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Query: 2d5k_A mol:protein length:156 Dps family protein, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLSLELast
1 -78.5002d5k_A mol:protein length:156 Dps family protein  ali model  100  1MASNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLSLE 150
2 -74.5001n1q_A mol:protein length:149 DPS Protein  ali model follow..  48  3.TSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVNGPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADMLDAIEAGLEKHVWMLEAFLE.. 149
3 -74.0001jig_A mol:protein length:146 Dlp-2  ali model follow..  50  1..STKTNVVEVLNKQVANWNVLYVKLHNYHWYVTGPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADMLLAIHTTLEQHVWMLSAFLK.. 146
4 -73.0002c41_A mol:protein length:158 DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  30  5.TTLKEQVLTTLKREQANAVVMYLNYKKYHWLTYGPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVTPSSGQLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLYTRLVQTHQKHRWFLKEFLAKG 153
5 -73.0001ji5_A mol:protein length:142 Dlp-1  ali model follow..  51  1......QVIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFLN.. 142
6 -70.9003iq1_A mol:protein length:159 DPS family protein  ali model follow..  29  13.TTQSQKLANALNNLLANYQVFYMNTRGYHWNIQGKEFFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELAGETGDEGTSALMSDYIREQEKLVWMLNAWLK.. 159
7 -70.6003kwo_A mol:protein length:152 Putative bacterioferritin  ali model follow..  27  1..SNAMSVTKQLLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQGA 149
8 -70.4002chp_A mol:protein length:153 METALLOREGULATION DNA-BINDING STRESS PROTEIN  ali model follow..  44  7.KTNQTLVENSLNTQLSNWFLLYSKLHRFHWYVKGPHFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSASEMVQALVNDYKQISSESKFVIGLAEENQDNATADLFVGLIEEVEKQVWMLSSYLG.. 153
9 -69.6003ge4_A mol:protein length:173 DNA PROTECTION DURING STARVATION PROTEIN  ali model follow..  24  17.SNTKTTMIALLNENLAATIDLALITKQAHWNLKGPQFIAVHEMLDGFRAELDDHVDTIAERAVQIGGTAYGTTQVVVKESRLKPYPTDYAVHDHLVALIERYGDVANLVRKSIKDADDAGDDDTADIFTAASRSLDKALWFLEAHVQES 166
10 -69.4002vxx_A mol:protein length:192 STARVATION INDUCED DNA BINDING PROTEIN  ali model follow..  19  23.KATTTPICEGMNRLLASFQALYLQYQKHHFVVEGAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFTPEPEGFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGDRATAYLYDQILLKTEERAYHIGHFLAND 172
11 -69.4001moj_A mol:protein length:182 Dps-like ferritin  ali model follow..  26  24.ADRAEQCVDALNADLANVYVLYHQLKKHHWNVEGAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHMLREGLIELEDDAHHIEHYLEDD 173
12 -69.3001o9r_A mol:protein length:162 AGROBACTERIUM TUMEFACIENS DPS  ali model follow..  21  12.SNAKSTVIGILNESLASVIDLALVTKQAHWNLKGPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDYKIHDHLDALIERYGEVANMIRKAIDDSDEAGDPTTADIFTAASRDLDKSLWFLEAHVQEK 161
13 -69.2005lbh_A mol:protein length:145 CAIP  ali model follow..  32  2.....SKVVELLKQIQADASVFYVKVHNFHWNVKGMDFHPTHKATQEIYEQFADVFDDVAERVLQLGEMPYVTLADMLKAAKIKEESKTFCSKEIAQAVLADYEYFLKLFTELSAQADSQGDKVSAAYADDKVGELQKAIWMLKSQLA.. 145
14 -69.1005hjf_A mol:protein length:185 Ferritin, Dps family protein  ali model follow..  24  26.RSVTAPVTEGFNVVLASFQALYLQYQKHHFVVEGSEFYSLHEFFNESYNQVQDHIHEIGERLDGLGGVPVATFSKLAELTCFEQESEGYSSRQMVENDLAAEQAIIGVIRRQAAQAESLGDRGTRYLYEKILLKTEERAYHLSHFLAKD 175
15 -68.7002fjc_A mol:protein length:156 Antigen TpF1  ali model follow..  27  8.ARAIAAICEQLRQHVADLGVLYIKLHNYHWHIYGIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGIITDILRTLGKAIWMLGATLK.. 155
16 -68.6001qgh_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  42  3.TINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKA 153
