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Query: 2itm_A mol:protein length:484 Xylulose kinase, from PDB1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMALast
1 -136.0002itm_A mol:protein length:484 Xylulose kinase  ali model  100  1MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA 484
2 -128.0005vm1_A mol:protein length:491 Xylulokinase  ali model follow..  47  3MYLGLDLGTSGVKALLIDEAQNPVGAAHGELDVSRPHPGWSEQDPAQWIKACRTAIEALRAAHPFSAITGIGLSGQMHGATLLDAEDRVLRPCILWNDTRSYREAAELDAD-PAFRAITGNIVFPGFTAPKLVWVARNEADIFARIRKVLLPKDYLRLWLTGEYISDMSDSAGTSWLDTGARRWSAELLAKTGLGEGQMPQLVEGSEAAGCLRAELAAEWSLTSVIVAGGAGDNAASACGMGTVKPGHAFVSLGTSGVLFAANGAYQPKPESAVHAFCHALPRTWHQMGVILSAASALEWYSKIVGAT-PQSLDRELGETLKAPGSVTFLPYLSGERTPYNDAKIRGSFCGLEHEADRSALTQAVLEGVAFAIRDNLLALQSAGTEITSLTAVGGGSRSTYWLKAIATALNVPIALPEEGDFGAAFGAARLGLIAATGADPFTIC-TPPQTARTIEPEQALLSAYDEAYQRYHALYPALHAL.. 484
3 -127.0003ifr_A mol:protein length:508 Carbohydrate kinase, FGGY  ali model follow..  29  8QVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGDWRPGGICVTGMLPAVVLLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDAFLARTGNGVTQQLVTAKLRWIERHEPAVFGAIATVCGSYDYINMLLTGERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTGLPGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDP--RLYLDYHLVPGLYAPNGCMAATGSALNWLAKLLGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPL-GSAVGAAWVAAIGGGDDLGWDDVTALVRTGEKITPDPAKAEVYDRLYRDFSALYATLHPFFH 497
4 -125.0003gbt_A mol:protein length:504 Gluconate kinase  ali model follow..  24  5YIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-GKIAAISWSSQMHSLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFQIYRKTGMPMHPMAPIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCY-PADKTHYLLGGPVNNGGIVFNWARQTLADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQ-SGTLAAMFLARQALGLNQDLSEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYG 490
5 -125.0003hz6_A mol:protein length:511 Xylulokinase  ali model follow..  26  6YIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWWQSVDARRVSAIVLSGQMQNFLPLDQDHEPLHRAVLYSDKRPLKEAEEINARHGNLWSALENPMTAASILPKLVFWRASFPQAFGRLRHVVLAKDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVGGVSALAARQTGFVGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELLGMEK--VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLRREPASNILHPQPCDEGRRRRKFERFKQCVETLGRLD. 503
6 -118.0005ya0_A mol:protein length:540 Autoinducer-2 kinase  ali model follow..  23  17YLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLADVPGSMEFDLNKNWQLACECMRQALHNAGPEYIAAVSACSMREGIVLYNNEGAPIWA-CANVDARAAREVSELKELHNEVYRATGQTL-ALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFGIDTYTLLEEMASRVPPGSWG--VMPIFSDRMRFKTWYHAAPSFINLSIDCNKATLFRALEENAAIVSACNLQQIADSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKE-ATALGCAIAAGVGAGIFSSMAETGELVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVD 521
7 -115.0003i8b_A mol:protein length:515 Xylulose kinase  ali model follow..  27  6LVAGVDTSTQSCKVRVTDAETGELVRFGQ-----AKHPNGTSVDPSYWWSAFQEAAEQAGGL---DDVSALAVGGQQHGMVILDNQGNVIRDAMLWNDTSSAPQAAALIEKLGRWVKAVGSSPVASYTLTKVAWVAENEPENVKKIAAICLPHDWLSWRIAGALFTDRSDASGTIYYDAASNEYRRDLIAMVLAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGCLLAPGGGDNAMASLGLGMA-VGDVSISLGTSGVAAAISENPTYDLTGAVSGFADC-TGHYLPLACTINGSRILDAGRAALGVD-YDELAKLAFASKPGANGITLVPYFDGERTP-NRPNATATFSGMTLANTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDE-YVAIGAARQAAWVLSGETEPPAWQLTIDGVETGEPTEAVYEAYAKARGE............. 508
