLLAYALWPTGFF-RLALPDQEEMEWFEANYPGWYDHYGKIYEEWRARGCEDPSSGFIPNHPIYIDRVSQVPFCPSLAKGASTL-RVHEYNGEMHTFSDQWGERMWLAEPERYECQ-NIFEQYEGRELSEVIAELHG--LIAQPHVRGDK----LWTLDDIKRLNCV 518
6 -76.9001t0q_B mol:protein length:330 toluene, o-xylene monooxygenase oxygenase subunit  ali model follow..  13  22..RRRPSEYEVVSTNLHWELDSNLPMQTWYKKYCFDSPLKHDDWNAFRDPDQLVYRTYNLLQDGQESYVQGLFDQLNDRGHDQMLTREWVETLARFYTPARYLFHALQMGSVYIHQIAPASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGKRERDVWENDPAWQGFRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQLGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEKENREVLQKWVAKWEPLADKAIEAYCSALPDGENAIVEAKSASRYV------------RQMMGL........................................................................................................................................................................................... 330
7 -73.9003dhg_B mol:protein length:327 toluene 4-monooxygenase hydroxylase beta subunit  ali model follow..  14  19..RKKPSEYDIVSRKLHYSLSPDSPMNLWYKQYRNASPLKHDNWDAFTDPDQLVYRTYNLMQDGQESYVQSLFDQFNEREHDQMVREGWEHTMARCYSPLRYLFHCLQMSSAYVQQMAPASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLHERELWEKEPGWQGLRELMEKQLTAFDWGEAFVSLNLVVKPMIVESIFKPLQQQAWENNDTLLPLLIDSQLKDAERHSRWSKALVKHALENPNHAVIEGWIEKWRPLADRAAEAYLSMLSSDILPAQYLERSTSLRAS........................................................................................................................................................................................................... 323
8 -72.8002inn_C mol:protein length:333 Phenol hydroxylase component phL  ali model follow..  12  25.GDKPATRYQEASYDIEAKTNFHYRPQEHTLNDPTRTAIRMEDWCAVSDPRQFYYGAYVGNRAKMQESAETSFGFCEKRNLLTRLSEETQKQLLRLLVPLRHVELGANMNNAKIAGDATATTVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESKAYWMDDEMWQPMRKLVEDTLVVDDWFELTLVQNILIDGMMYPLVYDKMDQWFESQGAEDVSMLTEFMRDWYKESLRWTNAMMKAVAGESNRELLQKWIDHWEPQAYEALKPLAEASVG-------------IDGLNEARAELSARLKKFELQSRG....................................................................................................................................................................................... 330
9 -64.1001mhy_B mol:protein length:395 METHANE MONOOXYGENASE HYDROXYLASE  ali model follow..  14  46..WKPLSEYEQLSCYAQWTQKFHGGRPSWGNES---TELRTTDWYRHRDPARRWHHPYVKDKSEEARYTQRFLAAYSSEGSIRTIDPYWREILNKYFGALLYSEYGLFNAHSSVGRDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASPKKIWTTDPIYSGARATVQEIWQGQDWNEILWAGHAVYDATFGQFARREFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLFVYCLANDNRTFLNAWTEHYLASSVAALKDFVGLYAKVEKVAGATDSAGVSEALQRVFGDWIDYADKIGFRVDVD...................................................................................................................................................................................... 383
10 -62.8001fyz_C mol:protein length:389 METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN  ali model follow..  15  43..WKRLTEYEALTVYAQWTQKFHGGRPSWG---NETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWRDFINRYWGAFLFNEYGLFNAHSQGAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDAVPKAEWTNGEVYKSARLAVEGLWQEFDWNESAFSVHAVYDALFGQFVRREFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTD-----KEEITASLYRVVDDWIEDYASRIDFKADRDQIVKAVLA.......................................................................................................................................................................... 386
11 -61.7001mmo_B mol:protein length:384 METHANE MONOOXYGENASE HYDROLASE (BETA CHAIN)  ali model follow..  14  38..WKRLTEYEALTVYAQWTQKFHGGRPSWG---NETTELRTVDWFKHRDPLRRWHAPYVKDKAEEWRYTDRFLQGYSADGQIRAMNPTWTSSCNRYWGAFLFNEYGLFNAHSQGAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDAVPKAEWTNGEVYKSARLAVEGLWQVFDWNESAFSVHAVYDALFGQFVRREFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYNCLGDDNRTVMRNWTGKWLEPTIAALRDFMGLFAKLPAGTTDKEEI-TASLYRVVDDWIEDYASAIDFKADQIVKAVLAGLK............................................................................................................................................................................. 384
12 -36.8005ux2_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  12  5..................................................................................DFASAAYREAYSRINGVVIVGEGLANRHFQMLARRIP--ADRDELQRLGRMEGDHASAFVGCGRNLGVVADL---------LARRLFQPLHDLFKRHDHDGNRAECLVIQGLIVECFAVAAY-----RHYLPVADAYARPITAAVMNDESEHLDYAETWLQRHFDQ-VKARVSAVVVEALPLTLAMLQSLAADMRQIGMD--------PVETLASFSELFREALESVGFEAVEARRLLMRAAA............................................................................................................................................................................. 223
13 -35.0004quw_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  12  1........................................................................MPQLEASLELDFQSESYKDAYSRINAIVIEGEQEAFDNYNRLAEMLP--DQRDELHKLAKMEQRHMKGFMACGKNLSVTPDMG--------FAQKFFERLHENFKAAAAEGKVVTCLLIQSLIIECFAIAAY-----NIYIPVADAFARKITEGVVRDEYLHRNFGEEWLKANFDA-SKAELEEANRQNLPLVWLMLNEVADDARELGME--------RESLVEDFMIAYGEALENIGFTTREIMRMSAYGLAAV........................................................................................................................................................................... 231