17 -68.5001umn_A mol:protein length:165 DPS-LIKE PEROXIDE RESISTANCE PROTEIN  ali model follow..  31  12.RPSLADSKAVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLKEVLGDVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQA 162
18 -68.4002cf7_A mol:protein length:165 DPR  ali model follow..  31  12.RPSLADSKAVLNQAVADLSVAHSILHQVHWYMRGRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQ. 161
19 -68.3002iy4_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  41  3.TINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKTMDQLMEDLVGTLELLRDEYQQGIELTDKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKA 153
20 -68.2004a25_A mol:protein length:169 FERRITIN DPS FAMILY PROTEIN  ali model follow..  19  19.FDASSRLNAGLQEVLVDLTALHLQGKQAHWNIVGENWRDLHLQLDTLVEAARGFSDDVAERMRAVGGVPDARPQTVAASRIGDVGPDEIDTRACVEAIVALVRHTVDTIRRVHDPIDA-EDPASADLLHAITLELEKQAWMIGSENRSP 166
21 -67.8002bjy_A mol:protein length:156 NON-HEME IRON-CONTAINING FERRITIN  ali model follow..  40  3.TINSVDTKEFLNHQVANLNVFTVKIHQIGWYMRGHNFFTLGEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKA 153
22 -67.6004evd_A mol:protein length:164 Neutrophil-activating protein  ali model follow..  30  11.RGSHMKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA.. 158
23 -67.6002pyb_A mol:protein length:151 Neutrophil activating protein  ali model follow..  24  1..DDLDAIQLKLQELLASLHIFYSNLRGIHWNIKDTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFIKELDIESNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDYGTANIMDDIMSDLEKHLWMHKALLENC 150
24 -67.6005ww9_A mol:protein length:161 Putative starvation-induced DNA protecting protein/Ferritin and Dps  ali model follow..  20  13.FHATPEFGGNLQKVLVDLIELSLQGKQAHWNVVGSNFRDLHLQLDELVDFAREGSDTIAEEMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRRVHDAVDAEDPSTADLLHGLIDGLEKQAWLIRSENRK. 160
25 -67.5003t9j_A mol:protein length:164 Neutrophil-activating protein  ali model follow..  30  11.RGSHMKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIAQLGHHPLVTLSEALKLTRVKEETKTFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLQAHLA.. 158
26 -67.4004m32_A mol:protein length:168 Putative starvation-induced DNA protecting protein/Ferritin and Dps  ali model follow..  20  20.FHATPEFGGNLQKVLVDLIELSLQGKQAHWNVVGSNFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRRVHDAVDAEDPSTANLLHGLIDGLEKQAWLIRSENRK. 167
27 -67.4004m33_A mol:protein length:168 Putative starvation-induced DNA protecting protein/Ferritin and Dps  ali model follow..  20  20.FHATPEFGGNLQKVLVDLIELSLQGKQAHWNVVGSNFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRRVHDAVDAEDPSTADLLDGLIDGLEKQAWLIRSENRK. 167
28 -66.7002xgw_A mol:protein length:199 PEROXIDE RESISTANCE PROTEIN  ali model follow..  30  38.ASKNEKTKAVLNQAVADLSVAASIVHQVHWYMRGPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTKTVAQHLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLFTAAKTEAEKTIWMLQAERGQG 188
29 -66.6002yjj_A mol:protein length:161 AFP  ali model follow..  22  15.PEVAAAAAQFLTPVVHKMQALVVNGKQAHWNVRGSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEKTSTAVPAGFAQWQDEIKAIVSDIDAALVDLQAAIDGLDE-VDLTSQDVAIEIKRGVDKDRWFLLAHLAE. 161
30 -65.8002c2f_A mol:protein length:207 DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  28  55.EKEFQTVAETLQRNLATTISLYLKFKKYHWDIRGRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETRDARTQVADLVQDLSRVGKGYRDDSQACDEANDPVTADMYNGYAATIDKIRWMLQAIMDDE 204
31 -65.6005xgo_A mol:protein length:200 DNA protection during starvation protein,Bacterioferritin  ali model follow..  23  31.DSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDHNVQDHLKELADRYAIVANDVRKA---IGEAKDDDTADILTAASRDLDKFLWFIECNLDLI 177