8 -113.0003qdk_A mol:protein length:572 Ribulokinase  ali model follow..  19  6YTIGVDYGTESGRAVLIDSNGQELADHVTPYRHIKLGHEWALQHPLDYVEVLTTSVPAVMKESGADDVIGIGVDFTACTMLPVDEEGQPLCLLALWKHHAAQDKANAINEMAEAFLPRYGGKISSEWMIAKVWQILDEAEDVYNRTDQFLEATDWIVSQMTGKIVKNSCTAGYKAIWHKREGYPSNEFFKALDPRLEHLGDIVPLGERAGGLLPEMAEKMGLPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGEKEQEVEGMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGGVNVHALLEEKASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGPQKNHLLMQIFADVTNREIKVAASKQ-TPALGAAMFASVAAGSYDSIEEAAKKMVKDETFKPIPEHVAIYEKLYQEYVTLHDYFGRGAN 543
9 -111.0003gg4_A mol:protein length:554 glycerol kinase  ali model follow..  20  6YFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQINPIQVKGLGFDATC-SLVVLDKEGNPLQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPNTWSNVGHLFDLPDFLTWRATKDETRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKGAPLGHGLSQRAASEMGLPGTAVSVSIIDAHAGTIGINANFDRRIALIGGTSTAHMAMSRSAHFISGIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRANPNLTGIITGLKLSTTPEDMYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLPEESE-AMLLGSAMMGTVAAGVFESLPEAMAMSRIGKTVTPQTNKIKYYDRKYRVFHQMYHDHMRYQA 541
10 -110.0002zf5_O mol:protein length:497 Glycerol kinase  ali model follow..  22  4FVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARPNQIAAIGVTNQRETTLVWDKDGKPLYNAIVWQCRRTAEMVEEIKREYGTIKEKTGLVPDAYFSASKLKWLLDNVPGLREKAEKFGTVDTFLIYRLTGEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLG----AEIPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEK-LVQIKELRVDGGATANDFLMQFQADILNRKVIRPVVKE-TTALGAAYLAGLAVDYWADTREIAELWKAERIFEPKMDE-KTRERLYKGWKEAVKRAMGWAK 489
11 -108.0003ezw_A mol:protein length:526 Glycerol kinase  ali model follow..  21  5YIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADSDQIAAIGITNQRETTIVWEKEGKPIYNAIVWQCRRTAEICEHLKRDGLEIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRFGTVDTWLIWKMTQGHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRI---PISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQASGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVRE-VTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMA.... 495
12 -107.0004bc2_A mol:protein length:538 XYLULOSE KINASE  ali model follow..  18  11CCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEDGLTVTSPVLMWVQALDIILEKMKAFDFSQVLALSGAGQQHGSIYWKAGAQQISDCPVWMDSSTTAQCRQLEAAVGALSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTERISLVSSFAASLFLGSYSPDYSDGSGMNLLQIQDKVWSQACLGACAPHEEKLSPPVPSCSVVGAISSYYVQRYGFPGCKVVAFTGDNPASLAGMR-LEEGDIAVSLGTSDTLFLWLQEPMPALEGHIFCNP-VDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPEIIGRHRFNTENHKVAAFPGDEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTAN-SACVGSAYRAGLAGGTDVPFSEVVKAPNPRLAATPSPGASQVYEALLPQYAKLEQRILSQTR 534
13 -106.0003flc_O mol:protein length:518 Glycerol kinase  ali model follow..  19  12YVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGPEAIAGIGITNQRETTVVWDKTGQPIANAIVWQSRQSSPIADQLKVDGHTIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNFGTIDSWLVWKLTDGHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRF-----SEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTEEPQLSDNDLLTTIGYGINGKYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLE-TTALGAAYLAGLAVGFWKDLDELKSMAEEGQMFTPEMPA-EERDNLYEGWKQAVAATQTFKF 505