14 -34.8004z5s_A mol:protein length:231 Aldehyde decarbonylase  ali model follow..  14  1........................................................................MPELAVRTEFDYSSEIYKDAYSRINAIVIEGEQEAYSNYLQMAELLP--EDKEELTRLAKMENRHKKGFQACGNNLQVNPDM---------YAQEFFAGLHGNFQHAFSEGKVVTCLLIQALIIEAFAIAAY-----NIYIPVADDFARKITEGVVKDEYTHLNYGEEWLKANFAT-AKEELEQANKENLPLVWKMLNQVQGDAKVLGME--------KEALVEDFMISYGEALSNIGFSTREIMRMSSYGLAGV........................................................................................................................................................................... 231
15 -34.6005uwz_A mol:protein length:243 Aldehyde decarbonylase  ali model follow..  11  3.........................................................................RTAPSSAALDYRSDTYRDAYSRINAIVLEGEREAHANYLTLAEMLP--DHAEALKKLAAMENRHFKGFQSCARNLEVTPDD---------FARAYFEQLDGNFQQAAAEGDLTTCMVIQALIIECFAIAAY-----NVYIPVADAFARKVTEGVVKDEYTHLNFGQQWLKERFVTVREG-IERANAQNLPIVWRMLNAVEADTEVLQMD--------KEAIVEDFMIAYGEALGDIGFSMRDVMKMSARGLA............................................................................................................................................................................. 230
16 -34.3004kvr_A mol:protein length:244 Aldehyde decarbonylase  ali model follow..  11  25..................................................................................DFTSDRYKDAYSRINAIYIEGEQEAHDNYIAIGTLLP--DHVEELKRLAKMEMRHKKGFTACGKNLGVEADM---------FAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAY-----HTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREE-LLEANRENLPLIRRMLDQVAGDAAVLQMD--------KEDLIEDFLIAYQESLTEIGFNTREITRMAAAAL.............................................................................................................................................................................. 242
17 -34.2005uxi_A mol:protein length:234 Aldehyde decarbonylase  ali model follow..  11  1.......................................................................MQQLTDQSKELDFKSETYKDAYSRINAIVIEGEQEAHENYITLAQLLP--ESHDELIRLSKMESRHKKGFEACGRNLAVTPDLQ--------FAKEFFSGLHQNFQTAAAEGKVVTCLLIQSLIIECFAIAAY-----NIYIPVADDFARKITEGVVKEEYSHLNFGEVWLKEHFAE-SKAELELANRQNLPIVWKMLNQVEGDAHTMAME--------KDALVEDFMIQYGEALSNIGFSTRDIMRLSAYGL.............................................................................................................................................................................. 229
18 -33.4004pgi_A mol:protein length:250 Aldehyde decarbonylase  ali model follow..  11  25..................................................................................DFTSDRYKDAYSRINAIVIEGEQEAHDNYIAIGTLLP--DHVEELKRLAKMEMRHKKGFTACGKNLGVKADM---------FAREFFAPLRDNFQTALGQGKTPTCLLIQALLIEAFAISAY-----HTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREE-LLEANRENLPLIRRMADQVAGDAAVLQMD--------KEDLIEDFLIAYQESLTEIGFNTREITRMAAAAL.............................................................................................................................................................................. 242
19 -32.3005k52_A mol:protein length:265 Aldehyde decarbonylase  ali model follow..  12  37..................................................................................DYQSETYKDAYSRINAIVIEGEDEAANNYVRLAELMP--EQSEELASLAKMEARHKKGFTACGKNLNVTPDM---------FAKKFFSDLHGNFQVAAAAGNIVTCLLIQALIIEAFAISAY-----NVYIPHADDFARKITENVVKDEYLHLNFGEQWLKANFESAKDE-LERANRENLAIVWRMLDEVAGDALVLGME--------KEALMEDFTIAYQEALQNIGFSTRETLRMLTAGLAAAA.......................................................................................................................................................................... 258
20 -31.3004mud_A mol:protein length:235 Ring oxydation complex/ phenylacetic acid degradation related protein  ali model follow..  11  3............................................................................QKLRSVKEVPQDLTNTLVNIIELRADFELAMVEQYSPWLVNAPTVDSRLFVAKLVSDELNHGWQLVRLLEEFKVKDVIERISNARL---------GIHKLEVSNLPLFNWEDVIAFTFLVDGAGLYQL-----KILKDCSFEPLSTLASSMIKEEESHIFFSQNELRNYQNKNR---MQGAINFWFPRAVEMLHMTWSLNETHLRDLNISDLTKND-LINGYIKTTNEELKKCGYNEVN....................................................................................................................................................................................... 223
21 -30.6005uxg_A mol:protein length:220 aldehyde deformylating oxygenase  ali model follow..  10  6..................................................................................FSTPQEIREGIKYLSAHFYPASIMDRWKILKKLSFEKAKIIANYSLQQVIEEIEHFDFFNEYFKEDPLTTVRLPPSYIKL---------FDGLVEDFQSSRWRENIATRFHMITEGVLATVGLKILNETSRKYNLLKFNEGIKRIIEDEARHVSFGLSLIEDKEYAVKR------VEELFPLAVQIVKEGKDKIEPLGYSI--------QELVNLMEELKKARINKI............................................................................................................................................................................................. 209
22 -30.4005k53_A mol:protein length:262 aldehyde deformylating oxygenase  ali model follow..  12  37..................................................................................DFQTETYKDAYSRINAIVIEGEQEAHDNYLTLAELLA--DKKAELVGLSKMENRHMKGFQACGRNLKVTPDMA--------FAKQFFSELHKNFQTAAAQGQIVTCLLIQSLIIECFAIAAY-----NIYIPVADDFARKITEGVVKEEYSHLNFGEVWLQAHFEE-SKAELEAANRQNLPIIWKLLNAVADDARVLGME--------KDALIEDFMIAYGEALGNIGFNNRDIMRMSAQGL.............................................................................................................................................................................. 254