32 -65.0004cy9_A mol:protein length:168 DPSA  ali model follow..  22  14.REAAGRLIGVLRLRLHALNDLHLTLKHVHWNVVGPHFIAVHEMIDPQVDQVRDMADDVAERIAALGGVAQGTPGALVAERKWDDYSIGRDAIAHLGALDVVYTGVVEGMRAAVEEAGK-IDPATEDLLIGQLRDLEQFQWFVRAHLESA 162
33 -64.7004cyb_A mol:protein length:173 PUTATIVE DNA PROTECTION PROTEIN  ali model follow..  19  18.MDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGEEVPSMLSRLLEAHELILTECHDAAARTQEYGDGTNDLLVSEVLRTNELQAWFVAEHLVDT 168
34 -62.7002c2j_A mol:protein length:211 DNA-BINDING STRESS RESPONSE PROTEIN  ali model follow..  17  42.TEDLKKSVQALQNTLTELQALQLQTKQAHWNVSGTLWYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGLDDAQVIQFFTYQYETVGQRIHQRVGDVEK-VDPTTANLLQEVEHIIEKYQWQMRAFLQNT 190
35 -62.6001jre_A mol:protein length:167 DNA PROTECTION DURING STARVATION PROTEIN  ali model follow..  22  23.DSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALICHLATMAERAVQLGGVALGTTQVINSKTPLKSYPLDINVQDHLKELADRYAIVANDVRKAI---GEAKDDDTADILTAASRDLDKFLWFIESNIE.. 167
36 -62.5001uvh_A mol:protein length:183 STARVATION-INDUCED DNA PROTECTING PROTEIN  ali model follow..  23  11.DKKASDVADLLQKQLSTYNDLHLTLKHVHWNVVGPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVEDTVQAHLAALDLVYNGVIEDTRKSIEKLED-LDLVSQDLLIAHAGELEKFQWFVRAHLESA 159
37 -62.3001dps_A mol:protein length:167 DPS  ali model follow..  22  23.DSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDINVQDHLKELADRYAIVANDVRKAI---GEAKDDDTADILTAASRDLDKFLWFIECNIE.. 167
38 -62.3004dyu_A mol:protein length:170 DNA protection during starvation protein  ali model follow..  22  26.EHVKVATIKRLNQMVIQFIDLSLITKQAHWNMRGANFVAVHEMLDGFRTALTDHLDTFAERAVQLGGVALGTAQVINDKTPLKSYPTNISVQEHLKALAERYAIVANDIRKAI---TEVEDENSADMFTAASRDLDKFLWFIESNIE.. 170
39 -61.7003ak8_A mol:protein length:167 DNA protection during starvation protein  ali model follow..  23  23.ESDKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDINVQDHLKELADRYAVVANDVRKAI---GEAKDEDTADIFTAASRDLDKFLWFIESNIE.. 167
40 -52.5001zuj_A mol:protein length:179 hypothetical protein Llacc01001955  ali model follow..  17  19IDHHKPTAGAMLSHVLSNIFYEKISLMQAGLYAKSANY---RIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKFIENDPKWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELAIRKLYGYNLSIIPYFAGELGKT 168
41 -52.4001zs3_A mol:protein length:182 Lactococcus lactis MG1363 DpsA  ali model follow..  13  20IDHHKPTAGAMLGHVLSNLFIENIRLTQAGIYAKSPVK---CEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFITEDPKWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAGVVELYGYNLQVIRNLAGDLGKS 169
42 -49.7002vzb_A mol:protein length:170 PUTATIVE BACTERIOFERRITIN-RELATED PROTEIN  ali model follow..  15  12.KLDVKSLIDQLNAALSEEWLAYYQYWVGALVVEGAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFELARCKYSPTAFDSVSLLNQNVSSERCAILRYQEIANFTNG-KDYTTCDIAKHILAEEEEHEQDLQDYLTD. 159
43 -41.7003e2c_A mol:protein length:158 Bacterioferritin  ali model follow..  23  2..KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLP--------NLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDERGHIDWLRTELDL. 140
44 -41.5001bcf_A mol:protein length:158 BACTERIOFERRITIN  ali model follow..  23  2..KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLP--------NLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDL. 140
45 -41.1004cvp_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  23  3..KGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYRESIDEMKHADRYIERILFLEGLP--------NLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVRDYVSRDMMIEILRDEEGHIDWLETELDL. 141
