current user: public
If you have questions about the server, please let us know.

Query: 2a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .
# Score Template Links and tools%idFirst SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNLLast
1 -120.0002a1x_A mol:protein length:308 Phytanoyl-CoA dioxygenase  ali model  100  1SGTISSASFHPQQFQYTLDNNVLTLEQRKFYEENGFLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSVNLKDIWMFRARLVKGERTNL 308
2 -91.3005nch_A mol:protein length:268 Leucine hydroxylase  ali model follow..  12  2..................GRMQLTADQVEKYKSDGYVLLEGAFSPEEVHVMRQALKKDQEVQGP------------HRILEEDGRTVRALYASHTRQSVFDQLSRSDRLLGPATQLLECDLYIHQFKINTKRAFGGDSWAWHQDFIVWRDTDGLPAPRAVNVGVFLSDVTEFNGPVVFLSGSHQRGTVERKARETSDDYSMTPAELSQMVEKHPMVSPKAASGSVMLFHPEIIHGSAPNISPFARDLLIITYNDVANAPKPAGEPRPEYVIGR................................... 252
3 -90.6002opw_A mol:protein length:291 PHYHD1 protein  ali model follow..  17  2....................ACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTNKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDAS---FLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQ................................ 288
4 -90.5004xab_A mol:protein length:252 EvdO2  ali model follow..  17  1.............MDAMEVVGTIDHRDREEFRSRGFAILPQVASESEVAWLRQAYDRLFVRRATPGAEDFYDI--AGQRDREGPPLLPQIIKPEKYVPELLDSPHFARCRSIASAFLAEEELEFYGHAILKPPRYGAPTPWHQDEA---YMDPRWRRRGLSIWTTLDEATVESGCLHYLPGGHRGPVLPHHHIDNDDRIR---GLMTDDVDPTSAVACPLAPGGAVVHDFRTPHYAGPNLTDQPRRAYVLVFMSAPAEVADPEPRP.......................................... 247
5 -89.6003emr_A mol:protein length:310 EctD  ali model follow..  17  27..............RSKDNQAPITKEQLDSYEKNGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIRE--------PESNDIRSIFHVHQDDNYFQDVANDKRILDIVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDNNYKESLKKQRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSVKNRLVEPFSGGEK........................................ 282
6 -88.9004xaa_A mol:protein length:223 Putative oxygenase  ali model follow..  14  1................MTTATLDRAAAIERFRRDGFANAGPVLAPDAIARLKAGAERLITRFTDEGLRSDDYWNFPVEGDERPVLYRVHNLE-KQDWAPERDLLHREELAQLAAAFVDGPVVPTAYALVLKEPYRAAEVPWHRDRVNV------GPRTVCNLSICLDDAGPHNGCLEAVPGSHLLPDDAE---------------VAKVRATGPVVPVPVSQGDVVVHDVRLVHGSGPNANGSWRRTIVIEYADPAAPPAP............................................... 223
7 -88.7004mhr_A mol:protein length:314 Ectoine hydroxylase  ali model follow..  12  22.........DPVVHSEWTNDAPISARQAAAFDRDGYIVLEDIFSADEVAFLQKAAGNLLADPAALDADTIVTE--------PQSNEIRSIFEIHAQSPVMARLAADARLADVARFLLGDEVYIHQSRLNYKPGFKGREFYWHSDFETWHVEDGMPRMRALSMSVLLAENTPHNGPLMVIPGSHRTYLTCVGETPDDHYLSSLKESLAELAHRHGIVAPTGKPGTVILFDCNLMHGSNGNITPFPRANAFLVYNAVSNRLEKPFGVEKPRPWFLARRG............................... 290
8 -86.3002fct_A mol:protein length:313 syringomycin biosynthesis enzyme 2  ali model follow..  17  2..............SHMSKKFALTAEQRASFEKNGFIGPFDAYSPEEMKETWKRTRLRLLDRSAA---------AYQDLDAISGGTNIANYDRHLDDDFLASHICRPEICDRVESILGPNVLCWRTEFFPKYPGDEG-TDWHQADTFANASG-EEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDETKRMTYEPDANNSIDENWKPDEASAVPMQMKAGQFIIFWSTLMHASYPHESQEMRMGFASRYVPSFVHVYPDSDHIEEYGGRISLE------------------KYGAVQVIGDET.. 294
9 -86.1003gja_A mol:protein length:319 CytC3  ali model follow..  13  2............TTVSEQANFTFSPEEVARFERDGYIGPVKIFEPEEMTRRWNIIRRQLLDRSL------------AIYPDSNGKANISNYDRHLDIDLLAEHIMRPEIVDRVGSLIGRNLLCWRSEFFPKYQG-DEGTDWHQAATFAHATG-PAFIGTITVWTAFTHSTEQNGCLQLMPGTHTSMNYDESKGMDYDAYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTRMGFAARYVPTQVQVYPGTENLTEYGDGINLE------------------KYGAVLTSGVD... 295