23 -30.3003pvr_A mol:protein length:311 Phenylacetic acid degradation protein paaA  ali model follow..  12  1............................................................MRSTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDG-------MKYSSIFNYPTLS---------ADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFG-----------------EIDWQEFNEVINGRGICNQERLDAKRKAWEEGT...................................................................................................................... 292
24 -30.2004iit_A mol:protein length:320 Phenylacetate-CoA oxygenase subunit PaaA  ali model follow..  11  4............................................................SGSTEEQRFDQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDLYQKMLDGQMK------YSSIFNY--PTLSWAD-IGVIGWLVDGAAIVNQ-----VALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQEAQRQMLQDAINRFWWPALMMFGPNDDNSPNSARSMAKIKLHSNDELRQRFVDNTVPQVEILGMTVPDPDLQFDEASGHYRFGEID-------NEVISGRGICNHERLAAKRKAWEEWVR------EAALAHAQKQQARSAA............................................................................................................. 314
25 -26.9003ee4_A mol:protein length:323 Probable ribonucleoside-diphosphate reductase  ali model follow..  11  2AGMTRTRSGSLAAGGLNWA-------SLPLKLFAGGNA---KFWHPAD------------------------IDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEADEMYLTQFAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSQVRASVTYNHIVEGMLALTGYYAWHKICVERA-PGMQELVRRIGDDERRHMAWGTFTCRRHVAADDATVFETRMNELIPLALRLIEEGFALYGDQPPFDLS-----KDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYS............................................................................................................................................................................. 296
26 -26.7004hr0_A mol:protein length:316 Ribonuleotide reductase small subunit  ali model follow..  11  1...MAVDDDDKMVHHDGFQTVKATIDWEHPMFKLYEKAKRNGKWNPAD------------------------IDFSQDQKDFASLTSEEKISALPLVAGFSAGEEAVTLDILPMAHALARQEDVLFLTTFMHDEAKHVEMFSRWQQAVGIGQMDLSVFHNDH-YKRIFYEALPEAMNRLYADDSVIRAATVYNMIVEGTLAESGYYTFRQIYKKAG-PGLLQGIDYLNMDEGRHIQFGIYTIQRIVNEDERELFIRYMDELWPHVIGYVDYLTELGKRQQQLARTYALEIDDLLRHYVIKQFNLRKKQISRTKRVDVVEGLEKTA............................................................................................................................................................................. 307
27 -26.3003pvr_B mol:protein length:259 Phenylacetic acid degradation protein paaC  ali model follow..  10  1....................................................................................MGSSGSNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGD----EDTLAFTRDERQFSNLLLVE--QPNGNF------ADTIARQYFIDAWHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGVSGQKMQQAINKLWRFTAELFDA-----EIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRTGGKKGLHTEHLGPML----------------AEMQYLQRVLPGW..................................................................................................................................... 253
28 -24.4004iit_C mol:protein length:251 Phenylacetate-CoA oxygenase subunit PaaC  ali model follow..  12  2.......................................................................................NNPNPVATYALRLGDNGLVLAQRLGAWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELNGCGDEDTLAFGRDERQYSNLLLVEQPNGN-------------ADTIARQFFIDVWHVALYSRLVNSRDAQLAAIAAKGLKEVRYHLRFSRGWLERLGNELSNRKMQQAVDNLWRFTGELFLA-----EVELSLVEQGIAVDPRELQAEWQSAVHTALLDSGLQIPQEAAFRSGGKQGLHSEHLGPLL----------------AEMQYLQRSHPGW..................................................................................................................................... 251
29 -24.1003per_A mol:protein length:481 Benzoyl-CoA oxygenase component B  ali model follow..  11  21..QRALEQWQPSF--LNWWDDMGPENSSNYDVYRTAVSVDPKGWADFGYVKMHDYRWGIFLAPQEGEKKIT-FGEHKGQDVWQEVPGEYRSTLRRIIVTQGDTEPASVEQQRHLGLTAPSLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREE--GEALLERRSGDEDNPRILTAFNEKTPDWLSFFMFTFITD----RDGKFQLASLAESAFDP-LARTCKFMLTEEAHHLFVGESGIARVIQRTCEPTLQKYLNFHYSVTSDLYGAEISSNAATYYT-NGLKGRFEEEKIGDDHKLQNSEYEVMDVAGDKILTRHVPALSALNERLR---WITDVQAGVDRWNRIPAKFGFDFRFTLPGFHRKIGMFVSPDGRLISEAEWTHQHKNWLPTESDRLYVSLMGRCLEPGKFANWIAAINNQPVNF--------------EYVRFNWSHPQFEK.......................................... 481
30 -23.5002uw2_A mol:protein length:332 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE M2 SUBUNIT  ali model follow..  12  2MTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEE------------------------VDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNELVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALP---------VKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENSFLDADF........................................................................................................................................ 332