46 -41.0001sof_A mol:protein length:156 Bacterioferritin  ali model follow..  18  2..KGDKIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLP--------NLQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDL. 140
47 -40.8002qqy_A mol:protein length:149 Sigma B operon  ali model follow..  20  4MSHDVKELIEGLNEDLAGEYSAIIMYNHNAATVSGIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIPLRVKQAEDV---------REMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLND. 143
48 -40.7004tof_A mol:protein length:158 Bacterioferritin  ali model follow..  20  2..KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLP--------NLQDLGKLLIGENTQEMLQSDLNLELCATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGL. 140
49 -40.4003qb9_A mol:protein length:174 Bacterioferritin  ali model follow..  16  4..QGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLP--------NYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLEL. 142
50 -40.4003is7_A mol:protein length:158 Bacterioferritin  ali model follow..  20  2..KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLP--------NLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGL. 140
51 -40.1005d8x_A mol:protein length:158 Ferroxidase  ali model follow..  20  2..KGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGAP--------NLQDLGKLLIGANTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGL. 140
52 -39.9005zur_A mol:protein length:158 Bacterioferritin  ali model follow..  17  2..KGDKTVIQFLNKQLTNELTAINQYFLHARMLNHWGFDKLGKHEYEESIGEMKHADRLIARIFMLDGLP--------NLQDLHKLLIGEDVPELLACDLKLEQAAHATVREAIAHCESVRDYVSRDLFQDILDDTEEHIDYLETQIDL. 140
53 -39.8001jgc_A mol:protein length:161 bacterioferritin  ali model follow..  18  2..KGDAKVIEFLNAALRSELTAISQYWVHFRLQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHP--------NLQKLDPLRIGEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISL. 140
54 -39.7003fvb_A mol:protein length:182 Bacterioferritin  ali model follow..  19  17..KGEPKVIERLNEALFLELGAVNQYWLHYRLLNDWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFP--------NLQTVSPLRIGQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDL. 155
55 -39.6004am2_A mol:protein length:159 BACTERIOFERRITIN  ali model follow..  17  2..KGDQKVIEYLNRGLRSELTAVSQYWLHYRMLEDWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLP--------NLQTLDPLRIGQTVKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNLFEELMGDEEHHIDFLETQLDL. 140
56 -39.3002wtl_A mol:protein length:173 BACTERIOFERRITIN  ali model follow..  16  6..QGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLP--------NYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLEL. 144
57 -39.2003bkn_A mol:protein length:161 Bacterioferritin  ali model follow..  17  2..QGDPDVLKLLNEQLTSELTAINQYFLHSKMQDNWGFTELAEHTRAESFEEMRHAETITDRILLLDGLP--------NYQRLFSLRVGQTLREQFEADLAIEYEVLERLKPGIVLCREKQDATSARLLEQILADEETHIDYLETQLQL. 140
58 -39.1003gvy_A mol:protein length:161 Bacterioferritin  ali model follow..  15  2..QGDAKVIEYLNAALRSELTAVSQYWLHYRLQEDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHP--------NLQRLNPLRIGQTLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDL. 140
59 -38.9003r2h_A mol:protein length:154 Bacterioferritin  ali model follow..  18  2..QGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPD---------DIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLDTEEDHAYWLEQQLG.. 139
60 -38.6002clb_A mol:protein length:188 DPS-LIKE PROTEIN  ali model follow..  13  22...DIKKLVDKLVKATAAEFTTYYYYTILRMHLTGMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACSLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYG-KDPRTYDLAQRILQEEIEHEAWFLELLYG. 169