10 -85.7005epa_A mol:protein length:279 SnoK  ali model follow..  19  2......ARSADPDPGGPTTAENLSKEAVRFYREQGYVHIPRVLSETEVTAFRAACEEVLEKEGREI-----------WGAGEDEVQVHYVAQAWQKHPELRSLVLHPEISGIALRLAGAPLRVYSSDILVKEPKRTLPTLVHDDET---GLPLNELSATLTAWIALTDVPVERGCMSYVPGSHLRAREDRQEHMTSFAEFRDLADVWPDYPWQPRVAVPVRAGDVVFHHCRTVHMAEANTSDSVRMAHGVVYMDADATYRPGVQDG.......................................... 247
11 -84.7005ep9_A mol:protein length:305 SnoN,Epimerase SnoN  ali model follow..  15  3RSADQETEPGVPADLPAESDPAALERLAARYRRDGYVHVPGVLDAGEVAEYLAEARRLLAHEESV------------RWGSGAGTVMDYVADAQLGSDTMRRLATHPRIAALAEYLAGSPLRLFKLEVLLKENDASVPTAPHHDA---FAFPFSTAGTALTAWVALVDVPVERGCMTFVPGSHLLPDPDTGDEPWAGAF------TRPGEIWMPRVTVPLRAGDCTFHHARTVHSAGANSTDEPRLSTSAVYMDATAAYRPTGIAFLDDLPGTGAD-PLREGAPLTGDRFPLLRRPQTRQ........ 283
12 -78.9004xbz_A mol:protein length:334 EvdO1  ali model follow..  12  16MSSVGDLRVVNRIAECDIRRTGLLPEHVTAFRRQGVLVVRGLLTPQELADVQEAGRALIDRAWSTRSME---DTVWTLEPDQPGAAPVRIEYVVDKARPIAMLAGHPLLLRIMEQLVGPNLIPTWDSMVFKTPAGAPRLAWHRDAGLYDNAVVTGAGRVIDAGIYLDPAP-EDNCVWCIPESNYWGDDRLTATADQLN--------ASEWDTTGAVPAVMQPGDLLLHNILTLHGAPAVVGKQ-RRVIYFEYRPAEVEWQLGPHSAEYIGLKQ................................... 276
13 -73.5002rdn_A mol:protein length:288 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II)/alpha-ketoglutarate dependent hydroxylase  ali model follow..  16  2....SHMTNVTGDYTDCTPLLGDRAALDSFYEEHGYLFLRNVLDRDLVKTVAEQMREGLVALGAADPHATLEELTIDSFES-------VDEVAMHDYVKYDAFWNNPSTIKVFEQVFGEPVFVFLSTTISEEPSFHYLTPFHQDGFYIGP-----NQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPEVSEDEHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLSMDTRVQPAKSHR................................................. 257
14 -71.9004xcb_A mol:protein length:261 oxidase/hydroxylase  ali model follow..  13  3..................MVPALTREQLYIFDTTGFLVIPGVFGSGEVESFRSELERLDTVD-------------------PGFPRTRRYPDLPAASPVFARLALDDRLLAPVRDVVNQPLRLLEGYGLRRTKDSLGDRQVGRDLSITHTYGKLYCPYVKALVYLSDIQSPEDGSFCYVQGSHKANFPLLRERAERGENTSLVD-----SGFPTLSDVFVRSGDVLLLNEALMHGTRRKLTEGDRLLTAFGYGPTFFTEWRELDAETADLRG.................................... 247
15 -71.6003nnf_A mol:protein length:344 CurA  ali model follow..  16  2.SSGVDLGTENLYFQSNAMNREQVEQLKQEYEEKGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKV--------TLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLMIMHNALFSVEPNHKG-LPWHVGVGSFSFTK--TEDFGASIWIPLDKITKEHGGMQYVSTKIFPGQFYYSVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPHKLRRAFVIRLVDYDTRVDEER............................................. 277
16 -66.4006EC3 Entity 1(prereleased)  ali follow..  15  226EIEVLHERTSAEVCDIVVVGRARLGAQIRRFREDGFVNAGPVFADDTIARLKAGAIDLISRFTEHGHVS---DDYWNYDVENEAPVLYRIHNLEKQDWAERELLFRPELAELAAAFVGSPVVPTAFALVLKEPKRAAGVPWHRDRANV------APHTVCNLSICLDTAGPENGCLEGVPGSHLLPDDID---------------VPEIRDGGPRVPVPSKVGDVIVHDVRLVHGSGPNPSDQWRRTIVIEFANPAISLPSLPS............................................ 465
17 -62.1005ybm_A mol:protein length:314 PrhA  ali model follow..  12  5SSGLVPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQEVDPAMEKIPVE-----------VTNNGNSNDRTKRFSKCVIASPTFRNIIESDLMHELCDRVFSKPGYHFNDNMVIEVQPGAPAQRLHRDQELYPWWGPAGPECVINFFCAVTPFTEENGATRLVPGSHLWPEFTQINERDC-----------PQFGKIETVPAIMQPGDCYLMSGKVIHGAGHNATTDRRRALALAIIRRELRPMQA.............................................. 253
18 -59.3005ybl_A mol:protein length:314 Multifunctional dioxygenase ausE  ali model follow..  14  5SSGLVPRGSHMPSRLQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQVQ-----------VTNDGNSNDRVKRFSKLVTTSPTFRHILENDLMHELLQRVFSKPGHFNDTMVIEVQPGAPAQ-RLHRDQELYPWWN-DAPECLVNFFCAVTPFTVENGATRLVPGSNRWPELTLINATDC-----------PQYGKIDSVPAIMQPGDCYMMSGKVIHGAGHNATSDQRRALAFSTIRRELRPVQA.............................................. 253