31 -23.2003vpm_A mol:protein length:286 Ribonucleoside-diphosphate reductase subunit M2  ali model follow..  12  1MGVEDEPLLRENPRRFVIFP-------EYHDIWQMYKKAEASFWTAEA------------------------VDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNELVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALP---------VKLIGMNCTLMKQYIEFVADRLMLELGFSKV------------------------------------VENPFDFM............................................................................................................................................ 286
32 -22.5002vux_A mol:protein length:326 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B  ali model follow..  12  46...........................QYPDIWKMYKQAQASFWTAEE------------------------VDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNELVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALP---------VGLIGMNCILMKQYIEFVADRLLVELGFSKV-----------------------------------QAENPFDFMEN.......................................................................................................................................... 312
33 -22.0002o1z_A mol:protein length:311 Ribonucleotide Reductase Subunit R2  ali model follow..  13  46...........................LYPDVWDFYKKAEASFWTAEE------------------------IDLSSDLKDFEKLNDNEKHFIKHVLAFFAASDGIVLELASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWI-NDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLP---------CDLIGMNSRLMSQYIEFVADRLLECLGSPKI-----------------------------------HAKNPFNWMD........................................................................................................................................... 310
34 -21.3003hf1_A mol:protein length:351 Ribonucleoside-diphosphate reductase subunit M2 B  ali model follow..  11  48...........................QYPDIWKMYKQAQASFWTAEE------------------------VDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLI---------GMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDNVFLDADF........................................................................................................................................ 351
35 -20.8002p1i_A mol:protein length:349 Ribonucleotide reductase, small chain  ali model follow..  12  47...........................MYPEVWNFYKKAEASFWTAEE------------------------IDLSSDLKDFEKLNVNEKHFIKHVLAFFAASDIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWI-NDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPCDLI---------GMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQKSGVMAQRKEQVFLNTDF........................................................................................................................................ 349
36 -20.5001h0n_A mol:protein length:390 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE  ali model follow..  11  87...........................EYHDIWQMYKKAEASFWTAEE------------------------VDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNELVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTEALP---------VKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSNSTENSFLDADF........................................................................................................................................ 390
37 -20.5006cwo_A mol:protein length:344 Ribonucleotide reductase  ali model follow..  11  28...........................EYPEVLQFTEAINKAYW----VHTEVDFTA-------------------DTQDFHAHLSLAEKTAVKNSLLAIAQIEVAVKSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYN------DEFEKLLDVPVIRRRVDYLSNVLKNRKYMVSLILFSILIENVSLFSQFAILLSFTRFKG-KNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIA-VESDILDWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKA-------------------WFEEEVFANSLDDFFAKRYTTANDLF................................................................................................................................. 338
38 -20.2004d8f_A mol:protein length:366 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  10  49...........................KYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS----------------------DRLSEDERRVILLNLGFFSTAELVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRA--SMFIDYVQHIADRRLERIGLKPIYHTKNPFP---------------------WMSETIDLNKEKNFFETRVIEYQHAASLTW............................................................................................................................. 360
39 -20.1002rcc_A mol:protein length:346 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  13  37...........................RFSWAYPLYKNMLANFWTPFE------------------------INMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDYSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYW--KHDDVLKERNEFIIDGYEKFV-FLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGINP--EDMETYISFIANKRAVQLGMEKPYPEIKHN------------------PMKWIRAYEDVNSGKSDFFEQKY........................................................................................................................................ 334
40 -20.1002jcd_A mol:protein length:345 N-OXIDASE  ali model follow..  9  1ISEFDSGETMREEQPHLATTWAARGWVEEEGIGSATLGRLVRAWPRRAAVVNKADILDEWADYDTLVPDYLEIVPFAEHPLFLAAEPHQRQRVLTYNERVIATEQLIALVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRK----SERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCINALLALLARDATI---QPMHSLITTLHLRDETAHGSIVVEVVRELYARMNERCLPIALEAFAEQDLSALLLELNAIRGAEEIVGDLRSTAGGTRLVRDFSGARKMVEQLGLDDAVDFDFPER................................................................................................................................................................................ 336