61 -38.5005xx9_A mol:protein length:167 Bacterioferritin  ali model follow..  17  2..QGDPEVIEFLNEQLTAELTAINQYFLHAKLQDHKGWTKLAKYTRAESFDEMRHAEVLTDRILLLDGLP--------NYQRLFHVRVGQSVTEMFQADREVELEAIDRLRRGIEVMRAKHDITSANVFEAILADEEHHIDYLETQLDL. 140
62 -36.9001nf4_A mol:protein length:179 bacterioferritin  ali model follow..  16  6.EDRKAKVIEVLNKARAMELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEP--------TTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSH. 145
63 -30.1004di0_A mol:protein length:144 Rubrerythrin  ali model follow..  11  6AQLKGSKTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGHAHGHLEYLEAVGDPA-------------TGLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWFETLAKAERSHANRYTKALDG. 141
64 -28.7001j30_A mol:protein length:144 144aa long hypothetical rubrerythrin  ali model follow..  9  2KDLKGTKTAENLKQGFIGESMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD-----------PATDKPIGTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAEKFQNVLKQ. 139
65 -23.9001yux_A mol:protein length:202 Nigerythrin  ali model follow..  11  23.KTSVGSTLENLKAAIAGETGAHAKYTAFAKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGY--------EKPTVAAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAERYLAAYND. 162
66 -22.2001b71_A mol:protein length:191 PROTEIN (RUBRERYTHRIN)  ali model follow..  11  2KSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIV---------AAFPAGIIADTHANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARN. 141
67 -21.0003qz3_A mol:protein length:184 Ferritin  ali model follow..  15  12....SQAMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALP--------ILGAIAAPRHDASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDK. 149
68 -20.8003sid_A mol:protein length:180 Symerythrin  ali model follow..  13  19DAVSHNNTDANAASSIEEMYECDCMYPTFAEIARRSGQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAELVSTIESQIDAVASDSRGLRRALETALEVETIESQKYPAFAKLAAEQGNMEVATAFEAIVKSETKHANWVKRALEN. 175
69 -20.3004r42_A mol:protein length:236 Alr3090 protein  ali model follow..  12  14IGEANPRFAQLLLEQFGGATGELSAALQYWVQSFHVENAGIKDMLQDIAIEEFSHLEMVGKLIEAHTKNVDQTEAYKSTLFAVSYLNEGGDVVRDLRANIAAEAGARQTYEELIKLSP---DEGTKQTLVHLLTREISHTQMFMKALDS. 176
70 -20.2003oj5_A mol:protein length:189 Ferritin family protein  ali model follow..  11  5.EGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLR--------VEIPGVDTVRNQDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRV. 145
71 -18.8003kx9_A mol:protein length:173 Ferritin  ali model follow..  14  1MASISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGR--------VKLYAVEEPPSEDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEK. 142
72 -18.5004zlw_A mol:protein length:168 Ferritin  ali model follow..  11  1...GSEELLDLFNRQVTQEFTASQVYLSASIWFDQNDWEGMAAYMLAESAEEREHGLGFVDFANKRNIPI-----ELQAVPAPVSCAEWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNAEDKIGSILAK. 141
73 -18.5005ls9_A mol:protein length:173 Ferritin, putative  ali model follow..  13  1MASISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELCHAMKMFDFVSERGGR--------IFLQDIKKPDSEWSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEK. 142
74 -18.4001s3q_A mol:protein length:173 ferritin  ali model follow..  14  1MASISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGR--------VKLYAVEEPPSEWSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEK. 142
75 -18.4004xgs_A mol:protein length:165 Ferritin  ali model follow..  12  3....KPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRIN-------TVESPFAEYSSLDELFQETYKLEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDK. 140
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.