19 -59.0004nao_A mol:protein length:326 Putative oxygenase  ali model follow..  9  3GSGSMTSQHQEHTGTKRFSIQSDPVEIHRAIVEDGVAIIEGFLTPEQVQKLNKDVDAPLKADREQLKFKADKKDDPHFWLAD-PDHVARVHNLVDFSHCFRHEILNHELLHKICRTFEESGDYWLGYGAVIENGPGTEQKWHRDQPRYPL-GPDAPEGMLNFFTALTDFDAETGKTQYILGSNKRVELGEPD------------------ADHPIEYVGLKPGDTTIVSGKITHRGSDNRSDKMRRAMPIMIIPSILTPFD............................................... 250
20 -55.1005zm2_A mol:protein length:306 Dioxygenase andA  ali model follow..  11  4SSSGLVPRGSHMPPIRRVNASQGSDAAYQILQEDGCVIVEQVICPNIIAKISDDVNRVMDKATIGAKKGEQTHIINMHNRTIHMGDLVLTSKTYRD-----ELLNLPFAHEVLEKVFKKDYWLNMGNILNMLPGAEAQ-RPHRDDYLYPV-PATSPDLMINITFPLNEFRHDNGGTLLLPKSHTGPNADFYA------------------NAEDLPAAEMQVGDALIFTGKCVHGGGANRSDKPRIGLALAAQPGYLTPRES.............................................. 248
21 -54.8004y5s_A mol:protein length:315 Verruculogen synthase  ali model follow..  13  2....PEFTVDSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPK---------GERLLADKYPPHFKYVPNVATTCPTFRNVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAPFHRDDATHPLMPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTP-------------------ERDQAVLATMDPGDVLIVRQRVVHAGGGNRTGKPRRVVLAYFNSVQLTPFET.............................................. 238
22 -54.7005m0t_A mol:protein length:294 Alpha-ketoglutarate-dependent non-heme iron oxygenase EasH  ali model follow..  15  2....PTITETSKPTLRRIPRSAGDEAIFQVLQEDGVVVIEGFMSADQVRRFNGEIDPHMKQWEL----------GQKSYQESYLAGMRQLSSLPLFSKLFRDLMNDELLHGLCKRLFGPEYWLTTSSVLETEPGYHGQ-ELHREHDGIPICGRQSPESMLNFLTALTDFTAENGATRVLPGSHLWEDFS-----------------APPPKADTAIPAVMNPGDAVLFTGKTLHGAGKNNTDFLRRGFPLIMQSCQFTPVEASVALPRELVETMTPLAQKMVG......................... 260
23 -47.8005y7t_B mol:protein length:315 Iron/alpha-ketoglutarate-dependent dioxygenase asqJ  ali model follow..  14  1...MMTSKDHVKSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTK------DHPNHVLSTTTRLVNVLAPISKAYREDVLNSKVLHRICSDAFHDYWVLMGAVMELAPSNPAQ-PLHRDMRFSHYLKPDAPATSINFLVALSPFTAENGATHVILGSHKWQNLSN-------------------VSMDATVRALMNPGDALLITDSTIHCGGAETTTETRRLLTITMGISQLTPLES.............................................. 241
24 -36.8004rgk_A mol:protein length:418 Uncharacterized protein  ali model follow..  13  54....EGKNPVPQLHADDIINGKVTEEQKAQIKQRGCCAILGVFPQEKATAWNREIGDYLDRNNFVERLKNAAEDNYFGTLAASKPQIYGIYW----STPQVEARQDKRMQAVQIFLNNNRVVTYADRTRRRPPKSGSIERWRPEVREFPSPAVCSMFRTFQGWTALTPQRTHAGTLNVIPIANAM---DDLCGAAPGRALSASEQWHPLLMEAISPIPDLEAGDTVFWHCDVIHSVENHNGEFDSNVMYIAAAPWC.................................................... 365
25 -35.7002csg_A mol:protein length:424 putative cytoplasmic protein  ali model follow..  14  59....QGQPVWPIIPFSELAMGNISDATRAEVKRRGCAVIKGHFPREQALAWDQSMLDYLDKNHFDEVYKGPGDNFFGTLSASRPEIY-----PVYWSQAQMQARQSEEMALAQSFLNRDISIIYPDRIRRRPPGTTSKLGAHTDSGALERWLLPAYQQVFQGWTALSDMLPGQGLLHVVPIPEAMAYIDELCGVAPGRVLPISEQWHPLLMAALTSIPPLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC.................................................... 371
26 -34.5002dbi_A mol:protein length:461 Hypothetical protein ybiU  ali model follow..  14  96....QGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIY-----PIYWSQAQMQARQSEEMANAQSFLNRDVSVIYPDRIRRRPPGTTSGLGAHTDSGALERWLLPAYQRVFQGWTALSDMLPGQGLLHVVPIPEAM---DELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPENQQGWGNVMYIPAAPMC.................................................... 408
27 -29.9006AKZ Entity 1(prereleased)  ali follow..  13  54..AKIGPSYVPKCDFIDIKDNKLPQQVSELFKQRGCLMIENVIDVDRIDIWFNELVEFCKTH---------------PETAGYTFPNPTSWYNVFWSKPQTEARFHPNMKAIFKAMSKDTQLVYGDRIRIREPGKAAALPLHLDSSSIERWEDIMYSEVLQGWLALSNNKSGEGTLRVLPSLKLS---PKFPGTVPGTGQLFLDKFYPHLHQGIISIPDVKKGSFVFWHCDLPHEVDRHNGNGHSSVLYYGQTPLS.................................................... 378