41 -20.0001jk0_B mol:protein length:345 ribonucleoside-diphosphate reductase small chain 2  ali model follow..  8  41...........................KYHEIWAAYKKVEASFWTAEE------------------------IELAKDTEDFQKLTDDQKTYIGNLLALSISSDNLVNKYLINFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKD-PKNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNSLP---------VEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVSDYQKASDMSKSATPS-FDDDF........................................................................................................................................ 345
42 -20.0001jk0_A mol:protein length:419 ribonucleoside-diphosphate reductase small chain 1  ali model follow..  11  106...........................KYHEIWQAYKRAEASFW----TAEEIDLSK-------------------DIHDWNNRMNENERFFISRVLAFFAASDGIVNELVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDALPVALLGMN---------ADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVSDYQKAGVMSKSTKQE-FNEDF........................................................................................................................................ 413
43 -19.1001pfr_A mol:protein length:340 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  11  32...........................KYDIFEKLIEKQLSFFWRPEE------------------------VDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIELKKKLYLCLMSVNALEAIRFYVAFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGL---------------------------------DLPFQTRSNPIPWINT.......................................................................................................................................... 337
44 -19.1004bmo_A mol:protein length:322 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA  ali model follow..  10  1......................................MRAVNWNKKEDDF--SLMFWKQNIAQFWTEEE--IAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDKQGGEGMPLVLVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDDNHPLLEKKAGIITSYYRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLYLAGQGKLTASGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS------GLVEDVNRFVRYNANKGLMNLGL--EPKFEEEEINPIVLNGLR------------------TDTKNHDFFSVKY........................................................................................................................................ 304
45 -18.8005hyg_A mol:protein length:317 Uncharacterized protein  ali model follow..  10  5.................................NAVINRLVGNWHR-RAAVKREEPDVYALFDPGRPDFREDMIPFRGHPIWERLSDETRSRLLSYNRNTVLIEQRIALVIGGAYPGLGGQQLELAVAQAMVDEQYHTLMHINGSAVTRRMRR---DFSDRVLPDSHITTIHQEHLDRCEEPWQRSLTTLGFATVAEISINAYLDLLADDQEI---QVVNSTTVKLHNRDEYCHASISGEMMKQVLPADRRRFLLEKVVAGL-----------------------------EAFVAPDFTTWESIVAFEGVPGW---EKAAAEVREAQGGTHLVQDHSGIHTLLTEMDVLDQVEFGWGTTV......................................................................................................................................... 307
46 -18.4001kgn_A mol:protein length:329 Ribonucleotide reductase protein R2F  ali model follow..  11  25...........................PDEKDLEVWDRLTGNFWLPEK------------------------IPVSNDIQSWNKMTPQEQLATMRVFTGLTLLDTIQGTVAISLLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWS--EENENLQRKAKIIMSYYNGDDPLKKKVA-STLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDDLGW-----TEDVKRFLRYNANKALNNLGYEGLFPTDETKVSPAILSSLS-------------------ADENHDFFSGSY........................................................................................................................................ 314
47 -18.2001za0_A mol:protein length:275 POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE)  ali model follow..  10  1MAQKPVAD--ALTLELE--------EANMTRHLDTEDIWFAHDYVPFDQGENFAFLGGRDWDPSQSTLPRTITDACEILLILKDNLAGHHRELVEHFIL--------------------EDWWGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVR-----------VQHVMKGYRAEKYTQVETLVYMAFYE----RCGAVFCRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIA------------AIAARAADLDVLGADIEAYRDKLQNVADPQLRQLISDRITAWGLAGEPSLKQFV................................................................................................................................................................................. 273
48 -18.1003n37_A mol:protein length:319 Ribonucleoside-diphosphate reductase 2 subunit beta  ali model follow..  10  2..................................KLSRISAINWNKISDDK--DLEVWNRLTSNFWLPEK--VPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWS--EENAPLQRKAQIIQQHYRGDDPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPW-----ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVN------------------AILAALSPNADENHDFFSGSY........................................................................................................................................ 304
49 -18.0001mrr_A mol:protein length:375 RIBONUCLEOTIDE REDUCTASE R1 PROTEIN  ali model follow..  11  32...........................KYDIFEKLIEKQLSFFWRPEE------------------------VDVSRDRIDYQALPEHEKHIFISNLKYQTLLDIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRS--------------------PIPWINTWLVSDNVQVAPQEVEY........................................................................................................................................ 356