14 -106.0003wxi_A mol:protein length:518 Glycerol kinase  ali model follow..  20  9YVGSIDQGTTSTRFIIFDERQRPVSVHQVPHTQHTPHPGWLEHDPMEIFRSACKCMSVAIAKASFRKIEAIGITNQRETTVAWDRTKEPLCYAPVWNDLRTYDITKKVTAELGGASKITGLPVSTYFAAFKMRWMLENVPAVADACRRFGTIDTWLMYKLSGGFVTDVTNASRTFLMDLRTRKWSPELCEKLKIPMETLPEIRSNSELFGYVETDCGVAAALERTPIMGSIGDQQSALFGNMCFEKGEAKNTYGTGCFLLMNVGEEARFSKHGLFQVGRDGPCYYALEGAIACAGATVEWMRRNMNLFSHITECEKLARSVPGTQGIVFVPAFSGLLAPYWDPSARGTIVGMTLKTTRAHVIRAALQAIALQLNDVVGSMRDAGLNLSSLRVDGGLSKNGLLMEIQASLLGVDILVPSMHE-TTALGAALCAGLAAGVWTSLEEVKAVENSWKTVSPSGSAME-REAMIAEWREALKRTK.... 514
15 -106.0004e1j_A mol:protein length:520 Glycerol kinase  ali model follow..  21  21YILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGANDIAAIGITNQRETVVVWDREGKPIHNAIVWQDRRTAAFCDKLKKKGLEFVKKTGLLLDPYFSGTKLNWLLSNVKGAQVRAAKFGTIDTFLIWRLTGGFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTDPSLFG----AAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLIAYRLDGETTYALEGSIFVAGAAVQWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKRNGNDTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILE-TTALGVAWLAGSRAGVWPNQEAFAKSWARDRRFEPHMDEATRKVKLKGWRSAVKRTLI.... 512
16 -105.0002d4w_A mol:protein length:504 glycerol kinase  ali model follow..  20  3YVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNHEDIAAVGITNQRETAVVWDKTGKPVYNAIVWQDTRTQKIVDELGGDEGAYKSIVGLPLATYFSGPKIKWILDNVEGAREKAEKFGNTDTWVLWNMTGGHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRGLV----PGVPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVGDAPAVYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMADSGVDLTELRVDGGMVANELLMQFQADQLGVDVVRPKVAE-TTALGAAYAAGIAVGFWKGEQDVIDNWAEDKRWSPSMESGE-RERLYRNWKKAVTKTMEWVD 499
17 -105.0003g25_A mol:protein length:501 Glycerol kinase  ali model follow..  20  7YILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDADQIAGIGITNQRETTVVWDKHGRPIYHAIVWQSRQTQSICSELKQQGYEFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENFGTIDTWLVWKLSGKHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSEVYGKTIDYHF-----QEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTDKAVKSESGLLTTIAYGIDGKYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQE-TTALGAAFLAGLAVGFWESKDDIAKNWKLEEKFDPKMDE-GEREKLYRGWKKAVEATQVFKT 500
18 -102.0002dpn_A mol:protein length:495 Glycerol kinase  ali model follow..  23  3FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAGEVLALGITNQRETTLLWDRKGKPLHNAIVWQDRRTTPLCEALRAKGLEFRERTGLLFDPYFSGTKLVWLLENVPGLKARAEGFGTVDTWLIWNLTGGHATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGA----PVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTKRPVLSEKGLLATVAWSLGGRYALEGSLFVAGAAVGWLKEVGLIRESAEVEALAASVE-DTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTE-TTALGAALMAGVGAGALSPEDVA-GRFREAERFLPTMPE-GRREALYRRWREAVERAKGWAR 493
19 -102.0002w41_A mol:protein length:507 GLYCEROL KINASE, PUTATIVE  ali model follow..  19  9VILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKSVIIKCIGITNQRETVIIWDRTGKPLYNAIVWLDTRVEELVTEFSAKYNNIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKIDDIGNINTWLIFNLTGNCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNSVLPEIKSNCSNFGLVK---SEHVPDLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLYKFNDNDKPKYALEGSIGTAGSGVSWLLKNKLIDDPSEA-SDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTSDIEMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKE-VTSLGAAVLAGLEVKIWDSLDSVKSLLRRSDAVFHSKMDDKKRKKKTSEWNKAVERTLI... 505