28 -23.3005iqs_A mol:protein length:315 WelO5  ali model follow..  9  16QGSMSNNTVSTKPALHFLDINATEVKKYPT-RSFDGMIIRGVFPRDTMEQVARCLEEGNDGGMKSILNKNEEQIYGHAIVGQSPDLKDYFASSAIFRQACRTMFQGEQVESIFHSLSGLPVEIPTGPATIRLLLEGREIAVHVGNDFLLMKTLLDLSDQLSYFIPLTVPE-AGGELVVYSLEWNP---QEASKYAQMQEYMDDVEFKIKSNQSQSVAYAPGPGDMLLFNGRYYHRVSEVIGNSPRRTIGGFL........................................................ 295
29 -19.9005v1b_A mol:protein length:240 Egl nine homolog 2  ali model follow..  11  4...........EEALPSAPERLALDYIVPCMRYYGICVVDSFLGAALGGRVLAEVEALKRGGRLRDGQLVSQRAIPPRSIRGDQIAWVEGHEPGCRSIGALMAHVDAVIRHCAGRLGSYKINGRTKAMVACYPGNGLGYVRHVDNP-------HGDGRCITCIYYLNQDVKVHGGLLQIFPEGR----------------------------PVVANIEPLFDRLLIFDRRNPHEVKP--AYATRYAITVWYFDADERARAKDKYQLASGQKGVQVPVSQ............................ 239
30 -19.7002g19_A mol:protein length:244 Egl nine homolog 1  ali model follow..  13  1........MPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP-------NGDGRCVTCIYYLNKDAKVSGGILRI----------------------------FPEGKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDAD.................................................... 215
31 -18.9006ey1_A mol:protein length:257 HIF prolyl hydroxylase  ali model follow..  11  25....DKTGLALEKTWQLQKNERLSNMVVNQLNTNGFCIINNFLGSSCSTEVLQQVLNLYQSGVFSNGQLARNVSVNRIRGDKIAWIGGDERGCEAIKYLSSCV---DSLISRCNGRLGNMITGRTKCMVACYPGSGLGYIRHIDNP-------NRDGRCVTVLYYLNPNSQDCGGQLWLYPNNE----------------------------NKVVKIDPIFDRLLLFDRRNPHEVKP--AYAMRYAITLWYFDEKERALSSQNGT.......................................... 251
32 -18.7005lbc_A mol:protein length:252 Egl nine homolog 1  ali model follow..  15  1....GSHMASPNGQTKPLPALKLALEYIPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLVLHCNGKLGSYKVNGRTKAMVACYPGNGTGYVRHVDNP-------NGDGRCVTCIYYLNKDAKVSGGILRI----------------------------FPEGKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDAD.................................................... 220
33 -18.6002hbt_A mol:protein length:247 Egl nine homolog 1  ali model follow..  13  7....................KLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP-------NGDGRCVTCIYYLNKDAKVSGGILRI----------------------------FPEGKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDAD.................................................... 209
34 -18.6004kbz_A mol:protein length:238 Egl nine homolog 1  ali model follow..  13  2...........SQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP-------NGDGRCVTCIYYLNKDAKVSGGILRI----------------------------FPEGKAQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDAD.................................................... 213
35 -18.5004iw3_A mol:protein length:229 Putative uncharacterized protein  ali model follow..  9  3SSSSGLVPRGSHMASHISPEHPMLAAVVDDLATHGWSQQAHFLPADLVRALAAECRRR--DAEGELNPAGVGRGATQEVRETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPP--GAFYRRHLDRFR------DDDRRMVSAVLYLNEQPHDGGQLRMFL------------------------------ADGVEHDVEPVAGCLVVFLSEVPHEVLP--AGRERLSLTGWFRRRGNDPF................................................ 223
36 -18.4002y33_A mol:protein length:252 EGL NINE HOMOLOG 1  ali model follow..  13  2....SHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNP-------NGDGRCVTCIYYLNKDAKVSGGILRIFPEGK----------------------------AQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDAD.................................................... 220
37 -18.3003w20_A mol:protein length:273 Putative uncharacterized protein  ali model follow..  8  11............RFGTAARAEHMTIAAAIHAADEADAIVMDIVPDGERDAWWDDEGFSSSPFTKNAHHAGIVATSVTLGQEQGDKLVSKAAEYFGIACRVNDGLRTTRFVRLFSDALDAKPLTIGHD-VYEPFEAPFNFAPHCDDDTVNWPLKRSFPRQLGGFLTIQGAD-NDAGMVMWD--------ESRAALDEMHAEYRETGAIAALERAAKIMLKPQPGQLTLFQSKNLHAIERCTSTRRTMGLFLIHTEDGWRMFD............................................... 273