50 -18.0004n83_A mol:protein length:319 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  10  14...........................EDVIDKSTWEKLTEQFWLDTR------------------------IPLSNDLDDWRKLSHKEKDLVGKVFGGLTLLDLQSESGVDALRKDVRTAHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIDEIFAWT--NTNPYLQKKAEIINEIYLNGTALEKKIA-SVFLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYD-----TVGWTEEVKTFLRYNANKALMNLGQDPLFPDSADD------------------VNPIVMNGISTGTSNHDFFSQVY........................................................................................................................................ 302
51 -17.9001uzr_A mol:protein length:296 RIBONUCLEOTIDE REDUCTASE R2-2 SMALL SUBUNIT  ali model follow..  10  20...........................QDEKDAEVWDRLTGNFWLPEK------------------------VPVSNDIPSWGTLTAGEKQLTMRVFTGLTMLDIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWS--EENRNLQRKAEIVLQSYRGDEPLKRKVA-STLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDLYD-----EVGLTEDVKKFLRYNANKALMNLGYEA---------------------------------FPRDETDVNPAILS.......................................................................................................................................... 289
52 -17.9001pj0_A mol:protein length:375 Ribonucleoside-diphosphate reductase 1 beta chain  ali model follow..  11  32...........................KYDIFEKLIEKQLSFFFRPEE------------------------VDVSRDRIDYQALPEHEKHIFISNLKYQTLLEIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRS--------------------PIPWINTWLVSDNVQVAPQEVEY........................................................................................................................................ 356
53 -17.9001biq_A mol:protein length:375 PROTEIN R2 OF RIBONUCLEOTIDE REDUCTASE  ali model follow..  11  32...........................KYDIFEKLIEKQLSFFWRPEE------------------------VDVSRDRIDYQALPEHEKHIFISNLKYQTLLDIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIELKKKLYLCLMSVNALEAIRYYVSFACSFAFAERELMEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIKDILCQYVEYITNIRMQAVGLDLPFQTRS--------------------PIPWINTWLVSDNVQVAPQEVEY........................................................................................................................................ 356
54 -17.8001r2f_A mol:protein length:319 PROTEIN (RIBONUCLEOTIDE REDUCTASE R2)  ali model follow..  9  15...........................QDDKDLEVWNRLTSNFWLPEK------------------------VPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWS--EENPPLQRKAQIILAHYVSDEPLKKKIA-SVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGW-----VNDVKAFLCYNANKALMNLGYEALFPPEMADVN------------------AILAALSPNADENHDFFSGSY........................................................................................................................................ 304
55 -17.3006ebo_A mol:protein length:355 Ribonucleoside-diphosphate reductase, beta subunit  ali model follow..  9  1MGSSSSG---LVPRGSTKNYYDRSVSPVEYAYFDQSQNMRAINWNKIVDEK--DLEVWNRVTQNFWLPEN--IPVSNDLPSWNELDDDWQQLITRTFTGLTLLDVQSSIGDVAQIKNSLTEQEQVIYANFAFMVGVHARSYGTIFSTLCTSEQIEEAHEWV--VDNEALQARPKALIPFYTADDPLKSKIA-AALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPEKQAEMKQFVFDLLDKMIGLEKTYLHQLYD-----GFGLADEAIRFSLYNAGKFLQNLGYESPFTKEETRIA--------------------FAQLSARADENHDFFSGSYITLDEDW................................................................................................................................. 347
56 -17.0006gp2_A mol:protein length:345 Ribonucleoside-diphosphate reductase beta chain  ali model follow..  10  22..EYAQQGFKGKMRSVNWNV-------NDEKDLEVWNRITQNFWLPEK------------------------IPVSNDLTSWRTLTPEWQELITRTFTGLTLLDTIQATVDVAQVPNSLTDHEQVIYTNFAFMVAVHARSFGSIFSTLCSSEQIEEAHEWV--INTETLQERAKALIPYYVNDDPLKSKVA-AALMPGFLLYGGFYLPFYLSARGKLPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYELIDLEKAYLKELYE-----DFGLADDAIRFSVYNAGKFLQNLGYD.......................................................................................................................................................................................... 294
57 -16.4003ez0_A mol:protein length:225 uncharacterized protein with ferritin-like fold  ali model follow..  11  10......................................................................................ARYNRFVADLFGMMAYGELSAFERFSADARYSPTLHDRAVLGRIAVVEFRHYELVSARLEAMGIDAEDAMLPFQAAVDY----------FHSRTRPADWYESLMKAYVID-------VSADFYRAISRYVDAGTRDVIEQIQASD-ETTEVLRERLRSALADDPR---RRLLGEALTQAQRVSYEHAFLGSLIGGEDSAAAKELVSGLIAGLAEKHSKRMTQLGLTG......................................................................................................................................................................................... 225
58 -16.3004dr0_A mol:protein length:350 Ribonucleoside-diphosphate reductase subunit beta  ali model follow..  10  8LVPRGSHMMTKIYDAANWSK-------EDDFTQMFYNQNVKQFWLPEE------------------------IALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTET-FEWVKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYD-----QVGLSHDVKKFIRYNANKALMNLGFDPYFEEED--------------------INPIVLNGLNTKTKSHDFFSMKY........................................................................................................................................ 322