20 -99.5002cgj_A mol:protein length:489 L-RHAMNULOSE KINASE  ali model follow..  15  5NCVAVDLGASSGRVMLARYERECRSLTLREINGLHSQNGYVTWDVDSLESAIRLGLNKVCAA--GIAIDSIGIDTWGVDFVLLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLMPDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICPQGNEI----PVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITN---EGGAEGRYRVLKNIMGLWLLQRVLQQINDLPALIAATQALPACRFIINPNDDRFINPDSEIQAACREMAQPIPESDAELARCIFDSLALLYADVLHELAQRGEDFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPV--EASTLGNIGIQLMTLDELNNVDDFRQVVSTTTTFTPNPDSEAHYVALIHSTRQTKELCA.... 489
21 -95.2004c23_A mol:protein length:473 L-FUCULOSE KINASE FUCK  ali model follow..  16  9AVLAIDLGATSGRAIVGYLSENKLEEINRFSNLPIRVKGHLSWDIDFLLAKILESIRLANTS---YKILSIGIDTWGVDFGLIDNEGKLLLQPVHYRDERTKGVLKEISEMTEKLYSETGNQIMEINTLFQLFKARQESPDSFYKTNKILLMPDLFNYLLTGKFATEKSIASTTQLFDPRSQNWNQNILKLFELDSSLLPEIVSEGNVLGRIKEEYG----LGDIPVVNVCSHDTASAIVSVPKTEGSLFISSGTWSLVGVELTSPILTTESFSYGFTNEVGKDVITFLKNCTGLWIIEELRRSFERRKAYSFDDIRTMVEKEKENLPLIDTESTEFATESDMHKTLAYHHETREWTDGQLFKIVYESLAETYRKAIELLEELHKVYKRIYVIGGGARASYFNQMIADRTGKEVLT--GLTEATAVGNIVVQLIAMGQLKGMEEAHHVIEEFESYYSQKN........................ 473
22 -94.2005htj_A mol:protein length:436 Probable sugar kinase  ali model follow..  18  5VALGLAFGTSGARAIACDFDSDRSVSVSVTF------PKTSQNWPQVWREALWQLLTQIPADWR-SRIERIAIDGTSGTVLLCDREGQPQTEPLLYNQACPIDLADLADWV------PADHAALSSTSSLAKLWFWQQQFGALPPDWQILAQADWLSLQLHGCSQQSDYHNALKLGYSPDRERFSKNLLD--SELGALLPVVHEPGVAIGPILPAIAQEFGLSDCQICAGTTDSIAAFLASGAHQPGEAVTSLGSTIVLKLLSQVAVSDRLTGV--YSHKLGGYWLTGGASNCGGATLRQFFP-----DTELESLSCQIDPTKKSGLDYYPLPSGERFPIADPDRLPQLEPRP--ENPVQFLQGLLEGLTQVETLGYQRLQDLGTPLKRIWTAGGGAKNAVWQQLRQQAIGVPIAIAPNTE--AAFGTARLAAFGLAAFHSAGLKRTL.................................... 429
23 -88.4005htr_A mol:protein length:439 Putative xylulose kinase  ali model follow..  18  16LYLGMDFGTSGGRFTVIDEQGEIKAQGKREY------PPFMKEESMGWASSWKATLFSLLEDIPVSLVSSISLDGTSATTLILNSESGEVLCQPYLYNQSCPDALPEVKS----IAPANHTVCSGTSTLCKLVWWNTEVP--NRESAVLLHQADWLLWLLHGRLGVSDYNNALKVGYDPESESYPSWLLG--QPYSQLLPKVQAPGTSIGNLKESFTRQFGFPDCIVCTGTTDSIAAFLAARATEPGKAVTSLGSTLAIKLLSTKRVDDARYGV--YSHRLDDKWLVGGASNTGGAILRQLFS---DEQLERLSQEIN--PMVGSPLDYYPLQSGERFPIADPNLAPRLLPRP--ESDVEFLHGILESIARIEGKGYKLLKELGTEAEEVLTAGGGAKNDKWIKIRQRVLGLPVKKAVHTE--ASYGASLLALKGAKQNSGL.......................................... 439
24 -78.0003h6e_A mol:protein length:482 Carbohydrate kinase, FGGY  ali model follow..  15  7ATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPL-EIDGIRRLDAPDTGRWLLDVLSRYADH----PVTTIVPVGHGAGIAALT-DGRLAFPPLDYEQSIPEAVMADYRSQ-RDPFARTGSPALPDNIGSQLWWLDQLHPDVMANA-TLLPWAQYWAWFLTGRAVSEVTSGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDTVGALLPAIAERTGLSDVQVLAGLHDSNAALLAARGFDNEATVLSTGTWFIAMRLPATPVDTATLPEDCLVNVDVHGRPVPSARFMGGREIETLIEIDTRRKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHGRFAWINRP----EDWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPGLRPQGELVRI------EPLDTGSWADLDTYRN---RWQAEVEAAKVEEG 476