38 -18.1003dkq_A mol:protein length:243 PKHD-type hydroxylase Sbal_3634  ali model follow..  10  1......................MGSDKIENLYFQGLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIM-----------DRLLAHPQFVSAALPLQFYPPLFNR--QGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVI-------------------------------QDTYGQQSIKLSAGSLVLYPSSSLHQVTP-VLSGERTAAF........................................................... 184
39 -18.0005l9v_A mol:protein length:252 Egl nine homolog 1  ali model follow..  13  1....GSHMASPNGQTKPLPALKLALEYIPAMNKHGICVVDDFLGKETGQQIGDEVRAL--HDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSDDLICHCNGKLGSKINGRTKAMVACYPGNGTGYVRHVDNC-------NGDGRCVTCIYYLNKDAKVSGGILRIFPEGK----------------------------AQFADIEPKFDRLLFFDRRNPHEVQP--AYATRYAITVWYFDADE................................................... 221
40 -16.8003mgu_A mol:protein length:644 PKHD-type hydroxylase TPA1  ali model follow..  10  13ERNSKQISLEEDKIKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK---LRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVIG------SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ.................................................... 249
41 -16.6002rg4_A mol:protein length:216 Uncharacterized protein  ali model follow..  10  1......................MSLAQIKSLFAT---LYHAPLSEHGPALDPAEFAASCYSIAE-------------DDDAGQEWCEREGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFELDGKA---------------------RLEDIWINILPEGGVHSGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMNMAEEDRISVSFNYAWGEG................................................... 210
42 -16.5004nhk_A mol:protein length:647 PKHD-type hydroxylase TPA1  ali model follow..  10  10ENLYFQSMLEEDKIKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK---LRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVIG------SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ.................................................... 246
43 -16.2003kt1_A mol:protein length:633 PKHD-type hydroxylase TPA1  ali model follow..  10  1.......MLEEDKIKGMFNPKIWDKTFQDGLKKENWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPNLFK---LRQILYSKQYRDFFGYVTKGKLSGSKTDMSINTYTKGCHLLTHDDVIG------SRRISFILYLPDPDRKSHYGGGLRLFPSILP-----------------------NVPHSDPSAKLVPQFNQIAFFPGFSFHDVEEVKVDKHRLSIQGWYHIPQ.................................................... 230
44 -15.9003bvc_A mol:protein length:212 Uncharacterized protein Ism_01780  ali model follow..  10  10.....................................LYHAPLSDHGPAIDAEEMESSCYAIAE-------------DDEAGQGWCEENGYPGYTSYASLTDLPWRFPIFADLVKSLDAHVAAFAEDLEFDLDGRA---------------------ELEDLWINILPEGGSHSGTTYVSMPGGTSALKLEDPRHAMMMAAPARRKTARDELRQFIYVTPAVGDVLLWESWLRHEVPMNMSEDDRISVSFNYRWAE.................................................... 205
45 -14.8006ax6_A mol:protein length:235 Procollagen lysyl hydroxylase and glycosyltransferase  ali model follow..  8  13SVPTEVTLYDLPTRKEEWEKKYLHPEFLSHLQNF--VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDPRIGGVESYPTQ--------------DTQLYEVGLDKQWHYVVFNYVAPFVRINLAFVVKYDMERQSELAPHHDSSTYT----------LNIALNEYGKEYTAGGCEF--------------------------------IRHKFIWQGQKVGYATIHAGKLYHRALP-ITSGKRYILVS.......................................................... 226
46 -14.1004nj4_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  9  16.........SMPERSDYEEQQLQKEEEARKV--KSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPEWVHQLVIQKLVEHRVIPENSAVINDYQPGGCIVSHVDPIH--------ERPIVSVSFFSDSA------LCF----------------------GCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDAPRL................................................ 244