59 -15.4002uw1_A mol:protein length:338 PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE  ali model follow..  11  3VTHSMPPQKLEIFKSL---------DDWARNNVLIHLKSVEKSWQPQD-PDPVSDGFEEQVRELRERA--------------KEIPDDYFVVLVGDMIT----EEALPTYMSMLNRCAEPSAWAMWTRAWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSEN-----------SPYLGFIYTSFQERATFISHANTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMPAHLMYGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVCELGPKIRRL-EERAQGRAKEAPTMPFSWIFDR......................................................................................................................................... 334
60 -15.2004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  13  14.................................................................................IGEANPRFAQLLLEQFGG-ATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAVRGM-SQGNAWTASYLNEGGDVVRDLRANIAAE----AGARQTYEELIKLSPDEGTKQTLVHLLTREISHTQMFMKALDSLGKLTDPFFGNV.................................................................................................................................................................................................................................................. 188
61 -13.9001oq4_A mol:protein length:363 Acyl-[acyl-carrier protein] desaturase  ali model follow..  12  11..VENLKKPFMPPREVHVQVTHSMPPQKIEIFKSLDNWAE-ENILVHLKPVEKCWQPQDFLPDPASDGFDEQVRELRERA--KEIPDDYFVVLVGDMIT----EEALPTYQTMLNTLASPTSWAIWTRAWTAEENRHGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTEN-----------SPYLGFIYTSFQERATFISHGNTARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMR-RDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDYVCRLPPRIRRLEERAQ------------GRAKEAPTMPFSWIFDR......................................................................................................................................... 359
62 -13.7005olk_A mol:protein length:430 Ribonucleoside-diphosphate reductase, beta subunit 1  ali model follow..  11  146............................................................................DIQDFKTGLSEVERSAIKNTMLAISQIEVAVKTFWGDVHHRLPKPEIAAVGATFAESEVRHHDAYSHLLEILGLNEE-------KELKKKPVIMKRVHYLETSLKDREYTESILLFALFIEHVSLFSQFLIIMAFNKHKN-KGISNAVEATSKEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFE-AESKVVDWIFEKGELDFLPKAVINEFLKNRFNKSLEAIGLEK-DIDEALLQETEWFDDEI-------------------GTKHGDFFVKRYSTSDDLF................................................................................................................................. 430
63 -12.6003sid_A mol:protein length:180 Symerythrin  ali model follow..  16  2.........................................................GLNYNQEDFMGLDRFFQDAVS-------HNNTDANAASSIEVEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRL-------STIESQIDAVASDSRGLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALENLLE........................................................................................................................................................................................................................................................... 178
64 -12.4002fzf_A mol:protein length:175 hypothetical protein  ali model follow..  10  20...........................................................................................SLEELLGMAIKAEIGAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVARELEKVQD--------IIDLIRWAMKAEEIAAEF----YLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLNWEM........................................................................................................................................................................................................................................................ 166
65 -12.3004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  17  4...............................................................................SMAQLKGSKTEENLKYAFA----GESQANRRYLYFASKADVEGQNDIAALTAEGETGHAHGHLEYLEAVGDPATGLPFGTSRQNLQSAIAGETHEYTD--------------------------MYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDGLVD........................................................................................................................................................................................................................................................... 144
66 -11.9001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  20  1................................................................................MKDLKGTKTAENLKQGFI----GESMANRRYLYFAKRADEEGYPEIAGLIAEGETAHAFGHLDFIRQGGLTDPATDKPIGTL------------------------EQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQLKGGT......................................................................................................................................................................................................................................................... 144
67 -11.8001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  12  1.................................................................................MAGNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTGQA--------------------VPVIYESDADQEDATIEA-YSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHI............................................................................................................................................................................................................................................................. 146