25 -11.6004eht_A mol:protein length:276 Activator of 2-hydroxyisocaproyl-CoA dehydratase  ali model follow..  16  2YTMGLDIGSTASKGVILKNGEDIVASETISSGTGT--------------TGPSRVLEKLYGKTGLAREDIKKVVVTGYGRMNYSDADKQISELSC-----HARGVNFIIPETRTIIDIGGQD-------AKVLKLDNN----------------------LLNFLMNDKCAAGTGRF--------DVMAKIIEVDVSEL----------GSISMNSQNEVSISSTCTVFAESE-VISHLSENAKIED---------------------------------------------------------------------------------------------------------------------IVAGIHTSVAKRVSSLVKRIGVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYA.................................................... 252
26 -10.8001hux_A mol:protein length:270 ACTIVATOR OF (R)-2-HYDROXYGLUTARYL-COA DEHYDRATASE  ali model follow..  17  4YTLGIDVGSTASKCIILKDGKEIVAKSLVA----------VGTGTSGPARSISEVLEN--AHMKKEDMAFTLATGYGRNSLEG-------------IADKQMSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMT---------------------NFQMNDKCAAGTGRF--------DVMANILEVKVSDL----------AELGAKSTKRVAISSTCTVFAESE-VISQLSKGTDKID---------------------------------------------------------------------------------------------------------------------IIAGIHRSVASRVIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYA.................................................... 254
27 -10.5003htv_A mol:protein length:310 D-allose kinase  ali model follow..  15  8VVAGVDMGATHIRFCLRTAEGETLHCEKKRTA---------EVIAPGLVSGIGEMIDEQLRRFN-ARCHGLVMG--FPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFS-------------------------------------------------RDVNLQLSWDVVENRLTQQLVLAAYLG------------------------TGMGFAVWMNGGAHGVAGELGHIPLGDMTQHCACGNPGCLETNC-----------------------------SGMALRRWYEQQPRNYPLRDLFVHAEN---------------------------------------APFVQSLLENAARAIATSINLFDP------DAVILGGGVMDAFPRETLVAMTVVRFIAASSSDFNGAQGAAILA.................................................... 297
28 -10.5004m7x_A mol:protein length:273 Type II pantothenate kinase  ali model follow..  16  1MKVGIDAGGTLIKIVQEQDNQRTFKTELT------------------------KNIDQVVEWLNQQQIEKLCLTGGNAGVIA-----------------------------------------------------------------------------------------------------------ENINIPAQIFVEFDAASQGLGILLKEQGHD-------------------------LADYIFANVGTGTSLHYFDGQ-----------------SQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRH-IYKDTEPPIPGDLTAANFGLDADFTPSNKLAAVIGVVGEVVTTMAITVARE--KTENIVYIGSSFHNN--VEDYTVLRGCKPYYVENGAFSGAIGALYLE.................................................... 266
29 -10.3005nro_A mol:protein length:611 Chaperone protein DnaK  ali model follow..  11  4.IIGIDLGTTN---------------------------------------------------------SCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKR-----QAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKK---TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRII---NEPTAAALAYGLDKGTGNRTIAGAFDISIIEIDEVDGEKTFEVLA----------TNGDTHLGGRLINYLVEEFKKDQ-EAAEKAKIELSSAQQTDVNLPYITAD-------ATGPKHMNIKVTRAKESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDV.......................................... 389
30 -10.3004nb4_A mol:protein length:285 Type II pantothenate kinase  ali model follow..  15  13MKVGIDAGGTLIKIVQEQDNQRTFKTELT------------------------KNIDQVVEWLNQQQIEKLCLTGGNAGVIA-----------------------------------------------------------------------------------------------------------ENINIPAQIFVEFDAASQGLGILLKEQGHDLA--------------------------YIFANVGTGTSLHYFDGQ-----------------SQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVDADFTPSNKLAAVIGVVGEVVTTMAITVARE--KTENIVYIGSSFHNN--VEDYTVLRGCKPYYVENGAFSGAIGALYLE.................................................... 278