47 -13.8004lt5_A mol:protein length:327 Naegleria Tet-like dioxygenase  ali model follow..  14  63LQNLLSKCKTTFQQSFTNANITLKDEKWLVCDHDGSVELPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSVTADLSQELGQYLSEIVNPQINYYISKLLTSSRTINYLVSLNDSYYALNNCLSLKPSNDGHRIRKPHKDNLDITP----------SSLFYFGNFQNTEGYLEL---------------------------------TDKNCKVFVQPGDVLFFKGNEYHVVAN--TSGWRIGLV-YFAHKGS................................................... 300
48 -12.8001e5r_A mol:protein length:290 PROLINE OXIDASE  ali model follow..  11  12..............................................DQTRLAPDLAYLAAVPTVEEEYDEFSNLWNASGDSEDRLYRDLKDAAAQPTAHVEHV---PYLKEIVTTVFDGTHL--QMARSRNLK--NAIVIPHRDFVELD----REVDRYFRTFMVL---EDSPLAFHSNEDT----------------------------------VIHMRPGEIWFLDAATVH-SAVNFSEISRQSLCVDFAFDG.................................................... 179
49 -12.3004npl_A mol:protein length:250 RNA demethylase ALKBH5  ali model follow..  12  18.................................SG-IKQASIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKDDIPDWVHELVIDRLVTHGNSAVINDYQPGGCIVSHVDPIH--------ERPIVSVSFFSDSA------LCF----------------------GCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRADA................................................... 220
50 -12.2005c5t_A mol:protein length:228 Prolyl 4-hydroxylase  ali model follow..  10  17.....................GFETSDRPGVCDGKYYEKDGFLSDIECDVLINAAIKKGLIKSEVGGATENDPIKLDPKSRNSEQTWFMPGEHEVID----------KIQKKTREFLNSKKHCIDEDVQVARYKPGQYYYHHYDGDD-CDDACPKDQRLATLMVYLKAPEEGGGGETDFPTLK--------------------------------TKIKPKKGTSIFFYKETLHAGLP...................................................................... 205
51 -12.1004o61_A mol:protein length:222 RNA demethylase ALKBH5  ali model follow..  10  15.................................SG-IRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPEWVHQLVIQKLVEHRVIPENSAVINDYQPGGCIVSHVDPIH--------ERPIVSVSFFSDSA------LCF----------------------GCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYA-HCIRPQDIKERRAVIILRKTRLDAPRLET.............................................. 222
52 -11.7004p7w_A mol:protein length:292 L-proline cis-4-hydroxylase  ali model follow..  10  1......................MASWSHPQFEKGATTRILGVVQ--DQRRLTDDLAVLAKSNFSSEYSDFACGR-RNQSGKQEEQRVVVHETPALATPLGQSL---PYLNELLDNHFDRD-SIRYARIIRISE--NACIIPHRDYLELE-------GKFIRVHLVL---DTNEKCSNTEENN----------------------------------IFHMGRGEIWFLDASLPH-SAGCFSPTPRLHLVVDIEGTR.................................................... 187
53 -11.6003lag_A mol:protein length:98 uncharacterized protein RPA4178  ali model follow..  10  10...................................................................................................................................................................IQIDNDEVRVTEWRLPPGSATG----HTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQH-DVRNESTAEIVFLEIELKAGS.................................................... 98
54 -11.2002jij_A mol:protein length:233 PROLYL-4 HYDROXYLASE  ali model follow..  14  10.....................EEWRGEVVHLSWSPRAFLKNFLSDEECDYIVEKARPKMVK-------SSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLENHEGLQVLH--------HDGQKYEPHYDYDPVNAGPEHGGQRVVTMLMYLTTV--EEGGETVLPNAEQKVTGDGWSECAKRG-----------------LAVKPIKGDALMFDPASLHGSCP...................................................................... 205
55 -11.2005eqn_A mol:protein length:359 FrbJ  ali model follow..  7  61EQGLTVWDLDRKAVPLERAGKLVAQCVEQLEHGFGLAMLRGVLTVAESQVVMGVVGLHLGTAVAQNGHGDRVVSIRDYGKGRLNSKTIRGYQTNESLPWHSDAPDIAALLCLTQAKHGGEFHVASAMHIYNTLLQEAPELLGLYYAGVFFDYRGEEPPGEPPAYRNAIFGYHNG-CRYFLRNFADSGTAKLGFEQPEVEKLALDTFEEIASRPEHVSMRLEPGDMQLVDDVTVHRDEEDGSTDSSRHLLRLWINVE.................................................... 329