68 -11.5003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  16  2...................................................................................QGDPDVLKLLNEQLTS----ELTAINQYFLHSKMQDNWGFTELAEHESFEEMRHAETITDRILLLDGLPNYQRLFSLRVGQT--------------------LREQFEADLAIEYEVLER-LKPGIVLCREKQDATSARLLEQILADEETHIDYLETQLQLMDKLGDALYAAQCVSR.............................................................................................................................................................................................................................................. 156
69 -11.4005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  15  2...................................................................................QGDPEVIEFLNEQLTA----ELTAINQYFLHAKLQDHKGWTKLAKYESFDEMRHAEVLTDRILLLDGLPNYQRLFHVRVGQS--------------------VTEMFQADREVELEAIDR-LRRGIEVMRAKHDITSANVFEAILADEEHHIDYLETQLDLIEKLGESLYLSTVIEQ.............................................................................................................................................................................................................................................. 156
70 -11.2003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  15  1....................................................................................MGMQGDPDVLRLLNEQLTSELTAIFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQT--------------------LREQFEADLAIEYDVLNR-LKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSR.............................................................................................................................................................................................................................................. 158
71 -11.2004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  16  2...................................................................................KGDQKVIEYLNRGLRS----ELTAVSQYWLHYRMLEDWGYKDLAKKESIEEMAHADKFVERILFLEGLPN------------------------DPLRIGQTVKEVLESDLAAEREARAL-YQEGAAYAASVGDFPSKNLFEELMGDEEHHIDFLETQLDLVSKLGLELYAQHHIGK.............................................................................................................................................................................................................................................. 156
72 -11.1002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  17  6...................................................................................QGDPDVLRLLNEQLTS----ELTAINQYFLHSKMQDNWGFTELAAHESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQT--------------------LREQFEADLAIEYDVLNR-LKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSR.............................................................................................................................................................................................................................................. 160
73 -11.1001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  14  2...................................................................................KGDAKVIEFLNAALR----SELTAISQYWVHFRLQEDWGLAKMAKKESIEEMGHADKIIARILFLEGHPNLQKLDPLRIGEG--------------------PRETLECDLAGEHDALKL-YREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDRLGPQGFALLNAAP.............................................................................................................................................................................................................................................. 156
74 -11.0003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  9  2...................................................................................QGDAKVIEYLNAALRS----ELTAVWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRIGQT--------------------LRETLDADLAAEHDARTL-YIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMGSIGEQNYGMLNAKP.............................................................................................................................................................................................................................................. 156
75 -10.9003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  16  2...................................................................................KGDTKVINYLNKLLGN----ELVAINQYFLHARMFKNWGLKRLNDVESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGED--------------------VEEMLRSDLALELDGAKN-LREAIGYADSVHDYVSRDMMIEILRDERGHIDWLRTELDLIQKMGLQNYLQAQIRE.............................................................................................................................................................................................................................................. 156
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Bourne PE, Allerston CK, Krebs W, Li W, Shindyalov IN, Godzik A.,Friedberg I, Liu T, Wild D, Hwang S, Ghahramani Z, Chen L, Westbrook J. The status of structural genomics defined through the analysis of current targets and structures. Pac Symp Biocomput. 2004;:375-86.