31 -10.3004jn4_A mol:protein length:608 Chaperone protein DnaK  ali model follow..  11  4.IIGIDLGTTN---------------------------------------------------------SCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKR-----QAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKK---TAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRII---NEPTAAALAYGLDKGTGNRTIAGAFDISIIEIDEVDGEKTFEVLA----------TNGDTHLGGRLINYLVEEFKKDQ-EAAEKAKIELSSAQQTDVNLPYITAD-------ATGPKHMNIKVTRAKESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDV.......................................... 389
32 -10.2003c7n_A mol:protein length:668 Heat shock protein homolog SSE1  ali model follow..  13  6.PFGLDLGNNNSVLAVARNRG-----------------------------------------------------------IVVNEVSNRSTPSVVGFGPKNRYLGETGKN------KQTSNIKNTVANLKRIIGLDYHHPDFEQESKHF---KTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQ---YNIADAARIAGLNPVRIV---NDVTAAGVSYGIFKTDLAFVDIGHSSYTCSIMA-----KKGQLKVLGTACDKH---FGGRDFDLAITEHFADEFKTKAYNRILTAAEKLSANTNAPFSVESVMNDVD-VSSQLSREEL---------EELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLR............................................ 390
33 -9.9603d2e_A mol:protein length:675 Heat shock protein homolog SSE1  ali model follow..  13  4.PFGLDLGNNNSVLAVARNRG-----------------------------------------------------------IVVNEVSNRSTPSVVGFGPKNRYLGETGKN------KQTSNIKNTVANLKRIIGLDYHHPDFEQESKHF---KTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQ---YNIADAARIAGLNPVRIV---NDVTAAGVSYGIFKTDVAFVDIGHSSYTCSIMA-----KKGQLKVLGTACDKH---FGGRDFDLAITEHFADEFKTKAYNRILTAAEKLSANTNAPFSVESVMNDV-DVSSQLSREEL---------EELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLR............................................ 388
34 -9.7204j8f_A mol:protein length:561 Heat shock 70 kDa protein 1A/1B, Hsc70-interacting protein  ali model follow..  12  13.AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE-----RLIGDAAKNQVALNPQNTVFDA-LIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGET-------------------KAFYPEEISSMVLTKMKEI--AEAYLGYPVTNAVITVPA------YFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFE---VKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKD--------ISQNKRAVRRLRT--------ACERAKRTLSSSTQASLEIDSLF-EGIDFYTSITRARF---------EELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFGRDLNKSINPDEAVAYGAAVQAAILMGLESDLEIDNEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAID 436
35 -9.6302ews_A mol:protein length:287 Pantothenate kinase  ali model follow..  15  15MKVGIDAGGTLIKIVQEQDNQRTFKTELT------------------------KNIDQVVEWLNQQQIEKLCLTGGNAGVIA-----------------------------------------------------------------------------------------------------------ENINIPAQIFVEFDAASQGLGILLKEQGHDL-ADYIFANVGTGTSLHYFDGQSQRR-----------------------------------------VGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVDADFTPSNKLAAVIGVVGEVVTTMAITVAREFK-TENIVYIGSSFHNN--VEDYTVLRGCKPYYVENGAFSGAIGALYLE.................................................... 280
36 -9.5404kbo_A mol:protein length:385 Stress-70 protein, mitochondrial  ali model follow..  14  9.VVGIDLGTTN---------------------------------------------------------SCVAVMEGKQAKVLENAEGARTTPSVVAFTADGERLVGMPAKR-----QAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNV--------FKIV-------RASNGDAWVEAHGKLYSPSQIGAF-LGHTAKNAVITVPAYFNDSQRQATKDAGISGLNVLRVINEPTAAALAYGLDKSEDKVIAVGTFDISILEIQKGVFEVKS--------------TNGDTFLGGALLRHIVKEFKRET-EAAEKAKCELSSSVQTDINLPYLTMD-------SSGPKHLNMKLTRAQEGIVTDLIRRTIAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAG............................................... 384