56 -11.2004nhx_A mol:protein length:562 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1  ali model follow..  10  23PGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEALHCVIPNFIQSQDFEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKIL--------------FEDFRSWLSDISKIDLE--TIDMSCAKYEFTDALLCHDDEL---------EGRRIAFILYLVPDRSMGGTLDLYSIDEHFQ------------------------PKQIVKSLIPSWNKLVFFSPVSFHQSEVLSEEKSRLSISGWFHGPS.................................................... 255
57 -11.0003khb_A mol:protein length:219 Alpha-ketoglutarate-dependent dioxygenase alkB  ali model follow..  10  1.......................GPHMLDLFADAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLSLHQDK---------------------DEPDLRAPIVSVSLGLPAIFQFGGLK------------------RNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK.................................................... 218
58 -10.9002fd8_A mol:protein length:211 Alkylated DNA repair protein alkB  ali model follow..  11  1...........................MQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLSLHQDK---------------------DEPDLRAPIVSVSLGLPAIFQFGGLK------------------RNDPLKRLLLEHGDVVVWGGLFYHGIQPLKAGDCRYNLTFRQAGKKEN.................................................. 207
59 -10.8001vrb_A mol:protein length:342 Putative asparaginyl hydroxylase  ali model follow..  9  6.........IMSAVTESVLESIISPVTMSEFLEEYWLVARGIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLLRLPAGTSSKAIVYAAKN-GGGFKAHFDAYTNLIFQIQGEKT----WKLAKNENVSN------PMQHYD----SEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHST---KSDQATLALNITFGQPA.................................................... 249
60 -10.4004nig_A mol:protein length:205 Alpha-ketoglutarate-dependent dioxygenase AlkB  ali model follow..  11  5................................AAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGDACLINRYAPGAKLCLHQDKIHPDL-----RAPIVSVSL---------GLPAIF-------------------------QFGGLKRNDPLKRLLLEHGDVVVWGGESYHGIQPLKAGDCRYNLTFRQAGKK.................................................... 204
61 -10.3002xdv_A mol:protein length:442 MYC-INDUCED NUCLEAR ANTIGEN  ali model follow..  11  1SMAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWLLIQSLFKLTDLKSLCSR-GRDVNVCRCVNGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLV---GSNVYITPAGSQG-LPPHYDDVE----------------FILQ-----------LEGEKHWRLYHPTVP-----LAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNS................................................... 240
62 -10.1001jr7_A mol:protein length:311 HYPOTHETICAL 37.4 KDA PROTEIN IN ILEY-GABD INTERGENIC REGION  ali model follow..  8  1GQDYSGFTLTPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRNQLQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATA------VAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTY------VEEITDYVLMMKIDEQNMQGGNSLLLHGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQRGYFAYAS.................................................. 304
63 -10.1004qkb_A mol:protein length:200 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial  ali model follow..  9  6.......................SGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASM------------------AIMRRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDSIKFC------GATIAGLSLL----------------------------------SPSVMRLVHTQEPGEWLELLLEPGSLYILRGSASHEILRDEESGRRISVICRSLPEGM................................................... 194
64 -10.1005iax_A mol:protein length:226 Procollagen-Proline Dioxygenase  ali model follow..  13  27.....................EDREIQIISKFEEPLIVVGNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGAFLDDNELT-------------------AKIEKRISSIMNVPASHGEGLHILN--EVDQQYKAHYDYFA-EHSRSAANNRISTLVMYLNDV--EEGGETFFPKLN--------------------------------LSVHPRKGMAVYFNELTLHGGAP...................................................................... 198