37 -9.3105fpn_A mol:protein length:640 HEAT SHOCK-RELATED 70 KDA PROTEIN 2  ali model follow..  13  8.AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTE-----RLIGDAAKNQVAMNPTNTIFDA-LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGET-------------------KTFFPEEISSMVLTKMKEI--AEAYLGGKVHSAVITVPA------YFNDSQRQATKDAGTITGLNVLRI-------------PTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQAS-------IEIDSLY-EGVDFYTSITRARF---------EELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFGKELNKSINPDEAVAYGAAVQAAILIG............................................... 386
38 -9.2002aa4_A mol:protein length:289 Putative N-acetylmannosamine kinase  ali model follow..  16  3.TLAIDIGGTKLAAALIGADGQIRDRRELPTP--------ASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHN---------LLHFPLVKTLE-------------------------------------QLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVS---------------------------------------TGVGGGVVSGCGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIA-----------------------------SGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLI----------------------------------HRSARTLARLIADIKATT-----DCQCVVVGGSVGLAEGYLALVETYLHVDLLAAHYRHDAGLLGAALLA.................................................... 286
39 -9.1203eo3_A mol:protein length:333 Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase  ali model follow..  15  15SALAVDLGGTNLRVAIVSMKGEIVKKYTQF----------NPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIWNSVDLRTPLSD-------------------------------------------------TLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITG--------------------------TGIGGGIIHQHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYA-----------------------------SGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAK-------------------AQSILRTAGTALGLGVVNILHTMNP------SLVILSGVLASHYIHIVKDVIRQQALSSVQDVDDPALLGAASMV.................................................... 320
40 -9.0502qm1_A mol:protein length:326 Glucokinase  ali model follow..  19  7KIIGIDLGGTTIKFAILTTDGVVQQKWSIETN--------ILEDGKHIVPSIIESIRHRIDLMKKEDFVGIGMGTPG----SVDIEKGTVVGAYNLNWTTVQPVKEQIESALG----------------------------------------------IPFALDNDANVAALGERWKGAGENNPDVIFITLG--------------------------TGVGGGIVAAGGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVS-----------------------------SATGVVRVARHLSEEFAGDSELKQAIDDGQDVSSDVFEFAEKGDHFAL-------------------MVVDRVCFYLGLATGNLGNTLNP------DSVVIGGGAGEFLRSRVEKYF-STKIKLAELGNEAGVIGAASLA.................................................... 319
41 -9.0204rtf_D mol:protein length:546 Chaperone protein DnaK  ali model follow..  15  30.AVGIDLGTTNSVVSVLEGGDPVVVANSEGSRTT----------------------------------SIVAFARNGEVLV-----GQPAKNQAVTNVDRTVRSVKRHMGSDWSIEIDGKKYTAPEISARILMKLKRD-------------AEAYLGEDITDAVIT-------PAYFNDAQRQATKDAGQIAGLNVLRI------------VNEPTAAALAY-GLDKGEKEQRILVFDLGGGTFDVSLLEIGEGVVEVRATSGDNHLGGDDWDQRVVDWLVDKFKGTSGIDLTKDKMAMQRLREAAEKAKIELSSSQSTS-------INLPYITV------DADKNPLFLDEQLTRAEQRITQDLLDRTRKPFQSVIADTGISVSEIDHVVLVGGSTRMPAVTDLVKELTGKEPNKGVNPDEVVAVGAALQAGVLKGEVKDV.......................................... 389
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.