65 -10.1006alm_A mol:protein length:394 Alpha-ketoglutarate-dependent L-arginine hydroxylase  ali model follow..  9  27GSEFMTESPTTHHGAAPPDSVATPVRPWSEFR----------LTPAEAAAAAALAARCAQRYDETDGPEFLLDAPVIAHELPRRLRTFMARARLDAWPHALVVRGNPFLLMLYAGLLGDVFGWATQQ--LVSSSSRQELGWHTEDAFSPYRA-VATTLAGVPLDDLDERTLDPEPVAILTGHRAAPHLRVDGAEGDEEAAAALGTLRKLID-ASLYELVLDQGDVAFIDNRAVHGRRAPRYDGRDRWLKRINITRD.................................................... 370
66 -10.1002r6s_A mol:protein length:325 Gab protein  ali model follow..  7  80....................QPLLLKTLLNRAEGALLINAVGAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVD----QQGRPVM---RYIDQFVQPKDFEEGVWLSELSDAIE---TSKGILSVPVPVGKFLLINNFWLHGRDRPHPDLRRELMRQR......................................................... 311
67 -9.8902iuw_A mol:protein length:238 ALKYLATED REPAIR PROTEIN ALKB HOMOLOG 3  ali model follow..  9  2.GSSSSGLVPRGSHMRVIDREGVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLR--TLKNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDE-----SLGRCPIIASLSF----------------GATRTFEMRKKPPPEENG----------DYTYVERVKIPLDHGTLLIMEGATQHRVPKEHSREPRVNLTFRTVYPD.................................................... 226
68 -9.6201drt_A mol:protein length:324 CLAVAMINATE SYNTHASE 1  ali model follow..  10  1......................................MTSVDCTAYGPELRALAARLPRTPRADLYAFLDAAHTAAASLPGALATALDTFNAEGSEDGHLLLRGLPAMLGLVGRRLGLDVYPSPGAHHLSSETSETLLEFHTEMAYHRLQP--AATLVASVRKALPLLDERT--VKPLYGDADDPFLGYDRELLAPEDPADKEAVAALSKDEVTEAVYLEPGDLLIVDNRTTHARTPRWDGKDRWLHRVYIRTDRNGQLSGGERAGDVVAFTPRG................................ 324
69 -9.4205cu1_A mol:protein length:212 DMSP lyase  ali model follow..  8  1..........................................MSSGSMTQTDPAFQNLLAEFQALHAREPALAGFVALPDSLTPQPVTPVRIPPAALMESDPDLTTTAYAAIRDAFIA----------------AGAVAQWRLTYQG-DFMDRFACYCLIGEGGPFASDSLAAYVVYMPAGLY-----FHQHPAEEIYFILAGEA---EFLMEGHPPRRLGPGDHVFHPSGHPHATRTYDRP.................................................................. 182
70 -9.4006daw_A mol:protein length:342 Non-heme iron hydroxylase  ali model follow..  10  62.........................RRFRTAEEASCLVVRGLVDDRRLGPTPLDWREPPREPESEVH---------------------------------------EVFLTLATAHLGDDVLPVPSHENDQSGHGTVELAWHTEDGFHPYRCLRNHDAVPTGVAGVDQVQDEPEPCAVLFGHPDRPYLRIDPLPGDPEAAAALEALTAELQRN-LTDVVLSPGDLLVINYRVVHGRAAARFDGTDRWLKKAVVTRD.................................................... 325
71 -9.3104csw_A mol:protein length:406 CUPIN 4 FAMILY PROTEIN  ali model follow..  12  1.....SSGLVPRGSHMQLPETILGGLAPEEFLANYWLLIRSPITPEELAGLACE-EGVTARLILEKGGAYPWEVRYGPFEPEDFVALPPTHWTLLVQEVDRLVPEVAALLETVRFVPNWRL---DDIMVSYAPEGGT-VGAHIDNYD--------------VFLV-------------AWGRRRWQINH---RPVEREELVPGLEVRLLAHFEPDAEWILEPGDVLYLPPRIPHYG---VALEDCMTFSIGFRAPD.................................................... 225
72 -9.2105apa_A mol:protein length:220 ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE  ali model follow..  9  23...........................VNGLKAQPWWTPKETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGSQFTLWQQGRRNENACKGAPKTCTLLEKFPETTGCRR----GQIKYSIMHPGTHVWPHTG----------PTNCRLRMHLGL--VIPKEGCKIRCANETK----------------------------------TWEEGKVLIFDDSFEHEV--QDASSFRLIFIVDVWHPELTPQQRR............................................. 209
73 -9.2002og5_A mol:protein length:357 Putative oxygenase  ali model follow..  11  33..........................................LDQSDAELVEEIAWKLATQATGRPDDAEWVEAARNAWHAWPATRDLAGFRRDSGPDGAIVLRGLPAVLLMTACGLGDDVVPVPGMEEFQGNAGSTLLTFHNENAFHEHRP--AGLRTACVRRVLPLLSDST--APVLLGDRSDPDLRVDLAATEPVTERAAEALRELQADATAVTHRLLPGELAIVNRVTVHGRTEPRYDGTDRWLQRTFVLTD.................................................... 328
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.